| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is sapF [H]
Identifier: 15602780
GI number: 15602780
Start: 1074800
End: 1075597
Strand: Direct
Name: sapF [H]
Synonym: PM0915
Alternate gene names: 15602780
Gene position: 1074800-1075597 (Clockwise)
Preceding gene: 15602779
Following gene: 15602789
Centisome position: 47.61
GC content: 38.97
Gene sequence:
>798_bases ATGGCACTATTACAAGTTGAAGATCTGTCAAAATCTTTTACTGATACGATGAGCTTATTTGGCGCCAGCCAATTTAATGC TGTAGAAAGAATTAGTTTTCGTCTTGATAAAAAACAGACACTAGCCATTATTGGTAAAAATGGCTCTGGAAAATCAACGC TTGCCAAAATGATCGTGGGTATTATCCCTCCAACTTCAGGGCGTATTCTCTTTAATGGTCAACCTCTCCTCTTTGGTGAT TACCAATATCGGGCAAAACACATCCGCATGATCTTTCAAGATCCTAACACGGCCTTTAATCCACGCTTAAATGTGGGGCA AATTTTGGATGCACCTTTGCGTTTAGTGACACATCTCGATAACCAAGATCGTAACCAAAAAATCTTCAATACACTCAAAT TAGTAGGGCTGTATCCAGATCATGCGAATGTTAAAATCAACACGATGTCAGCCAGTCAGAAACAACGTGTTGCGTTAGCG AGGGCCTTAATTTTAGATCCACAAATCATTATCGCAGATGATGCACTAGGCTCACTAGATGCCACGGTAAAAACCCAACT CACTAACTTGATGTTACATTTACAAGATAAGTTGGGTATTTCCTATATTTATGTTGGTCAACATTTAGGTATCATCAAAC ATATGGCGGATAATGTCTTAGTAATGGACGAAGGCAAAATGATTGAATATGGACAGACCAAATCACTCTTTACTCATCCA AAAACAGAAGTCACAAAACGTCTCGTCGAAAGCCATTTTGGACGCTTATTAGATGAAGGTTCTTGGGCTACAAAATAG
Upstream 100 bases:
>100_bases TCACTACCCTTTAAATTTACGCGAAAAACAATTTAAAGAAAAACAGGTTAGCGCCCCTTTAATACTCCAAAATGCAAAAT CAGAATAGAAGGTAAAGAGA
Downstream 100 bases:
>100_bases CGCTACTTCTCTTTCTTTAAATGCTGAATACGACTTACAAGTGCAATAACAAAAGTTCGTGGTAAAAAACGGTGACTATA AACCATCAATTTATTCCAGA
Product: SapF
Products: ADP; phosphate; peptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MALLQVEDLSKSFTDTMSLFGASQFNAVERISFRLDKKQTLAIIGKNGSGKSTLAKMIVGIIPPTSGRILFNGQPLLFGD YQYRAKHIRMIFQDPNTAFNPRLNVGQILDAPLRLVTHLDNQDRNQKIFNTLKLVGLYPDHANVKINTMSASQKQRVALA RALILDPQIIIADDALGSLDATVKTQLTNLMLHLQDKLGISYIYVGQHLGIIKHMADNVLVMDEGKMIEYGQTKSLFTHP KTEVTKRLVESHFGRLLDEGSWATK
Sequences:
>Translated_265_residues MALLQVEDLSKSFTDTMSLFGASQFNAVERISFRLDKKQTLAIIGKNGSGKSTLAKMIVGIIPPTSGRILFNGQPLLFGD YQYRAKHIRMIFQDPNTAFNPRLNVGQILDAPLRLVTHLDNQDRNQKIFNTLKLVGLYPDHANVKINTMSASQKQRVALA RALILDPQIIIADDALGSLDATVKTQLTNLMLHLQDKLGISYIYVGQHLGIIKHMADNVLVMDEGKMIEYGQTKSLFTHP KTEVTKRLVESHFGRLLDEGSWATK >Mature_264_residues ALLQVEDLSKSFTDTMSLFGASQFNAVERISFRLDKKQTLAIIGKNGSGKSTLAKMIVGIIPPTSGRILFNGQPLLFGDY QYRAKHIRMIFQDPNTAFNPRLNVGQILDAPLRLVTHLDNQDRNQKIFNTLKLVGLYPDHANVKINTMSASQKQRVALAR ALILDPQIIIADDALGSLDATVKTQLTNLMLHLQDKLGISYIYVGQHLGIIKHMADNVLVMDEGKMIEYGQTKSLFTHPK TEVTKRLVESHFGRLLDEGSWATK
Specific function: Involved in a peptide intake transport system that plays a role in the resistance to antimicrobial peptides [H]
COG id: COG4167
COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9665248, Length=238, Percent_Identity=26.0504201680672, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI9955968, Length=217, Percent_Identity=27.6497695852535, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI9955966, Length=217, Percent_Identity=27.6497695852535, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI45243524, Length=217, Percent_Identity=27.6497695852535, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI171184400, Length=216, Percent_Identity=27.3148148148148, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI42741659, Length=234, Percent_Identity=26.9230769230769, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI42490749, Length=226, Percent_Identity=26.5486725663717, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI255708477, Length=210, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI148612844, Length=213, Percent_Identity=27.2300469483568, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI21536378, Length=213, Percent_Identity=24.8826291079812, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=24.8803827751196, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1787547, Length=260, Percent_Identity=53.0769230769231, Blast_Score=290, Evalue=1e-79, Organism=Escherichia coli, GI1789962, Length=253, Percent_Identity=37.5494071146245, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI145693107, Length=254, Percent_Identity=33.8582677165354, Blast_Score=167, Evalue=8e-43, Organism=Escherichia coli, GI1787500, Length=257, Percent_Identity=34.2412451361868, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1788506, Length=226, Percent_Identity=36.7256637168142, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1787758, Length=251, Percent_Identity=30.6772908366534, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1789891, Length=233, Percent_Identity=33.0472103004292, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1789963, Length=264, Percent_Identity=32.5757575757576, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI48994883, Length=249, Percent_Identity=32.1285140562249, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI1786398, Length=237, Percent_Identity=29.535864978903, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1787759, Length=240, Percent_Identity=28.75, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1789890, Length=237, Percent_Identity=29.957805907173, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI87081834, Length=233, Percent_Identity=31.3304721030043, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI87081791, Length=249, Percent_Identity=26.5060240963855, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI87081709, Length=223, Percent_Identity=26.9058295964126, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=26.3392857142857, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=241, Percent_Identity=29.4605809128631, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787712, Length=233, Percent_Identity=28.755364806867, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786872, Length=207, Percent_Identity=30.9178743961353, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=26.046511627907, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1790467, Length=243, Percent_Identity=27.9835390946502, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789672, Length=247, Percent_Identity=25.9109311740891, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787548, Length=267, Percent_Identity=26.2172284644195, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=28.9795918367347, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788450, Length=252, Percent_Identity=27.3809523809524, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1788225, Length=263, Percent_Identity=27.7566539923954, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI48994997, Length=225, Percent_Identity=27.1111111111111, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1787164, Length=200, Percent_Identity=31.5, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1786703, Length=233, Percent_Identity=28.3261802575107, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI87082267, Length=268, Percent_Identity=25.3731343283582, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=27.0042194092827, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=29.7169811320755, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI48995001, Length=261, Percent_Identity=27.2030651340996, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1790162, Length=246, Percent_Identity=25.2032520325203, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1786654, Length=219, Percent_Identity=26.4840182648402, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1789873, Length=228, Percent_Identity=25.4385964912281, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1786563, Length=199, Percent_Identity=28.1407035175879, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788644, Length=220, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI48994943, Length=219, Percent_Identity=26.4840182648402, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1789991, Length=246, Percent_Identity=26.0162601626016, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786319, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1787105, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1789586, Length=223, Percent_Identity=28.6995515695067, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1790525, Length=195, Percent_Identity=30.2564102564103, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787792, Length=219, Percent_Identity=27.8538812785388, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788472, Length=230, Percent_Identity=26.0869565217391, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1786803, Length=239, Percent_Identity=23.0125523012552, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790544, Length=249, Percent_Identity=23.6947791164659, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1789864, Length=245, Percent_Identity=21.6326530612245, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1788210, Length=208, Percent_Identity=27.8846153846154, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87081782, Length=236, Percent_Identity=26.271186440678, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1790190, Length=265, Percent_Identity=24.5283018867925, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786653, Length=207, Percent_Identity=28.5024154589372, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786981, Length=202, Percent_Identity=28.7128712871287, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1786698, Length=203, Percent_Identity=28.0788177339901, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193208177, Length=241, Percent_Identity=31.5352697095436, Blast_Score=100, Evalue=6e-22, Organism=Caenorhabditis elegans, GI17565938, Length=217, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI193209708, Length=208, Percent_Identity=29.8076923076923, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17558664, Length=215, Percent_Identity=26.046511627907, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI212646699, Length=220, Percent_Identity=26.8181818181818, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17511077, Length=214, Percent_Identity=27.1028037383178, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71992290, Length=211, Percent_Identity=27.9620853080569, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17543740, Length=239, Percent_Identity=26.3598326359833, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202349, Length=215, Percent_Identity=26.046511627907, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI115535101, Length=206, Percent_Identity=27.1844660194175, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17569143, Length=220, Percent_Identity=28.1818181818182, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17541710, Length=215, Percent_Identity=25.1162790697674, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17569145, Length=212, Percent_Identity=27.8301886792453, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17567265, Length=205, Percent_Identity=25.8536585365854, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193211015, Length=224, Percent_Identity=24.5535714285714, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193211017, Length=224, Percent_Identity=24.5535714285714, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI25146777, Length=221, Percent_Identity=25.7918552036199, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71996809, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI71992285, Length=228, Percent_Identity=26.7543859649123, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17533971, Length=209, Percent_Identity=22.488038277512, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=220, Percent_Identity=29.0909090909091, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324985, Length=228, Percent_Identity=25, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323959, Length=216, Percent_Identity=26.3888888888889, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322640, Length=227, Percent_Identity=28.1938325991189, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI85726357, Length=216, Percent_Identity=26.8518518518519, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641565, Length=211, Percent_Identity=28.436018957346, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI23397593, Length=217, Percent_Identity=28.110599078341, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28574744, Length=202, Percent_Identity=28.2178217821782, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24666092, Length=230, Percent_Identity=26.9565217391304, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI28573571, Length=211, Percent_Identity=24.1706161137441, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI28573573, Length=211, Percent_Identity=24.1706161137441, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 29601; Mature: 29470
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLQVEDLSKSFTDTMSLFGASQFNAVERISFRLDKKQTLAIIGKNGSGKSTLAKMIVG CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHH IIPPTSGRILFNGQPLLFGDYQYRAKHIRMIFQDPNTAFNPRLNVGQILDAPLRLVTHLD HCCCCCCEEEECCCEEEEECHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC NQDRNQKIFNTLKLVGLYPDHANVKINTMSASQKQRVALARALILDPQIIIADDALGSLD CCCCHHHHHHHEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC ATVKTQLTNLMLHLQDKLGISYIYVGQHLGIIKHMADNVLVMDEGKMIEYGQTKSLFTHP HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCEEEEECCCEEECCCCCCHHCCC KTEVTKRLVESHFGRLLDEGSWATK HHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ALLQVEDLSKSFTDTMSLFGASQFNAVERISFRLDKKQTLAIIGKNGSGKSTLAKMIVG CEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHH IIPPTSGRILFNGQPLLFGDYQYRAKHIRMIFQDPNTAFNPRLNVGQILDAPLRLVTHLD HCCCCCCEEEECCCEEEEECHHHHHEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC NQDRNQKIFNTLKLVGLYPDHANVKINTMSASQKQRVALARALILDPQIIIADDALGSLD CCCCHHHHHHHEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCC ATVKTQLTNLMLHLQDKLGISYIYVGQHLGIIKHMADNVLVMDEGKMIEYGQTKSLFTHP HHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCEEEEECCCEEECCCCCCHHCCC KTEVTKRLVESHFGRLLDEGSWATK HHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; peptides [Periplasm]; H2O [C]
Specific reaction: ATP + peptides [Periplasm] + H2O = ADP + phosphate + peptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]