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The map label for this gene is dcd [H]

Identifier: 15602816

GI number: 15602816

Start: 1122737

End: 1123321

Strand: Reverse

Name: dcd [H]

Synonym: PM0951

Alternate gene names: 15602816

Gene position: 1123321-1122737 (Counterclockwise)

Preceding gene: 15602817

Following gene: 15602815

Centisome position: 49.76

GC content: 41.37

Gene sequence:

>585_bases
ATGAGATTATGTGATACTGATATTGAACGTTATTTAGATGATGGCATTATCGCGTTAACCCCTCGACCGAGTAATGACAA
AATTAATGGTGCAACGATCGATGTTCGTTTAGGGAATTCTTTCCGCGTTTTCCGTGAGCATTCCGCACCTTATATTGATC
TCAGTGGTCCAAAAGAACAAGTCTCAGCCCAATTGGAATCGGTGATGAGTGAAGAAATTCTGATTGGTGAAAATGACGCC
TTCTTTTTACATCCTGGTGAGTTGGCATTAGCCACAACACTTGAGTCGGTTAAGTTACCGGCAAATATTATTGGGTGGTT
AGATGGACGTTCTTCACTTGCGCGTTTAGGTTTAATGGTACATGTGACGGCACATCGTATTGATCCCGGTTGGGAAGGAC
GAATCGTATTGGAATTTTTTAATTCAGGTAAGTTACCCTTAGCACTACGTCCCAATATGGTGATTGGTGCGTTAAGTTTT
GAAATTTTGAGTGGCTATGCTGCGCGTCCATATAGCAGTCGTAAGAATGCAAAATACAAAAATCAGCAAAGTGCGGTAGC
CAGTCGTATTGATGAGGATAAATAA

Upstream 100 bases:

>100_bases
ATCGTGATCCCGCGAGGTGGTAAAAATCGAATTGCCATTAATATGTTAAAAGCACAGATTAGACAACTTTTGGGAAAACG
TTAACAGTAAGGAGCTGAGA

Downstream 100 bases:

>100_bases
AATGTTGAAAAAGATCGCCATCAGTTTTTGTGCTGTCATTGTGGCGATCTTTGCGCTTGCATATTGGCAAATTGATCGTG
TCAATGCTGTCTTAACCAAC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MRLCDTDIERYLDDGIIALTPRPSNDKINGATIDVRLGNSFRVFREHSAPYIDLSGPKEQVSAQLESVMSEEILIGENDA
FFLHPGELALATTLESVKLPANIIGWLDGRSSLARLGLMVHVTAHRIDPGWEGRIVLEFFNSGKLPLALRPNMVIGALSF
EILSGYAARPYSSRKNAKYKNQQSAVASRIDEDK

Sequences:

>Translated_194_residues
MRLCDTDIERYLDDGIIALTPRPSNDKINGATIDVRLGNSFRVFREHSAPYIDLSGPKEQVSAQLESVMSEEILIGENDA
FFLHPGELALATTLESVKLPANIIGWLDGRSSLARLGLMVHVTAHRIDPGWEGRIVLEFFNSGKLPLALRPNMVIGALSF
EILSGYAARPYSSRKNAKYKNQQSAVASRIDEDK
>Mature_194_residues
MRLCDTDIERYLDDGIIALTPRPSNDKINGATIDVRLGNSFRVFREHSAPYIDLSGPKEQVSAQLESVMSEEILIGENDA
FFLHPGELALATTLESVKLPANIIGWLDGRSSLARLGLMVHVTAHRIDPGWEGRIVLEFFNSGKLPLALRPNMVIGALSF
EILSGYAARPYSSRKNAKYKNQQSAVASRIDEDK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=193, Percent_Identity=73.0569948186529, Blast_Score=300, Evalue=5e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR010550 [H]

Pfam domain/function: PF06559 DCD [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21468; Mature: 21468

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLCDTDIERYLDDGIIALTPRPSNDKINGATIDVRLGNSFRVFREHSAPYIDLSGPKEQ
CCCCHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEECCCCHHH
VSAQLESVMSEEILIGENDAFFLHPGELALATTLESVKLPANIIGWLDGRSSLARLGLMV
HHHHHHHHHHCCEEECCCCEEEEECCCEEEEEHHHHHCCCHHHEEECCCHHHHHHHCEEE
HVTAHRIDPGWEGRIVLEFFNSGKLPLALRPNMVIGALSFEILSGYAARPYSSRKNAKYK
EEEEEECCCCCCCEEEEEEECCCCCEEEECCCEEEEHHHHHHHCCCCCCCCCCCCCCCCC
NQQSAVASRIDEDK
CHHHHHHHHCCCCC
>Mature Secondary Structure
MRLCDTDIERYLDDGIIALTPRPSNDKINGATIDVRLGNSFRVFREHSAPYIDLSGPKEQ
CCCCHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCEEECCCCHHH
VSAQLESVMSEEILIGENDAFFLHPGELALATTLESVKLPANIIGWLDGRSSLARLGLMV
HHHHHHHHHHCCEEECCCCEEEEECCCEEEEEHHHHHCCCHHHEEECCCHHHHHHHCEEE
HVTAHRIDPGWEGRIVLEFFNSGKLPLALRPNMVIGALSFEILSGYAARPYSSRKNAKYK
EEEEEECCCCCCCEEEEEEECCCCCEEEECCCEEEEHHHHHHHCCCCCCCCCCCCCCCCC
NQQSAVASRIDEDK
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA