Definition Pasteurella multocida subsp. multocida str. Pm70, complete genome.
Accession NC_002663
Length 2,257,487

Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 15603521

GI number: 15603521

Start: 1863807

End: 1864298

Strand: Reverse

Name: yajQ [C]

Synonym: PM1656

Alternate gene names: 15603521

Gene position: 1864298-1863807 (Counterclockwise)

Preceding gene: 15603522

Following gene: 15603520

Centisome position: 82.58

GC content: 37.4

Gene sequence:

>492_bases
ATGCCTTCTTTTGATATCGTATCTGAAATTACCTTACATGAAGTGCGCAATGCCGTCGAAAATGCCAATCGTGATTTGAC
GAATCGCTGGGATTTTCGCAATGTACAAGCCGCGATTGAATTAAATGAAAAAAATGAAAGTATTAAAGTATCTAGTGAGT
CTGATTTTCAAGTTGAGCAATTAGTGGATATTTTACGCAACGCTTGTATTAAGCGTGGCATTGATTCAGGTTCCTTAGAT
ATTCCAACAGAATATGAGCATAGTGGGAAAACCTATAGTAAAGAGATTAAATTAAAACAAGGGATTGCGTCAGAAATGGC
GAAGAAAATCACCAAGTTAATTAAGGATTCCAAACTGAAAGTACAGACGCAGATTCAAGGTGAACAAGTTCGTGTGACCG
GAAAATCAAGGGATGACTTGCAAGCTGTGATTCAATTGGTGAAAGGCGCAGAATTAGGGCAGCCATTCCAATTTAATAAT
TTTAGAGATTAG

Upstream 100 bases:

>100_bases
ACAAGCCAAAGTTGTGGTAAACTTTGCAGACTTTAGCGCACTGTTATGTTTACTGAGTGCAAATGATAAATTGGTTAAAG
CAAATAAGGAGTAATGATTT

Downstream 100 bases:

>100_bases
CATGTGATGCTGTGATCTAGAAAGCCGAGTGAGAACTCGGCTTTGTTGTATCATGATACGCAATCTCGTGTGATTGCTTT
TCGTTATTTACTCATGATTT

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MPSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQLVDILRNACIKRGIDSGSLD
IPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLKVQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNN
FRD

Sequences:

>Translated_163_residues
MPSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQLVDILRNACIKRGIDSGSLD
IPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLKVQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNN
FRD
>Mature_162_residues
PSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQLVDILRNACIKRGIDSGSLDI
PTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLKVQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNNF
RD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=66.2576687116564, Blast_Score=226, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1656_PASMU (Q9CKG2)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246595.1
- ProteinModelPortal:   Q9CKG2
- SMR:   Q9CKG2
- GeneID:   1245003
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1656
- NMPDR:   fig|272843.1.peg.1657
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- ProtClustDB:   PRK05412
- BioCyc:   PMUL272843:PM1656-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18493; Mature: 18362

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHH
LVDILRNACIKRGIDSGSLDIPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNNFRD
EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSFDIVSEITLHEVRNAVENANRDLTNRWDFRNVQAAIELNEKNESIKVSSESDFQVEQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCHHH
LVDILRNACIKRGIDSGSLDIPTEYEHSGKTYSKEIKLKQGIASEMAKKITKLIKDSKLK
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
VQTQIQGEQVRVTGKSRDDLQAVIQLVKGAELGQPFQFNNFRD
EEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100