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The map label for this gene is ycdQ [C]

Identifier: 15603005

GI number: 15603005

Start: 1340498

End: 1341511

Strand: Reverse

Name: ycdQ [C]

Synonym: PM1140

Alternate gene names: 15603005

Gene position: 1341511-1340498 (Counterclockwise)

Preceding gene: 15603006

Following gene: 15603004

Centisome position: 59.42

GC content: 29.59

Gene sequence:

>1014_bases
ATGAGCTATTTGGATCAACCATTAGTTTCAGTATTAATCTGTGCTTATAATGCAGATAAATACATAGAAGAGTGTATTGA
CGCGATTTTAAATCAAACATATAAAAATCTAGAAATAGTTGTTGTGAATGATGGTTCAACAGACACTACTTTGTCAAAGC
TTCATTATTTTGCTGGAAAAGATCCTAGAATTAAAATTATTAATAATGAAGAAAATAAGGGTTTCATTGCTTCGCTAAAT
ATAGGGATTGCTTCTATCAATGGTGATTATTTAGCGCGAACAGATGCTGATGATATTACGAAACCTGAATGGATTGAAAA
AATTTTAGGATATATGTTGTCTCATCCTCAAATTATTGCAATGGGATCGTATCTAACTATTTTGTCAGAAGATGGGAATG
GGAGTAATTTAGCTAATTATTATGAACATGGTGACGAGTGGAGAAATCCTTTAAGTCATAGAGAGATTGTTGAGGCAATG
TTATTCCGTAATCCTATTCATAATAACTCGATGATTGTAAAAAGTACTGTCTTTAGAGAGCATGGATTACGCTTTGATCC
TGCTTATCAACATACTGAAGATTACCAATTTTGGTTAGAAGTGAGCCGTTTGGGAGAATTGGCAAATTATCCTGAATCTT
TAGTTTATTATCGTCTACACAATACACAAACTTCTTCTTTACATAATAAATATCAAAATCTCATGGCAAAGAAAATTAGA
AAAAGAGCGATCAATTATTATTTGCAAGATTTGGGTGTTATTCATAGGCTAGGTGAAGATATATTTTTCCATGATATTGA
AACGATTCAGGCAGAACTGGCTAGCTTATCACTTTTAGATAATTGTATTATTAAAAGAATACTGTATGATTGTTATTTAT
CATTAGTGGATAATAAATTAATAAATATTCTTTATTTTTTGAGAGATAAAAATAATTCATATTTCAATAAAAAACAGAAA
ATAAAGATTATCAAAAGAATTATCCGTCCTTATAAATATGAATCTGTATTGTGA

Upstream 100 bases:

>100_bases
TAAAAAAGAGAAAAGAGCGAGCAGAAAAAAATGCAAAAATGAAATTGAAATGTATTGTGAAATTTGAATAAAAATATCTT
TTTATTTGAGGGATGTCGTT

Downstream 100 bases:

>100_bases
GATGATATATGAATATTTTATTTGTTTCTGATGATGTTTATGCTAGACATCTGGTGGTTGCGATTAAAAGCATTATAAAT
CATAATGAAAAAGGTATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSYLDQPLVSVLICAYNADKYIEECIDAILNQTYKNLEIVVVNDGSTDTTLSKLHYFAGKDPRIKIINNEENKGFIASLN
IGIASINGDYLARTDADDITKPEWIEKILGYMLSHPQIIAMGSYLTILSEDGNGSNLANYYEHGDEWRNPLSHREIVEAM
LFRNPIHNNSMIVKSTVFREHGLRFDPAYQHTEDYQFWLEVSRLGELANYPESLVYYRLHNTQTSSLHNKYQNLMAKKIR
KRAINYYLQDLGVIHRLGEDIFFHDIETIQAELASLSLLDNCIIKRILYDCYLSLVDNKLINILYFLRDKNNSYFNKKQK
IKIIKRIIRPYKYESVL

Sequences:

>Translated_337_residues
MSYLDQPLVSVLICAYNADKYIEECIDAILNQTYKNLEIVVVNDGSTDTTLSKLHYFAGKDPRIKIINNEENKGFIASLN
IGIASINGDYLARTDADDITKPEWIEKILGYMLSHPQIIAMGSYLTILSEDGNGSNLANYYEHGDEWRNPLSHREIVEAM
LFRNPIHNNSMIVKSTVFREHGLRFDPAYQHTEDYQFWLEVSRLGELANYPESLVYYRLHNTQTSSLHNKYQNLMAKKIR
KRAINYYLQDLGVIHRLGEDIFFHDIETIQAELASLSLLDNCIIKRILYDCYLSLVDNKLINILYFLRDKNNSYFNKKQK
IKIIKRIIRPYKYESVL
>Mature_336_residues
SYLDQPLVSVLICAYNADKYIEECIDAILNQTYKNLEIVVVNDGSTDTTLSKLHYFAGKDPRIKIINNEENKGFIASLNI
GIASINGDYLARTDADDITKPEWIEKILGYMLSHPQIIAMGSYLTILSEDGNGSNLANYYEHGDEWRNPLSHREIVEAML
FRNPIHNNSMIVKSTVFREHGLRFDPAYQHTEDYQFWLEVSRLGELANYPESLVYYRLHNTQTSSLHNKYQNLMAKKIRK
RAINYYLQDLGVIHRLGEDIFFHDIETIQAELASLSLLDNCIIKRILYDCYLSLVDNKLINILYFLRDKNNSYFNKKQKI
KIIKRIIRPYKYESVL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=117, Percent_Identity=35.042735042735, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1790044, Length=231, Percent_Identity=28.1385281385281, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1788372, Length=119, Percent_Identity=31.9327731092437, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 39268; Mature: 39137

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYLDQPLVSVLICAYNADKYIEECIDAILNQTYKNLEIVVVNDGSTDTTLSKLHYFAGK
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCC
DPRIKIINNEENKGFIASLNIGIASINGDYLARTDADDITKPEWIEKILGYMLSHPQIIA
CCEEEEEECCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEE
MGSYLTILSEDGNGSNLANYYEHGDEWRNPLSHREIVEAMLFRNPIHNNSMIVKSTVFRE
ECCEEEEEECCCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
HGLRFDPAYQHTEDYQFWLEVSRLGELANYPESLVYYRLHNTQTSSLHNKYQNLMAKKIR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
KRAINYYLQDLGVIHRLGEDIFFHDIETIQAELASLSLLDNCIIKRILYDCYLSLVDNKL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INILYFLRDKNNSYFNKKQKIKIIKRIIRPYKYESVL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SYLDQPLVSVLICAYNADKYIEECIDAILNQTYKNLEIVVVNDGSTDTTLSKLHYFAGK
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCC
DPRIKIINNEENKGFIASLNIGIASINGDYLARTDADDITKPEWIEKILGYMLSHPQIIA
CCEEEEEECCCCCCEEEEEEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEE
MGSYLTILSEDGNGSNLANYYEHGDEWRNPLSHREIVEAMLFRNPIHNNSMIVKSTVFRE
ECCEEEEEECCCCCCCHHHHHHCCHHHCCCCHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
HGLRFDPAYQHTEDYQFWLEVSRLGELANYPESLVYYRLHNTQTSSLHNKYQNLMAKKIR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
KRAINYYLQDLGVIHRLGEDIFFHDIETIQAELASLSLLDNCIIKRILYDCYLSLVDNKL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INILYFLRDKNNSYFNKKQKIKIIKRIIRPYKYESVL
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]