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The map label for this gene is ygiW [H]

Identifier: 15603036

GI number: 15603036

Start: 1366510

End: 1366884

Strand: Reverse

Name: ygiW [H]

Synonym: PM1171

Alternate gene names: 15603036

Gene position: 1366884-1366510 (Counterclockwise)

Preceding gene: 15603038

Following gene: 15603034

Centisome position: 60.55

GC content: 36.8

Gene sequence:

>375_bases
ATGATGAAAAAATTAATCGCATTGGCCTCAATTTTAGCTATTTCAGGTATGGCCGTCGCAAAAGGTGGTTTCCAAAACAA
TACGAATAATGCAGGTGGTGGTTTTGGACCCAATGCTGGTATCAATAGCGTGAGAGCTGCATTAAATGCACAAGATGATA
TGCCAGTTTCTATCGAAGGCTATATTGTTAGACAAATTGATGGTGATGAATTTATTTTCCGTGATGTAGCAGGTTCAGAA
ATCCGTATTGATGTCAGTGATCGTGCTTGGAATGGGCAAACTATTCAACCGAATGATTTGATCATTATTCAAGGCAAAGT
CGATAAAGAGTGGAATAAAACCGATATCGATGTAAAAAATATCATTAAGAAATAA

Upstream 100 bases:

>100_bases
TTGTTAAGTTTTTCTTAATATTTGTATTGTTTAATACACTCATCAAAAGGCAAGTAGCTTTTTGAACCTTCATTTTTTAT
TAACATTTATATAGGAACAG

Downstream 100 bases:

>100_bases
TCCGTGCAGTGCGACAATGTCATATTAGTCGCACTTTTTCTTTTCTACCTCTTCTATATCTAAAATGCGTGCTTGCTGTT
CCTCTGTTGCTTCCATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MMKKLIALASILAISGMAVAKGGFQNNTNNAGGGFGPNAGINSVRAALNAQDDMPVSIEGYIVRQIDGDEFIFRDVAGSE
IRIDVSDRAWNGQTIQPNDLIIIQGKVDKEWNKTDIDVKNIIKK

Sequences:

>Translated_124_residues
MMKKLIALASILAISGMAVAKGGFQNNTNNAGGGFGPNAGINSVRAALNAQDDMPVSIEGYIVRQIDGDEFIFRDVAGSE
IRIDVSDRAWNGQTIQPNDLIIIQGKVDKEWNKTDIDVKNIIKK
>Mature_124_residues
MMKKLIALASILAISGMAVAKGGFQNNTNNAGGGFGPNAGINSVRAALNAQDDMPVSIEGYIVRQIDGDEFIFRDVAGSE
IRIDVSDRAWNGQTIQPNDLIIIQGKVDKEWNKTDIDVKNIIKK

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1709 [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=128, Percent_Identity=40.625, Blast_Score=99, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 13402; Mature: 13402

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKLIALASILAISGMAVAKGGFQNNTNNAGGGFGPNAGINSVRAALNAQDDMPVSIEG
CHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECC
YIVRQIDGDEFIFRDVAGSEIRIDVSDRAWNGQTIQPNDLIIIQGKVDKEWNKTDIDVKN
EEEEEECCCEEEEEECCCCEEEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCHHH
IIKK
HHCC
>Mature Secondary Structure
MMKKLIALASILAISGMAVAKGGFQNNTNNAGGGFGPNAGINSVRAALNAQDDMPVSIEG
CHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEECC
YIVRQIDGDEFIFRDVAGSEIRIDVSDRAWNGQTIQPNDLIIIQGKVDKEWNKTDIDVKN
EEEEEECCCEEEEEECCCCEEEEEECCCCCCCCEECCCCEEEEECCCCCCCCCCCCCHHH
IIKK
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]