Click here to switch to the map view.

The map label for this gene is tex [C]

Identifier: 15603312

GI number: 15603312

Start: 1634815

End: 1635129

Strand: Reverse

Name: tex [C]

Synonym: PM1447

Alternate gene names: 15603312

Gene position: 1635129-1634815 (Counterclockwise)

Preceding gene: 15603313

Following gene: 15603307

Centisome position: 72.43

GC content: 42.54

Gene sequence:

>315_bases
ATGGATTCAAACAAAATCACCTTCTTCACCCGCTTTGAACAGGATATTCTGGCGGGTCGTAAAACTATCACCATTCGTGA
TAAATCTGAATCGTCTTTTCAGCCAAATCAAATTTTGGCGGTTTATACCAATGAAACGGATCGCTTTTTTGCCAATATCA
AGGTGTTATCGGTGACCCCGATTCATTTCGAGGCGTTATCAGAGGCACACGCGCAACAGGAAAATATGACACTCCCCGAG
CTTCGTCAGGTGATTAAGGAAATTTATCCACAAGAGGATTGCTTTTGGGTGATTGCGTTTGAGTTGGTGGATTAA

Upstream 100 bases:

>100_bases
CAATCCAGCAACCAAAGGGCGTGATCGCAACACCGCTAACAGCGCGATGGGTAATGCTTTTGCCGATGCGTTGAAGAATT
GGAAGAAATAAGGGGATTAT

Downstream 100 bases:

>100_bases
TACCCCATATAAACAAAGTGCGGTCAATTTTGTTAAAATATCGACCGCACTTTTTCACGATTAAGGCGTACTACTCTTCC
TCTTTTTCCCATTCGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDSNKITFFTRFEQDILAGRKTITIRDKSESSFQPNQILAVYTNETDRFFANIKVLSVTPIHFEALSEAHAQQENMTLPE
LRQVIKEIYPQEDCFWVIAFELVD

Sequences:

>Translated_104_residues
MDSNKITFFTRFEQDILAGRKTITIRDKSESSFQPNQILAVYTNETDRFFANIKVLSVTPIHFEALSEAHAQQENMTLPE
LRQVIKEIYPQEDCFWVIAFELVD
>Mature_104_residues
MDSNKITFFTRFEQDILAGRKTITIRDKSESSFQPNQILAVYTNETDRFFANIKVLSVTPIHFEALSEAHAQQENMTLPE
LRQVIKEIYPQEDCFWVIAFELVD

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family

Homologues:

Organism=Escherichia coli, GI1789267, Length=103, Percent_Identity=51.4563106796116, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1447_PASMU (Q9CL02)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_246386.1
- ProteinModelPortal:   Q9CL02
- SMR:   Q9CL02
- GeneID:   1244794
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM1447
- NMPDR:   fig|272843.1.peg.1448
- HOGENOM:   HBG296598
- OMA:   RDEAESH
- ProtClustDB:   PRK04980
- BioCyc:   PMUL272843:PM1447-MONOMER
- HAMAP:   MF_00684
- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314
- PIRSF:   PIRSF029143

Pfam domain/function: PF04266 ASCH; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 12159; Mature: 12159

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNKITFFTRFEQDILAGRKTITIRDKSESSFQPNQILAVYTNETDRFFANIKVLSVTP
CCCCEEEEEEECCHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEECC
IHFEALSEAHAQQENMTLPELRQVIKEIYPQEDCFWVIAFELVD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEECC
>Mature Secondary Structure
MDSNKITFFTRFEQDILAGRKTITIRDKSESSFQPNQILAVYTNETDRFFANIKVLSVTP
CCCCEEEEEEECCHHHHCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEEEECC
IHFEALSEAHAQQENMTLPELRQVIKEIYPQEDCFWVIAFELVD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100