| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is gmk
Identifier: 15602787
GI number: 15602787
Start: 1088137
End: 1088763
Strand: Reverse
Name: gmk
Synonym: PM0922
Alternate gene names: 15602787
Gene position: 1088763-1088137 (Counterclockwise)
Preceding gene: 15602788
Following gene: 15602786
Centisome position: 48.23
GC content: 37.96
Gene sequence:
>627_bases ATGGCACAAGGTAATTTATATATTCTTTCGGCACCCAGTGGCGCGGGGAAATCCTCATTAATTTCCGCATTATTAAATCA GCAACAAGACAATAAAATGATGGTTTCTGTTTCACATACAACAAGACAACCCCGTCCCGGTGAGCAAGAGGGAGTGCATT ATTATTTTGTATCAGTTGAAGCCTTTGAATCATTGATTGAGCAAGATTTATTTCTTGAGTATGCCAAGGTTTTTGGCGGA AATTATTACGGCACTTCATTACCTGCTATCGAAGAAAATTTAGCCAAAGGTATTGATGTTTTTTTAGATATTGATTGGCA GGGTGCGCAGCAAATTCGTCAAAAAGTGCCGAATGTCAAAAGTATTTTTATTTTACCCCCGTCTTTAGCTGAATTAGAAC GTCGTTTAATTGGACGTGGGCAAGATAGTACGGAAGTGATTGCCGCACGTATGTCGAAAGCAATCGATGAAATTTCTCAT TATAATGAATACGATTATGTGATTGTAAATGATGTCTTTGAACAAGCATTAGCTGATTTTCAAGCGATTCTACGTGCCGA ACGTTTAACGTTAACGCATCAGCAAAAACAAAATCAGGCGTTGATTGAACAATTGCTAGCAAAATAG
Upstream 100 bases:
>100_bases TAAATTTTTTTAAAATCTACCGCACTTTTTTATTTTTAGCTGATTTTCCGTGGATTTATCGGCATAATAGTCATTATCAT TCATTATAAAGGAAGACGTT
Downstream 100 bases:
>100_bases ACCTCACTTTAGTATCATATGACCCCTTTTTAACATTTTTTTGACTAATAAGAGATGGAGTAATATATGGCTCGTGTCAC AGTACAAGGTGCGGTAGAAA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAQGNLYILSAPSGAGKSSLISALLNQQQDNKMMVSVSHTTRQPRPGEQEGVHYYFVSVEAFESLIEQDLFLEYAKVFGG NYYGTSLPAIEENLAKGIDVFLDIDWQGAQQIRQKVPNVKSIFILPPSLAELERRLIGRGQDSTEVIAARMSKAIDEISH YNEYDYVIVNDVFEQALADFQAILRAERLTLTHQQKQNQALIEQLLAK
Sequences:
>Translated_208_residues MAQGNLYILSAPSGAGKSSLISALLNQQQDNKMMVSVSHTTRQPRPGEQEGVHYYFVSVEAFESLIEQDLFLEYAKVFGG NYYGTSLPAIEENLAKGIDVFLDIDWQGAQQIRQKVPNVKSIFILPPSLAELERRLIGRGQDSTEVIAARMSKAIDEISH YNEYDYVIVNDVFEQALADFQAILRAERLTLTHQQKQNQALIEQLLAK >Mature_207_residues AQGNLYILSAPSGAGKSSLISALLNQQQDNKMMVSVSHTTRQPRPGEQEGVHYYFVSVEAFESLIEQDLFLEYAKVFGGN YYGTSLPAIEENLAKGIDVFLDIDWQGAQQIRQKVPNVKSIFILPPSLAELERRLIGRGQDSTEVIAARMSKAIDEISHY NEYDYVIVNDVFEQALADFQAILRAERLTLTHQQKQNQALIEQLLAK
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=185, Percent_Identity=41.0810810810811, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI226874833, Length=185, Percent_Identity=41.0810810810811, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI4504221, Length=185, Percent_Identity=41.0810810810811, Blast_Score=122, Evalue=2e-28, Organism=Homo sapiens, GI38570142, Length=180, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI14780902, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI111154074, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI21361598, Length=197, Percent_Identity=27.4111675126904, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI21536464, Length=159, Percent_Identity=31.4465408805031, Blast_Score=67, Evalue=8e-12, Organism=Homo sapiens, GI52630447, Length=193, Percent_Identity=27.4611398963731, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1790080, Length=207, Percent_Identity=66.1835748792271, Blast_Score=281, Evalue=2e-77, Organism=Caenorhabditis elegans, GI193203132, Length=182, Percent_Identity=39.5604395604396, Blast_Score=131, Evalue=3e-31, Organism=Caenorhabditis elegans, GI17508835, Length=182, Percent_Identity=39.5604395604396, Blast_Score=130, Evalue=5e-31, Organism=Caenorhabditis elegans, GI71984092, Length=134, Percent_Identity=34.3283582089552, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=185, Percent_Identity=39.4594594594595, Blast_Score=134, Evalue=7e-33, Organism=Drosophila melanogaster, GI21356141, Length=193, Percent_Identity=39.8963730569948, Blast_Score=122, Evalue=1e-28, Organism=Drosophila melanogaster, GI85724806, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007136, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640542, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI45554489, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI45554481, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI161077626, Length=184, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_PASMU (P57888)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245859.1 - ProteinModelPortal: P57888 - SMR: P57888 - GeneID: 1244269 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0922 - NMPDR: fig|272843.1.peg.922 - HOGENOM: HBG671982 - OMA: DIDWQGT - ProtClustDB: PRK00300 - BioCyc: PMUL272843:PM0922-MONOMER - BRENDA: 2.7.4.8 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 23378; Mature: 23247
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGNLYILSAPSGAGKSSLISALLNQQQDNKMMVSVSHTTRQPRPGEQEGVHYYFVSVE CCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHH AFESLIEQDLFLEYAKVFGGNYYGTSLPAIEENLAKGIDVFLDIDWQGAQQIRQKVPNVK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCC SIFILPPSLAELERRLIGRGQDSTEVIAARMSKAIDEISHYNEYDYVIVNDVFEQALADF EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH QAILRAERLTLTHQQKQNQALIEQLLAK HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQGNLYILSAPSGAGKSSLISALLNQQQDNKMMVSVSHTTRQPRPGEQEGVHYYFVSVE CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHH AFESLIEQDLFLEYAKVFGGNYYGTSLPAIEENLAKGIDVFLDIDWQGAQQIRQKVPNVK HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCC SIFILPPSLAELERRLIGRGQDSTEVIAARMSKAIDEISHYNEYDYVIVNDVFEQALADF EEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH QAILRAERLTLTHQQKQNQALIEQLLAK HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100