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The map label for this gene is yebC [C]

Identifier: 15602845

GI number: 15602845

Start: 1150567

End: 1151307

Strand: Reverse

Name: yebC [C]

Synonym: PM0980

Alternate gene names: 15602845

Gene position: 1151307-1150567 (Counterclockwise)

Preceding gene: 15602846

Following gene: 15602844

Centisome position: 51.0

GC content: 42.11

Gene sequence:

>741_bases
ATGGCAGGTCATAGTAAGTGGGCTAACATTAAACACCGTAAAGCCGCACAAGATGCACAACGTGGCAAGATTTTTACTAA
ATTAATTCGTGAATTGGTGACAGCTGCGAAGTTAGGTGGTGGTGATGTCAATGCAAACCCGCGTTTACGTACTGCGGTGG
ATAAAGCCTTATCAAGTAATATGACGCGTGATACCATTAACCGTGCAATTGAGCGTGGTGTGGGCGGTGGTGATGACACC
AATATGGAAACCAAAATCTATGAAGGATATGGTCCTGGTGGTACGGCAGTGATGGTGGAATGCTTAAGTGATAATGCTAA
CCGTACAATTTCACAAGTTAGACCGAGTTTTACAAAATGTGGCGGTAATCTAGGAACGGAAGGCTCTGTTGGTTATTTGT
TCAGCAAAAAAGGGTTAATTTTAATTACTTCTGGTGATGAAGATGTTATTATGGAAGCCGCAATTGAAGCTGGTGCGGAT
GACGTACAAGTCCAAGAAGATGGGAGTTTCGAAGTGTATACTGCTTGGGAAGAACTTGGTGCTGTCCGTGATGGTATTGA
ATCCGCAGGGATTAAAATTGATAATGCCGAAGTTACCATGATTCCGTCTACGACTGTTGAACTTGACGCAGAAACTGCAC
CGAAATTGTTAAAGCTGATTGATATGCTAGAAGATTGTGATGATGTACAAAATGTTTATCATAATGGCGAAATCAGTGAT
GAAATAGCGGCTATGCTATAG

Upstream 100 bases:

>100_bases
GCATTAATCGAAAAGTATTTAGTGAAACAACCATTGGATAGTGGCATCTTACAGAGAATAACGAACGAGTATAATTATTT
AATAAAGAAGGAAATTGAGA

Downstream 100 bases:

>100_bases
ATTATTCTATTAAATGCGATTTATTTAATAGTGATTTTACCGATTGTATCGTGCATACAATTGATCATTTATTTTAGGAG
AACTTATGAAATTAACTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVNANPRLRTAVDKALSSNMTRDTINRAIERGVGGGDDT
NMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILITSGDEDVIMEAAIEAGAD
DVQVQEDGSFEVYTAWEELGAVRDGIESAGIKIDNAEVTMIPSTTVELDAETAPKLLKLIDMLEDCDDVQNVYHNGEISD
EIAAML

Sequences:

>Translated_246_residues
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVNANPRLRTAVDKALSSNMTRDTINRAIERGVGGGDDT
NMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILITSGDEDVIMEAAIEAGAD
DVQVQEDGSFEVYTAWEELGAVRDGIESAGIKIDNAEVTMIPSTTVELDAETAPKLLKLIDMLEDCDDVQNVYHNGEISD
EIAAML
>Mature_245_residues
AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVNANPRLRTAVDKALSSNMTRDTINRAIERGVGGGDDTN
METKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILITSGDEDVIMEAAIEAGADD
VQVQEDGSFEVYTAWEELGAVRDGIESAGIKIDNAEVTMIPSTTVELDAETAPKLLKLIDMLEDCDDVQNVYHNGEISDE
IAAML

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=30.7692307692308, Blast_Score=115, Evalue=3e-26,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=76.8292682926829, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1788294, Length=232, Percent_Identity=39.6551724137931, Blast_Score=163, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=25.9259259259259, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=33.7121212121212, Blast_Score=122, Evalue=4e-29,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=29.8804780876494, Blast_Score=92, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26343; Mature: 26212

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVNANPRLRTAVDKALSSN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHEEHHCCCHHHHHHHCCHHHHC
GGNLGTEGSVGYLFSKKGLILITSGDEDVIMEAAIEAGADDVQVQEDGSFEVYTAWEELG
CCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHH
AVRDGIESAGIKIDNAEVTMIPSTTVELDAETAPKLLKLIDMLEDCDDVQNVYHNGEISD
HHHHHHHHCCEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EIAAML
HHHHCC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVNANPRLRTAVDKALSSN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC
CCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHEEHHCCCHHHHHHHCCHHHHC
GGNLGTEGSVGYLFSKKGLILITSGDEDVIMEAAIEAGADDVQVQEDGSFEVYTAWEELG
CCCCCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHCCCCCEEEECCCCEEEEECHHHHH
AVRDGIESAGIKIDNAEVTMIPSTTVELDAETAPKLLKLIDMLEDCDDVQNVYHNGEISD
HHHHHHHHCCEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EIAAML
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA