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The map label for this gene is ygdL [C]

Identifier: 15602792

GI number: 15602792

Start: 1094200

End: 1094976

Strand: Reverse

Name: ygdL [C]

Synonym: PM0927

Alternate gene names: 15602792

Gene position: 1094976-1094200 (Counterclockwise)

Preceding gene: 15602793

Following gene: 15602791

Centisome position: 48.5

GC content: 40.67

Gene sequence:

>777_bases
GTGGGTATTACAATAATGGAGAGAGTGGATAATTATGAACAACGTTTTGGTGGGATCGCACGTTTATACAGTACTGAAGG
GCTTACTCGTTTAAAACAGTCTCATGTCTGCGTTATCGGTATTGGTGGCGTCGGTTCATGGTGTGTGGAGGCATTAGCGC
GCTCAGGTGTGGGCAAATTGACGTTAATTGATATGGATGATATTTGCGTGACCAACATTAACCGCCAAATCCATGCGCTT
TCTGGCAACATTGGGCAATTAAAGACAGAAGTGATGAAAGCGCGGGTTGCGTTAATTAATCCTGAATGTGAAGTAGCGAT
TATTGATGATTTTATTTCCAGCGAAAACTTAGCGGATTATTTATCGAAAGGCTATGATTATGTCATTGATGCGATCGATC
ATGTCAAAACGAAAGCCGCACTCATTGCTTATTGTAAACGTCATAAAATTAACATGATTACCGTTGGTGGAGCAGGAGGT
CAAACCGATCCGACTCAGATCCAAATTACCGATTTAAGTAGGACGATTCAAGATCCGCTCTTAGCAAAAGTACGTTCCTT
ATTACGTAAGGAATACCATTTTAGCCAAAATCCAAAACGAAAATTTGGTATTGATTGTGTGTTTTCCACACAACCCTTAA
TTTTTCCCAACGTGGATGGCAATTGTGAAGTATCAGCAAGTATGAACTGTGCCAATGGCTTTGGTGCTGCCACTATGGTG
ACTGCAACTTTTGGATTCTTTGCGGTTTCTCGTGTTATTAATAAACTGTTACGTTAA

Upstream 100 bases:

>100_bases
ATGTGGGTGGGGCAGTGAAAGGGCATCACTTTGATTTATATCGTGGGATTGGCGATGACGCGGGTCATATTGCAGGATTA
TCAAAACATTATGGACGTGT

Downstream 100 bases:

>100_bases
GCAGAAAAACCGAAATAGGTGAATGACGTTTCACCTTTTTTTATTTCAACTTATTTTTTAGTTAAAAAAAAGATGGCAAT
TATCATGAAAAAAGAGTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGITIMERVDNYEQRFGGIARLYSTEGLTRLKQSHVCVIGIGGVGSWCVEALARSGVGKLTLIDMDDICVTNINRQIHAL
SGNIGQLKTEVMKARVALINPECEVAIIDDFISSENLADYLSKGYDYVIDAIDHVKTKAALIAYCKRHKINMITVGGAGG
QTDPTQIQITDLSRTIQDPLLAKVRSLLRKEYHFSQNPKRKFGIDCVFSTQPLIFPNVDGNCEVSASMNCANGFGAATMV
TATFGFFAVSRVINKLLR

Sequences:

>Translated_258_residues
MGITIMERVDNYEQRFGGIARLYSTEGLTRLKQSHVCVIGIGGVGSWCVEALARSGVGKLTLIDMDDICVTNINRQIHAL
SGNIGQLKTEVMKARVALINPECEVAIIDDFISSENLADYLSKGYDYVIDAIDHVKTKAALIAYCKRHKINMITVGGAGG
QTDPTQIQITDLSRTIQDPLLAKVRSLLRKEYHFSQNPKRKFGIDCVFSTQPLIFPNVDGNCEVSASMNCANGFGAATMV
TATFGFFAVSRVINKLLR
>Mature_257_residues
GITIMERVDNYEQRFGGIARLYSTEGLTRLKQSHVCVIGIGGVGSWCVEALARSGVGKLTLIDMDDICVTNINRQIHALS
GNIGQLKTEVMKARVALINPECEVAIIDDFISSENLADYLSKGYDYVIDAIDHVKTKAALIAYCKRHKINMITVGGAGGQ
TDPTQIQITDLSRTIQDPLLAKVRSLLRKEYHFSQNPKRKFGIDCVFSTQPLIFPNVDGNCEVSASMNCANGFGAATMVT
ATFGFFAVSRVINKLLR

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=255, Percent_Identity=59.2156862745098, Blast_Score=332, Evalue=1e-92,
Organism=Escherichia coli, GI87082356, Length=138, Percent_Identity=32.6086956521739, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1787048, Length=136, Percent_Identity=30.8823529411765, Blast_Score=78, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6321790, Length=201, Percent_Identity=30.3482587064677, Blast_Score=102, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6322825, Length=164, Percent_Identity=31.7073170731707, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6321903, Length=145, Percent_Identity=29.6551724137931, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24582879, Length=125, Percent_Identity=35.2, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24660640, Length=129, Percent_Identity=27.906976744186, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28269; Mature: 28138

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITIMERVDNYEQRFGGIARLYSTEGLTRLKQSHVCVIGIGGVGSWCVEALARSGVGKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCEE
TLIDMDDICVTNINRQIHALSGNIGQLKTEVMKARVALINPECEVAIIDDFISSENLADY
EEEECCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEECHHHCCCHHHHH
LSKGYDYVIDAIDHVKTKAALIAYCKRHKINMITVGGAGGQTDPTQIQITDLSRTIQDPL
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHH
LAKVRSLLRKEYHFSQNPKRKFGIDCVFSTQPLIFPNVDGNCEVSASMNCANGFGAATMV
HHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCCCCHHHHH
TATFGFFAVSRVINKLLR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GITIMERVDNYEQRFGGIARLYSTEGLTRLKQSHVCVIGIGGVGSWCVEALARSGVGKL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCEE
TLIDMDDICVTNINRQIHALSGNIGQLKTEVMKARVALINPECEVAIIDDFISSENLADY
EEEECCCHHHHCCCCEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEECHHHCCCHHHHH
LSKGYDYVIDAIDHVKTKAALIAYCKRHKINMITVGGAGGQTDPTQIQITDLSRTIQDPL
HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHH
LAKVRSLLRKEYHFSQNPKRKFGIDCVFSTQPLIFPNVDGNCEVSASMNCANGFGAATMV
HHHHHHHHHHHHCCCCCCCHHHCCEEEECCCCEEECCCCCCEEEEECCCCCCCCCHHHHH
TATFGFFAVSRVINKLLR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]