| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yajQ [C]
Identifier: 15603521
GI number: 15603521
Start: 1863807
End: 1864298
Strand: Reverse
Name: yajQ [C]
Synonym: PM1656
Alternate gene names: 15603521
Gene position: 1864298-1863807 (Counterclockwise)
Preceding gene: 15603522
Following gene: 15603520
Centisome position: 82.58
GC content: 37.4
Gene sequence:
>492_bases ATGCCTTCTTTTGATATCGTATCTGAAATTACCTTACATGAAGTGCGCAATGCCGTCGAAAATGCCAATCGTGATTTGAC GAATCGCTGGGATTTTCGCAATGTACAAGCCGCGATTGAATTAAATGAAAAAAATGAAAGTATTAAAGTATCTAGTGAGT CTGATTTTCAAGTTGAGCAATTAGTGGATATTTTACGCAACGCTTGTATTAAGCGTGGCATTGATTCAGGTTCCTTAGAT ATTCCAACAGAATATGAGCATAGTGGGAAAACCTATAGTAAAGAGATTAAATTAAAACAAGGGATTGCGTCAGAAATGGC GAAGAAAATCACCAAGTTAATTAAGGATTCCAAACTGAAAGTACAGACGCAGATTCAAGGTGAACAAGTTCGTGTGACCG GAAAATCAAGGGATGACTTGCAAGCTGTGATTCAATTGGTGAAAGGCGCAGAATTAGGGCAGCCATTCCAATTTAATAAT TTTAGAGATTAG
Upstream 100 bases:
>100_bases ACAAGCCAAAGTTGTGGTAAACTTTGCAGACTTTAGCGCACTGTTATGTTTACTGAGTGCAAATGATAAATTGGTTAAAG CAAATAAGGAGTAATGATTT
Downstream 100 bases:
>100_bases CATGTGATGCTGTGATCTAGAAAGCCGAGTGAGAACTCGGCTTTGTTGTATCATGATACGCAATCTCGTGTGATTGCTTT TCGTTATTTACTCATGATTT
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQLVDILRNACIKRGIDSGSLD IPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLKVQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNN FRD
Sequences:
>Translated_163_residues MPSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQLVDILRNACIKRGIDSGSLD IPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLKVQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNN FRD >Mature_162_residues PSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQLVDILRNACIKRGIDSGSLDI PTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLKVQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNNF RD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=66.2576687116564, Blast_Score=226, Evalue=7e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1656_PASMU (Q9CKG2)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246595.1 - ProteinModelPortal: Q9CKG2 - SMR: Q9CKG2 - GeneID: 1245003 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1656 - NMPDR: fig|272843.1.peg.1657 - HOGENOM: HBG290634 - OMA: LQFTNYR - ProtClustDB: PRK05412 - BioCyc: PMUL272843:PM1656-MONOMER - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18493; Mature: 18362
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQ CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHH LVDILRNACIKRGIDSGSLDIPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNNFRD EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQ CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHH LVDILRNACIKRGIDSGSLDIPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLK HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNNFRD EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100