| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15603314
Identifier: 15603314
GI number: 15603314
Start: 1637518
End: 1638060
Strand: Reverse
Name: 15603314
Synonym: PM1449
Alternate gene names: NA
Gene position: 1638060-1637518 (Counterclockwise)
Preceding gene: 15603316
Following gene: 15603313
Centisome position: 72.56
GC content: 47.15
Gene sequence:
>543_bases ATGAAACAATGCATTGCATTCATGGCAATTTTAGCCTTATCGCTCAGCGCAATCAGTGAGGCGAAAGGCGGTCGTGGAGT GCGTTCGAGTGGGTATTCTCGCCCCGTTGCGACAAAACCTGCGCCAGCACCGAAACAAACGCAAACTCAACAACAAAGCC AGCAACCTGATGCGACCTTTGGTCAACAAAATATGCAAAATACGGCGACGAATACACCGAACAACCCAAATAATCGTTTA GCTAGCTTTGCGACGGGGGCCGCAGCGGGTTACTTATTAAGTGAAGTGTTGTCACCAACAGAAGCCCAAGCGCAAATGGC AACAGATCAACCTTTACAACCGCTGAATGCACAACCCAACCAGAGTACTGTTGCCACCTTTAAAGCCTTGGATCAGAGTA ATCCCGCTTGGGTTGGTATGGCGGGCGAACAAAATTTATTTTGCTTAAATGGCGCACTGTATTTGGTCAACAAAAATAAC CATCAAATAGGTGCAGTCACGGATAATCAGGCACAAGCGATTGCTTGTCAGGTCACACAATAA
Upstream 100 bases:
>100_bases ATTGGATGCCTTTGGGGTAAGCGCGCAGGCTATTTTTTATTTTCCGCTTTTCTGTATAATGACCCTTTTATGATAAGTAA CGATTTGACAAGGAATCTGA
Downstream 100 bases:
>100_bases CCTATGCTAAAAGCGGGCAGCAGCTCGCTTTTCTTACTTTTATTTTCTGAGTGTTACAGTATGCTTAATCAACAAATCAG CCAAATTATTGCCACAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKQCIAFMAILALSLSAISEAKGGRGVRSSGYSRPVATKPAPAPKQTQTQQQSQQPDATFGQQNMQNTATNTPNNPNNRL ASFATGAAAGYLLSEVLSPTEAQAQMATDQPLQPLNAQPNQSTVATFKALDQSNPAWVGMAGEQNLFCLNGALYLVNKNN HQIGAVTDNQAQAIACQVTQ
Sequences:
>Translated_180_residues MKQCIAFMAILALSLSAISEAKGGRGVRSSGYSRPVATKPAPAPKQTQTQQQSQQPDATFGQQNMQNTATNTPNNPNNRL ASFATGAAAGYLLSEVLSPTEAQAQMATDQPLQPLNAQPNQSTVATFKALDQSNPAWVGMAGEQNLFCLNGALYLVNKNN HQIGAVTDNQAQAIACQVTQ >Mature_180_residues MKQCIAFMAILALSLSAISEAKGGRGVRSSGYSRPVATKPAPAPKQTQTQQQSQQPDATFGQQNMQNTATNTPNNPNNRL ASFATGAAAGYLLSEVLSPTEAQAQMATDQPLQPLNAQPNQSTVATFKALDQSNPAWVGMAGEQNLFCLNGALYLVNKNN HQIGAVTDNQAQAIACQVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1449_PASMU (Q9CL00)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246388.1 - PRIDE: Q9CL00 - GeneID: 1244796 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1449 - NMPDR: fig|272843.1.peg.1450 - HOGENOM: HBG296850 - OMA: RRYCIAG - ProtClustDB: CLSK870485 - BioCyc: PMUL272843:PM1449-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18990; Mature: 18990
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQCIAFMAILALSLSAISEAKGGRGVRSSGYSRPVATKPAPAPKQTQTQQQSQQPDATF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC GQQNMQNTATNTPNNPNNRLASFATGAAAGYLLSEVLSPTEAQAQMATDQPLQPLNAQPN CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC QSTVATFKALDQSNPAWVGMAGEQNLFCLNGALYLVNKNNHQIGAVTDNQAQAIACQVTQ CHHHHHHHHHCCCCCEEEEECCCCCEEEECCEEEEEECCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure MKQCIAFMAILALSLSAISEAKGGRGVRSSGYSRPVATKPAPAPKQTQTQQQSQQPDATF CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC GQQNMQNTATNTPNNPNNRLASFATGAAAGYLLSEVLSPTEAQAQMATDQPLQPLNAQPN CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC QSTVATFKALDQSNPAWVGMAGEQNLFCLNGALYLVNKNNHQIGAVTDNQAQAIACQVTQ CHHHHHHHHHCCCCCEEEEECCCCCEEEECCEEEEEECCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100