BacMap

Definition	Pasteurella multocida subsp. multocida str. Pm70, complete genome.
Accession	NC_002663
Length	2,257,487

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The map label for this gene is yqjQ [H]

Identifier: 15602781

GI number: 15602781

Start: 1075600

End: 1076397

Strand: Reverse

Name: yqjQ [H]

Synonym: PM0916

Alternate gene names: 15602781

Gene position: 1076397-1075600 (Counterclockwise)

Preceding gene: 15602782

Following gene: 15602775

Centisome position: 47.68

GC content: 36.47

Gene sequence:

>798_bases
ATGTTGGAACATGAAATGAATAATGGCTATATTTTAATTACTGGTGCAAGCTCAGGAATTGGTTATCAGCTTGCTAAAAC
ATATGCACAGAAAGGTAATAAATTAATTTTGGTGGCAAGGACTTTAGCGCCTTTAGTGGCATTGCAGCAACAATATGTGG
GAAACATTGAGATTATCCAAGCAGATTTGTCTTGTTTAGAAGAGACGCGAAATGTATATACTTTTACACAACAACGAGGA
TGGTTTATTCATACATTAATTAATAATGCAGGAGTAGGATTATTAGGGGATTTTACTCAAACTACATTAGAAGATGAAAT
CGCGATGGTGAACTTGAATATTCAGTCTTTAATGATACTCAGCAAACTGTATTTACAAGAGATGATGAAAATGAATCAAG
GGCACATTCTTAATGTTTCTTCTGTTGCGGGTGAAATGCCGGGTGGTCCTCAAATGTCGGTATATTATGCAACTAAAGCT
TTTGTTACGTCATTTAGTCAAGGACTAAGTTATGAATTAAGACACACGGGGATAAAGGTGTCTATTTTAGCACCGGGTCC
TACATTGACCAATTTTGTTAAAACGGCGACACGCACAGAAAATGCGACGCTCTTTGATATGTTGAAGTTTCAGACCGCGG
AGACAGTTGCTCGATATACTGAAAAGCATTTAGCACATAAGAAATTGATTATTCCGGGTGTCTGGAATAAATTGATGGTT
TATAGTCACCGTTTTTTACCACGAACTTTTGTTATTGCACTTGTAAGTCGTATTCAGCATTTAAAGAAAGAGAAGTAG

Upstream 100 bases:

>100_bases
GACAAAATGTAAGTCACATTATTTCGCACAATAAAGAGTATGACATTACATTTCTTTTCGTTTTTTCAGTTAAAATAGAA
AAACTGTATTTGGCAGCGTT

Downstream 100 bases:

>100_bases
CGCTATTTTGTAGCCCAAGAACCTTCATCTAATAAGCGTCCAAAATGGCTTTCGACGAGACGTTTTGTGACTTCTGTTTT
TGGATGAGTAAAGAGTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLEHEMNNGYILITGASSGIGYQLAKTYAQKGNKLILVARTLAPLVALQQQYVGNIEIIQADLSCLEETRNVYTFTQQRG
WFIHTLINNAGVGLLGDFTQTTLEDEIAMVNLNIQSLMILSKLYLQEMMKMNQGHILNVSSVAGEMPGGPQMSVYYATKA
FVTSFSQGLSYELRHTGIKVSILAPGPTLTNFVKTATRTENATLFDMLKFQTAETVARYTEKHLAHKKLIIPGVWNKLMV
YSHRFLPRTFVIALVSRIQHLKKEK

Sequences:

>Translated_265_residues
MLEHEMNNGYILITGASSGIGYQLAKTYAQKGNKLILVARTLAPLVALQQQYVGNIEIIQADLSCLEETRNVYTFTQQRG
WFIHTLINNAGVGLLGDFTQTTLEDEIAMVNLNIQSLMILSKLYLQEMMKMNQGHILNVSSVAGEMPGGPQMSVYYATKA
FVTSFSQGLSYELRHTGIKVSILAPGPTLTNFVKTATRTENATLFDMLKFQTAETVARYTEKHLAHKKLIIPGVWNKLMV
YSHRFLPRTFVIALVSRIQHLKKEK
>Mature_265_residues
MLEHEMNNGYILITGASSGIGYQLAKTYAQKGNKLILVARTLAPLVALQQQYVGNIEIIQADLSCLEETRNVYTFTQQRG
WFIHTLINNAGVGLLGDFTQTTLEDEIAMVNLNIQSLMILSKLYLQEMMKMNQGHILNVSSVAGEMPGGPQMSVYYATKA
FVTSFSQGLSYELRHTGIKVSILAPGPTLTNFVKTATRTENATLFDMLKFQTAETVARYTEKHLAHKKLIIPGVWNKLMV
YSHRFLPRTFVIALVSRIQHLKKEK

Specific function: Unknown

COG id: COG0300

COG function: function code R; Short-chain dehydrogenases of various substrate specificities

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI20149619, Length=276, Percent_Identity=26.8115942028986, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI40254992, Length=182, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI109715829, Length=223, Percent_Identity=29.5964125560538, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI4557649, Length=209, Percent_Identity=31.1004784688995, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI210032110, Length=260, Percent_Identity=28.4615384615385, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7705855, Length=214, Percent_Identity=28.5046728971963, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI210032112, Length=257, Percent_Identity=27.6264591439689, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI40548397, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI214010158, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI214010156, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI22758144, Length=197, Percent_Identity=29.4416243654822, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI7706318, Length=206, Percent_Identity=30.0970873786408, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI150247226, Length=237, Percent_Identity=26.5822784810127, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI226371731, Length=184, Percent_Identity=28.804347826087, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI7657478, Length=189, Percent_Identity=30.1587301587302, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4504503, Length=229, Percent_Identity=27.5109170305677, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI22507405, Length=189, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI19743808, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI31542939, Length=223, Percent_Identity=28.6995515695067, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI142976729, Length=255, Percent_Identity=26.6666666666667, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI44680136, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI44680133, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI17738292, Length=194, Percent_Identity=27.319587628866, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI223718074, Length=240, Percent_Identity=27.5, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787820, Length=179, Percent_Identity=32.4022346368715, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI87082100, Length=225, Percent_Identity=28.4444444444444, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787335, Length=194, Percent_Identity=28.8659793814433, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786701, Length=192, Percent_Identity=27.6041666666667, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI2367175, Length=190, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787905, Length=192, Percent_Identity=29.1666666666667, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=195, Percent_Identity=31.2820512820513, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71994600, Length=196, Percent_Identity=30.1020408163265, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=191, Percent_Identity=26.7015706806283, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=193, Percent_Identity=29.0155440414508, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=209, Percent_Identity=24.4019138755981, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=191, Percent_Identity=27.7486910994764, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=212, Percent_Identity=28.7735849056604, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562910, Length=198, Percent_Identity=30.8080808080808, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=195, Percent_Identity=25.6410256410256, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=196, Percent_Identity=28.0612244897959, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=214, Percent_Identity=26.1682242990654, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17551412, Length=216, Percent_Identity=26.8518518518519, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17563726, Length=197, Percent_Identity=27.9187817258883, Blast_Score=64, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=196, Percent_Identity=25, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=191, Percent_Identity=34.0314136125654, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6320089, Length=201, Percent_Identity=29.8507462686567, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI23397609, Length=191, Percent_Identity=31.413612565445, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24640442, Length=196, Percent_Identity=32.6530612244898, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24580925, Length=202, Percent_Identity=31.1881188118812, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI21357041, Length=186, Percent_Identity=33.8709677419355, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI161076933, Length=216, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24584748, Length=216, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571526, Length=188, Percent_Identity=33.5106382978723, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24644339, Length=186, Percent_Identity=32.7956989247312, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24584744, Length=219, Percent_Identity=31.0502283105023, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574402, Length=219, Percent_Identity=31.0502283105023, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21358495, Length=197, Percent_Identity=29.4416243654822, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24648944, Length=195, Percent_Identity=29.7435897435897, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24643142, Length=189, Percent_Identity=31.2169312169312, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI116007236, Length=200, Percent_Identity=26, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24584752, Length=188, Percent_Identity=28.7234042553192, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007234, Length=198, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 29731; Mature: 29731

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHEMNNGYILITGASSGIGYQLAKTYAQKGNKLILVARTLAPLVALQQQYVGNIEIIQ
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCEEEEH
ADLSCLEETRNVYTFTQQRGWFIHTLINNAGVGLLGDFTQTTLEDEIAMVNLNIQSLMIL
HHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCEECCHHHHHHHCCEEEEECCHHHHHHH
SKLYLQEMMKMNQGHILNVSSVAGEMPGGPQMSVYYATKAFVTSFSQGLSYELRHTGIKV
HHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCEEE
SILAPGPTLTNFVKTATRTENATLFDMLKFQTAETVARYTEKHLAHKKLIIPGVWNKLMV
EEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHH
YSHRFLPRTFVIALVSRIQHLKKEK
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEHEMNNGYILITGASSGIGYQLAKTYAQKGNKLILVARTLAPLVALQQQYVGNIEIIQ
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCEEEEH
ADLSCLEETRNVYTFTQQRGWFIHTLINNAGVGLLGDFTQTTLEDEIAMVNLNIQSLMIL
HHHHHHHHHHHEEEEECCCCEEEEEECCCCCCCEECCHHHHHHHCCEEEEECCHHHHHHH
SKLYLQEMMKMNQGHILNVSSVAGEMPGGPQMSVYYATKAFVTSFSQGLSYELRHTGIKV
HHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCCEEE
SILAPGPTLTNFVKTATRTENATLFDMLKFQTAETVARYTEKHLAHKKLIIPGVWNKLMV
EEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHHHHH
YSHRFLPRTFVIALVSRIQHLKKEK
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]