| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is eda [H]
Identifier: 15602812
GI number: 15602812
Start: 1117632
End: 1118294
Strand: Reverse
Name: eda [H]
Synonym: PM0947
Alternate gene names: 15602812
Gene position: 1118294-1117632 (Counterclockwise)
Preceding gene: 15602813
Following gene: 15602811
Centisome position: 49.54
GC content: 44.49
Gene sequence:
>663_bases ATGGCTTACCGCACCGCAGAGATCGTTGAAAAATTACGCGCTTGGAAAGTCATTCCTGTGATTGCGTTAGATAATCCGGA GACGATTTTACCGCTAGCAGATTGTTTAGCTGAACATGGTTTACCTGTCGTAGAAATCACGTTTCGTTCAAGTGCAGCGG AACAAGCTATTCGTTTACTTAAACAACAACGCCCAGCTATTTTTGTCGCGGCTGGCACGGTGCTTAACCCAGAACAAGTG ATGCAAGCCAAGAATGCGGGGGCAGATTGTGTGGTGACACCGGGATTTAATCCAAAAATTGTTGAACTGTGTCAACGTTT ATCCTTCCCCATTATCCCCGGCGTGAATAACCCAATGGCAATTGAAGCTGCGCTTGAAATGGGCATTCATGCTGTAAAAT TTTTCCCCGCGGAAGCTTCGGGCGGGGTGGCAATGATTAAAGCATTGTTAGGACCTTATCCGATGTTACAAATTATGCCA ACAGGGGGCATTCATTTACAAAATATCTGTGATTATTTGGCAATTCCTAATGTGGTCGCTTGTGGTGGTTCTTGGTTTGT AGAAAAACAGCTCATTCAACAACAAAATTGGCAAGAAATTGGGCGTTTGACACAAGCGGTGATGGCACAGATAAACAACG AAAAAGGGCGGTCATTTTTGTGA
Upstream 100 bases:
>100_bases TGAAATTCAGAAAATTAATTTTGCTTCGGATTTGTCAGATGCTTTTAATAAAATCCGCGTTTTTGAACAACAAGCATAAT ACGGTTTAGAGGAGAAAAAC
Downstream 100 bases:
>100_bases AAATTTTTTCACTTTGGGTTTGTGTGAATCTTTTATAAGATAAACAGTCTAATGGAGTTCTTATCGGTACTTTATGAGGA AAGCTAACATGAATTTTAAT
Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAYRTAEIVEKLRAWKVIPVIALDNPETILPLADCLAEHGLPVVEITFRSSAAEQAIRLLKQQRPAIFVAAGTVLNPEQV MQAKNAGADCVVTPGFNPKIVELCQRLSFPIIPGVNNPMAIEAALEMGIHAVKFFPAEASGGVAMIKALLGPYPMLQIMP TGGIHLQNICDYLAIPNVVACGGSWFVEKQLIQQQNWQEIGRLTQAVMAQINNEKGRSFL
Sequences:
>Translated_220_residues MAYRTAEIVEKLRAWKVIPVIALDNPETILPLADCLAEHGLPVVEITFRSSAAEQAIRLLKQQRPAIFVAAGTVLNPEQV MQAKNAGADCVVTPGFNPKIVELCQRLSFPIIPGVNNPMAIEAALEMGIHAVKFFPAEASGGVAMIKALLGPYPMLQIMP TGGIHLQNICDYLAIPNVVACGGSWFVEKQLIQQQNWQEIGRLTQAVMAQINNEKGRSFL >Mature_219_residues AYRTAEIVEKLRAWKVIPVIALDNPETILPLADCLAEHGLPVVEITFRSSAAEQAIRLLKQQRPAIFVAAGTVLNPEQVM QAKNAGADCVVTPGFNPKIVELCQRLSFPIIPGVNNPMAIEAALEMGIHAVKFFPAEASGGVAMIKALLGPYPMLQIMPT GGIHLQNICDYLAIPNVVACGGSWFVEKQLIQQQNWQEIGRLTQAVMAQINNEKGRSFL
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1788156, Length=179, Percent_Identity=35.7541899441341, Blast_Score=134, Evalue=4e-33,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 23938; Mature: 23807
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS00160 ALDOLASE_KDPG_KHG_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRTAEIVEKLRAWKVIPVIALDNPETILPLADCLAEHGLPVVEITFRSSAAEQAIRLL CCCCHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH KQQRPAIFVAAGTVLNPEQVMQAKNAGADCVVTPGFNPKIVELCQRLSFPIIPGVNNPMA HHCCCEEEEEECCEECHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCHH IEAALEMGIHAVKFFPAEASGGVAMIKALLGPYPMLQIMPTGGIHLQNICDYLAIPNVVA HHHHHHHCHHHEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCCEEE CGGSWFVEKQLIQQQNWQEIGRLTQAVMAQINNEKGRSFL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AYRTAEIVEKLRAWKVIPVIALDNPETILPLADCLAEHGLPVVEITFRSSAAEQAIRLL CCCHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH KQQRPAIFVAAGTVLNPEQVMQAKNAGADCVVTPGFNPKIVELCQRLSFPIIPGVNNPMA HHCCCEEEEEECCEECHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCHH IEAALEMGIHAVKFFPAEASGGVAMIKALLGPYPMLQIMPTGGIHLQNICDYLAIPNVVA HHHHHHHCHHHEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHCCCEEE CGGSWFVEKQLIQQQNWQEIGRLTQAVMAQINNEKGRSFL CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]