| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602986
Identifier: 15602986
GI number: 15602986
Start: 1320204
End: 1320575
Strand: Direct
Name: 15602986
Synonym: PM1121
Alternate gene names: NA
Gene position: 1320204-1320575 (Clockwise)
Preceding gene: 15602985
Following gene: 15602988
Centisome position: 58.48
GC content: 44.89
Gene sequence:
>372_bases ATGGCACTCAAAAGATGTTGTTCTTATTCTGGGTGGGAATTGCAGACCCGAGACAATCAATTCCGCTGTATCCATAACTT CTTGTTTATCAGGTACCTGTTATCGTACGGTGAGACGGTGGCAGAGCTTACATTTCGCTGTAAGTACGTTGTTTTTACAC CACAATTAGCCTGTTTATGCTTTCCAGCAGTCCGAGCTAATGACCCTCGAAGTTATGGTTGTGCGTTGGAGTTCTATCCC TTTCGGGTGCTTGTTGAATGGTATTTTAGGTGGACGTCAGCACTGTTTTCGATTTACCTACTTGAACAACACCCCACCCT TTGCTATGATTTGACTTGTCGAGGGTCTGGTCATGGCAAAGACGCACAATGA
Upstream 100 bases:
>100_bases CCATACGATCGCAACGCGAAAAAACCGTTAAGCAATCCACAAATCCACAACGCCACAAAGAGCGCTGTCCTTTTGCTTGC GTTCAGTCAACCGAGTGTGA
Downstream 100 bases:
>100_bases ACAGATTATACGAAAACGCCCGATTTTAAAAGTCGGGCGTTTTTGTTTTTATAAAAATTTTCTTATTTTTTGCAAAAGTT GCTGATCTAACTCACATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MALKRCCSYSGWELQTRDNQFRCIHNFLFIRYLLSYGETVAELTFRCKYVVFTPQLACLCFPAVRANDPRSYGCALEFYP FRVLVEWYFRWTSALFSIYLLEQHPTLCYDLTCRGSGHGKDAQ
Sequences:
>Translated_123_residues MALKRCCSYSGWELQTRDNQFRCIHNFLFIRYLLSYGETVAELTFRCKYVVFTPQLACLCFPAVRANDPRSYGCALEFYP FRVLVEWYFRWTSALFSIYLLEQHPTLCYDLTCRGSGHGKDAQ >Mature_122_residues ALKRCCSYSGWELQTRDNQFRCIHNFLFIRYLLSYGETVAELTFRCKYVVFTPQLACLCFPAVRANDPRSYGCALEFYPF RVLVEWYFRWTSALFSIYLLEQHPTLCYDLTCRGSGHGKDAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1121_PASMU (Q9CLT8)
Other databases:
- EMBL: AE004439 - RefSeq: NP_246058.1 - GeneID: 1244468 - GenomeReviews: AE004439_GR - KEGG: pmu:PM1121 - NMPDR: fig|272843.1.peg.1121 - BioCyc: PMUL272843:PM1121-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14498; Mature: 14367
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKRCCSYSGWELQTRDNQFRCIHNFLFIRYLLSYGETVAELTFRCKYVVFTPQLACLC CCCHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEECCCHHHHH FPAVRANDPRSYGCALEFYPFRVLVEWYFRWTSALFSIYLLEQHPTLCYDLTCRGSGHGK HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC DAQ CCC >Mature Secondary Structure ALKRCCSYSGWELQTRDNQFRCIHNFLFIRYLLSYGETVAELTFRCKYVVFTPQLACLC CCHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEECCCHHHHH FPAVRANDPRSYGCALEFYPFRVLVEWYFRWTSALFSIYLLEQHPTLCYDLTCRGSGHGK HHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC DAQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100