| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is mpl [H]
Identifier: 15602794
GI number: 15602794
Start: 1096528
End: 1097901
Strand: Reverse
Name: mpl [H]
Synonym: PM0929
Alternate gene names: 15602794
Gene position: 1097901-1096528 (Counterclockwise)
Preceding gene: 15602799
Following gene: 15602793
Centisome position: 48.63
GC content: 42.43
Gene sequence:
>1374_bases ATGACAGTAAAGCATATCCACATCTTAGGTATTTGTGGCACGTTTATGGGCGGTGTCGCCATGATTGCGAAACAACTTGG TTATAAAGTGACAGGCTCCGATACCCATGTTTATCCGCCAATGAGCACATTTTTGATGGAAAATGGAATTGAGATTATTC CACATTTTGATCCGACACAATTACAGCCAGCGCCGGATATGGTGATCATTGGTAACGCAATGAAACGCGGTAATCCTTGC GTAGAATATGTATTGGAACATCATTTACCCTATACCTCAGGTCCACAATGGTTACATGATCATTTGTTGCGTGATCGTTG GGTATTGGCTGTATCGGGTACCCATGGAAAAACTACAACAACTGGCATGTTAAGTTGGATTTTAGATAAGTGCGGTCTTA AACCTGGTTTTTTAATTGGGGGGATCTCGGGCAATTTTGGTATATCCGCTCGACTTGGGGAAAGTGATTATTTCGTGATT GAAGCCGATGAGTATGATACGGCATTTTTTGATAAACGTTCTAAATTTGTCCATTATAATCCTAAGACCTTGATTATTAA TAATATCGGGTTTGATCATGCGGATATTTTTGATGATCTGAAAGCCATTCAGCGCCAATTTCATCATATGATTCGTACGA TGCCAGCCAGTGGACGCATTCTTTCTGTGGCGAATGAGCCGAATGTGAAAGCAACCTTAGACATGGGTTGTTGGTCGCAA CAACAGTTTTTAGGTCAGGATCAAGACTGGTATGCTGAACGGATCAGCCATGATTGCACGCAATTTGGTGTTTTCTACCA AGGCGAGAAAATGGCAGAGGTGTATTGGAATGTCGTCGGTCAACATAATATGCACAATGCATTAATGGCGATTGCTGCGG CACATCATGTCGGGATTTCAATTGCTGAGGCATGTCAGGCACTTGCCACGTTTATTAGCCCGAAACGCCGTTTAGAAGTG AAAGGGCAAGTTAATGGCATTACGGTTTATGATGATTTTGCTCATCATCCGACAGAAATTCTGGCAACATTGACCGCACT TCGTGACAAAGTTGGAGGGGGCGTGCGTATTTTGGCAGTACTTGAGCCACGTTCAAATACTATGAAAATGGGCGTGCATA AAGACGAGATTGCGCCTGCTTTAGGTAGAGCGGATAACGTATTCTTATTTCAGCCTGAAAATATTGGTTGGGATGTGGTG GATATTGTGAGTCAGTGTGTCCAGCCAGCAGTTTGGAATATGAATCTTGATAAGTTGGTGGAGATGATTGCTGATGAAGC GAAACCAACAGATCATATTTTGGTGATGTCAAATGGCAGTTTCGGGGGGATCCATCAAAAACTGTTAGACAAGTTAGCTT TAAAAACAGAATAA
Upstream 100 bases:
>100_bases TTTATTATAGCAACCTTAGGTTTATCATAGAAAAGTCGAATGTTAACAATGTGATCTTCGACACATTTTTTATGACAATA GATGACATAGAGATAAAAAA
Downstream 100 bases:
>100_bases AGTACTTGCTTAAATGAAAGTATAAAAGGCAAACGTGAGTTTGCCTTTATTTGTTTGAGAGAGACTTTCATGCTTGTGAT TTGTGAGTCTGTTTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Murein peptide ligase [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTVKHIHILGICGTFMGGVAMIAKQLGYKVTGSDTHVYPPMSTFLMENGIEIIPHFDPTQLQPAPDMVIIGNAMKRGNPC VEYVLEHHLPYTSGPQWLHDHLLRDRWVLAVSGTHGKTTTTGMLSWILDKCGLKPGFLIGGISGNFGISARLGESDYFVI EADEYDTAFFDKRSKFVHYNPKTLIINNIGFDHADIFDDLKAIQRQFHHMIRTMPASGRILSVANEPNVKATLDMGCWSQ QQFLGQDQDWYAERISHDCTQFGVFYQGEKMAEVYWNVVGQHNMHNALMAIAAAHHVGISIAEACQALATFISPKRRLEV KGQVNGITVYDDFAHHPTEILATLTALRDKVGGGVRILAVLEPRSNTMKMGVHKDEIAPALGRADNVFLFQPENIGWDVV DIVSQCVQPAVWNMNLDKLVEMIADEAKPTDHILVMSNGSFGGIHQKLLDKLALKTE
Sequences:
>Translated_457_residues MTVKHIHILGICGTFMGGVAMIAKQLGYKVTGSDTHVYPPMSTFLMENGIEIIPHFDPTQLQPAPDMVIIGNAMKRGNPC VEYVLEHHLPYTSGPQWLHDHLLRDRWVLAVSGTHGKTTTTGMLSWILDKCGLKPGFLIGGISGNFGISARLGESDYFVI EADEYDTAFFDKRSKFVHYNPKTLIINNIGFDHADIFDDLKAIQRQFHHMIRTMPASGRILSVANEPNVKATLDMGCWSQ QQFLGQDQDWYAERISHDCTQFGVFYQGEKMAEVYWNVVGQHNMHNALMAIAAAHHVGISIAEACQALATFISPKRRLEV KGQVNGITVYDDFAHHPTEILATLTALRDKVGGGVRILAVLEPRSNTMKMGVHKDEIAPALGRADNVFLFQPENIGWDVV DIVSQCVQPAVWNMNLDKLVEMIADEAKPTDHILVMSNGSFGGIHQKLLDKLALKTE >Mature_456_residues TVKHIHILGICGTFMGGVAMIAKQLGYKVTGSDTHVYPPMSTFLMENGIEIIPHFDPTQLQPAPDMVIIGNAMKRGNPCV EYVLEHHLPYTSGPQWLHDHLLRDRWVLAVSGTHGKTTTTGMLSWILDKCGLKPGFLIGGISGNFGISARLGESDYFVIE ADEYDTAFFDKRSKFVHYNPKTLIINNIGFDHADIFDDLKAIQRQFHHMIRTMPASGRILSVANEPNVKATLDMGCWSQQ QFLGQDQDWYAERISHDCTQFGVFYQGEKMAEVYWNVVGQHNMHNALMAIAAAHHVGISIAEACQALATFISPKRRLEVK GQVNGITVYDDFAHHPTEILATLTALRDKVGGGVRILAVLEPRSNTMKMGVHKDEIAPALGRADNVFLFQPENIGWDVVD IVSQCVQPAVWNMNLDKLVEMIADEAKPTDHILVMSNGSFGGIHQKLLDKLALKTE
Specific function: Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N-acetylmuramic acid [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1790680, Length=452, Percent_Identity=66.3716814159292, Blast_Score=660, Evalue=0.0, Organism=Escherichia coli, GI1786279, Length=484, Percent_Identity=30.1652892561983, Blast_Score=137, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005757 - InterPro: IPR016040 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: 6.3.2.- [C]
Molecular weight: Translated: 50813; Mature: 50682
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKHIHILGICGTFMGGVAMIAKQLGYKVTGSDTHVYPPMSTFLMENGIEIIPHFDPTQ CCEEEEEEEEEHHHHHHHHHHHHHHHCCEECCCCCEECCCHHHHHHHCCCEEECCCCCCC LQPAPDMVIIGNAMKRGNPCVEYVLEHHLPYTSGPQWLHDHLLRDRWVLAVSGTHGKTTT CCCCCCEEEEECCHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHH TGMLSWILDKCGLKPGFLIGGISGNFGISARLGESDYFVIEADEYDTAFFDKRSKFVHYN HHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCEEEEECCCCCCHHHHCCCCEEEEC PKTLIINNIGFDHADIFDDLKAIQRQFHHMIRTMPASGRILSVANEPNVKATLDMGCWSQ CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCH QQFLGQDQDWYAERISHDCTQFGVFYQGEKMAEVYWNVVGQHNMHNALMAIAAAHHVGIS HHHCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH IAEACQALATFISPKRRLEVKGQVNGITVYDDFAHHPTEILATLTALRDKVGGGVRILAV HHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE LEPRSNTMKMGVHKDEIAPALGRADNVFLFQPENIGWDVVDIVSQCVQPAVWNMNLDKLV ECCCCCCEEECCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHH EMIADEAKPTDHILVMSNGSFGGIHQKLLDKLALKTE HHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TVKHIHILGICGTFMGGVAMIAKQLGYKVTGSDTHVYPPMSTFLMENGIEIIPHFDPTQ CEEEEEEEEEHHHHHHHHHHHHHHHCCEECCCCCEECCCHHHHHHHCCCEEECCCCCCC LQPAPDMVIIGNAMKRGNPCVEYVLEHHLPYTSGPQWLHDHLLRDRWVLAVSGTHGKTTT CCCCCCEEEEECCHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHH TGMLSWILDKCGLKPGFLIGGISGNFGISARLGESDYFVIEADEYDTAFFDKRSKFVHYN HHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCEEEEECCCCCCHHHHCCCCEEEEC PKTLIINNIGFDHADIFDDLKAIQRQFHHMIRTMPASGRILSVANEPNVKATLDMGCWSQ CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEECCCCCH QQFLGQDQDWYAERISHDCTQFGVFYQGEKMAEVYWNVVGQHNMHNALMAIAAAHHVGIS HHHCCCCHHHHHHHHHHHHHHHCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH IAEACQALATFISPKRRLEVKGQVNGITVYDDFAHHPTEILATLTALRDKVGGGVRILAV HHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEE LEPRSNTMKMGVHKDEIAPALGRADNVFLFQPENIGWDVVDIVSQCVQPAVWNMNLDKLV ECCCCCCEEECCCHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCHHHHH EMIADEAKPTDHILVMSNGSFGGIHQKLLDKLALKTE HHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]