| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is aceE [H]
Identifier: 15602760
GI number: 15602760
Start: 1051649
End: 1054312
Strand: Reverse
Name: aceE [H]
Synonym: PM0895
Alternate gene names: 15602760
Gene position: 1054312-1051649 (Counterclockwise)
Preceding gene: 15602761
Following gene: 15602759
Centisome position: 46.7
GC content: 41.89
Gene sequence:
>2664_bases ATGTCAGATATGTTAAAGAATGACGTAGATCCAGTCGAAACTAATGATTGGTTGTTAGCTATTGATGCGGTCATTCGCGA AGAAGGTGTTGAACGCGCACAATATATTATTGAGCAATTAATGCAACACGCTCGAGCCAACAATGTTTCTTTACCAACAG GTATCACCACTGACTACATCAATACCATTCCAGCTTCAGAAGAACCAAACTATCCAGGCAATTTAGACTTAGAAAGACGT ATCCGCGGTGCAATTCGTTGGAATGCGATTATGATGGTATTGCGTGCTTCGAAAAAAGATTTGGAATTAGGTGGACATAT GTCTTCTTTCCAATCTTCTGCAACTATTTATGAAGTCTGTTTTAACCACTTCTTTAAAGCGCGCTCCGCGAAAAATGGTG GTGACTTAGTTTTCTTCCAAGGTCATATCTCACCAGGCATTTATGCCCGTGCATTCTTAGAAGGTCGTTTAACTGAAGAA CAAATGGATAACTTCCGTCAAGAAGTTCACGGTAAAGGGCTTTCTTCCTATCCGCATCCGAAATTAATGCCTGAATTCTG GCAGTTCCCAACCGTGTCCATGGGTCTAGGACCATTGAATGCCATTTACCAAGCGCGTTTCTTAAAATATTTACACAACC GTGGCTTAAAAGATACTGCTGATCAAACTGTTTATGCCTTCTTAGGTGATGGTGAAATGGATGAAGTGGAATCGCGTGGT GCGATTTCTGTGGCAGCGCGTGAGAAGTTAGACAACCTTGTGTTTGTGATTAACTGTAACTTACAACGTTTAGACGGTCC AGTAACAGGTAACGGCAAAATCATCCAAGAATTAGAAGGTTTATTCAACGGCGCAGGCTGGGAAGTGATTAAAGTGATTT GGGGCCGTCGTTGGGATCGTTTATTACAACGTGATACCTCAGGTAAATTATTACAATTAATGATGGAAGTGGTTGATGGT GACTACCAAACCATGAAAGCAAAAGATGGTGCTTACGTTCGTAAACACTTCTTTGGTCGTTACCCAGAAACAGAAGCCTT AGTGGCTGAAATGACAGATGATGAAATCTGGGCATTAAATCGTGGTGGTCACGATCCATTAAAAATATTCGCTGCCTTCA ATAAAGCAAAACAAGTGAAAGGGAAACCTGTTGTTTTACTTGTGAAAACCATTAAAGGTTATGGTATGGGTGAAGCTGCT GAAGGGAAAAACATTGCTCACCAAGTGAAGAAAATGGATATGTCAGGCGTGAAACACGTTCGTGATCGCTTTAATATTGA TATTGCAGATGCTGACATTGAAAATTTACCATACATTAAATTTGCAGAAGGTTCTGAAGAGTACAAATACCTTCACGAAC GTCGTCAAGCGTTACAAGGTTATTTACCAACCCGTTTACCACGTTTCACGGAACAATTAGAGGTGCCGGAATTAGAGGAG TTTGCACAATTATTTGAAGCTCAAGCCCGTCCAATTTCAACAACGATGGCATTTGTACGTTCACTAAACGTATTATTGAA AAACAAATCTGTGGGTAAACGTATCGTGCCAATTCTGGCAGACGAAGCACGTACATTTGGTATGGAAGGCTTATTCCGTC AAATCGGTATTTACAACCCGTATGGTCAAAACTATACCCCGCAAGATCGCGAGCAAGTATCTTACTACCGTGAAGCCATT GATGGTCAAGTGTTACAAGAAGGGATCAATGAGCAAGGTGCAACCGCCTCTTGGTTAGCTGCGGCTACTTCTTACTCAAC AAATGATTTCCCAATGATTCCATTCTATGTGTACTACTCCATGTTTGGTTTCCAACGTATTGGCGACTTAATGTGGGCCG CGGGTGACCAACAAGCACGTGGTTTCATGATTGGTGGAACATCGGGTCGTACAACATTAAACGGCGAAGGTTTACAACAT GAAGATGGTCACAGCCATATTCAATCATTAACTATCCCTAACTGTATCTCTTATGACCCAGCATTTGCTTTTGAGGTTGC GGTTATCATGCAAGACGGCGTACGTCGTATGTATGGACCAGAACAAGAGAACATTTACTACTATATCACTACATTGAACG AAACTTATGACCAACCGGCTATGCCAAAAGGTGCGGAAGAAGGTATCCGTAAAGGTATCTATAAGTTTGAAACCGTAACC GGTCAAGGTAAAGGTAAAGTTCAGTTATTAGGTTCTGGTGCAATCTTACGTCATGTTCGCGAAGCAGCACAGTTGTTAGC CAATGACTTTGGTGTCACTTCAGATGTGTATAGTGTACCGTCATTCACAGAAGTAGCACGTGAAGGTGCTGATGCAGATC GTTGGAACTTATTACATCCAGAAGCCAAAGCACGTGTACCTTACATTGCACAAGTAATGAATGATGCGCCTGCTGTTGCT GCAACAGACTACATGAAATTATTTGCAGAACAAGTTCGTGCTTATGTGCCAGCAGCAAGCTATCGTGTATTAGGTACAGA TGGTTTTGGTCGTTCAGATAGCCGTGAAAACCTACGTGAGCACTTTGAAGTGGATGCTCGTTATGTGGCAATCGCAGCAT TATCTGAATTGGCGAAACAAGGTACTATCGATAAGAAAGTGGTTGCAGACGCTATTCAAAAATACGGTATTGATGCAGAT AAAGTGAACCCACTTTACGCCTAA
Upstream 100 bases:
>100_bases TGTAAATTATATTCAATTTTACATATTTCGTGATTAATTCATTGTTTAATCTTAACTTAAGATTAAGCTTACTTTTAACT TAACAAATAAGGAAAAGACT
Downstream 100 bases:
>100_bases GTAAATAGGATTAACATTCCAGCTCCCTGATATCAGGGAGCATGTTATGGAATGATTGGAGGATAAAAAAACATGTCAAA ACAAATTCAAGTACCAGATA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 887; Mature: 886
Protein sequence:
>887_residues MSDMLKNDVDPVETNDWLLAIDAVIREEGVERAQYIIEQLMQHARANNVSLPTGITTDYINTIPASEEPNYPGNLDLERR IRGAIRWNAIMMVLRASKKDLELGGHMSSFQSSATIYEVCFNHFFKARSAKNGGDLVFFQGHISPGIYARAFLEGRLTEE QMDNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPLNAIYQARFLKYLHNRGLKDTADQTVYAFLGDGEMDEVESRG AISVAAREKLDNLVFVINCNLQRLDGPVTGNGKIIQELEGLFNGAGWEVIKVIWGRRWDRLLQRDTSGKLLQLMMEVVDG DYQTMKAKDGAYVRKHFFGRYPETEALVAEMTDDEIWALNRGGHDPLKIFAAFNKAKQVKGKPVVLLVKTIKGYGMGEAA EGKNIAHQVKKMDMSGVKHVRDRFNIDIADADIENLPYIKFAEGSEEYKYLHERRQALQGYLPTRLPRFTEQLEVPELEE FAQLFEAQARPISTTMAFVRSLNVLLKNKSVGKRIVPILADEARTFGMEGLFRQIGIYNPYGQNYTPQDREQVSYYREAI DGQVLQEGINEQGATASWLAAATSYSTNDFPMIPFYVYYSMFGFQRIGDLMWAAGDQQARGFMIGGTSGRTTLNGEGLQH EDGHSHIQSLTIPNCISYDPAFAFEVAVIMQDGVRRMYGPEQENIYYYITTLNETYDQPAMPKGAEEGIRKGIYKFETVT GQGKGKVQLLGSGAILRHVREAAQLLANDFGVTSDVYSVPSFTEVAREGADADRWNLLHPEAKARVPYIAQVMNDAPAVA ATDYMKLFAEQVRAYVPAASYRVLGTDGFGRSDSRENLREHFEVDARYVAIAALSELAKQGTIDKKVVADAIQKYGIDAD KVNPLYA
Sequences:
>Translated_887_residues MSDMLKNDVDPVETNDWLLAIDAVIREEGVERAQYIIEQLMQHARANNVSLPTGITTDYINTIPASEEPNYPGNLDLERR IRGAIRWNAIMMVLRASKKDLELGGHMSSFQSSATIYEVCFNHFFKARSAKNGGDLVFFQGHISPGIYARAFLEGRLTEE QMDNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPLNAIYQARFLKYLHNRGLKDTADQTVYAFLGDGEMDEVESRG AISVAAREKLDNLVFVINCNLQRLDGPVTGNGKIIQELEGLFNGAGWEVIKVIWGRRWDRLLQRDTSGKLLQLMMEVVDG DYQTMKAKDGAYVRKHFFGRYPETEALVAEMTDDEIWALNRGGHDPLKIFAAFNKAKQVKGKPVVLLVKTIKGYGMGEAA EGKNIAHQVKKMDMSGVKHVRDRFNIDIADADIENLPYIKFAEGSEEYKYLHERRQALQGYLPTRLPRFTEQLEVPELEE FAQLFEAQARPISTTMAFVRSLNVLLKNKSVGKRIVPILADEARTFGMEGLFRQIGIYNPYGQNYTPQDREQVSYYREAI DGQVLQEGINEQGATASWLAAATSYSTNDFPMIPFYVYYSMFGFQRIGDLMWAAGDQQARGFMIGGTSGRTTLNGEGLQH EDGHSHIQSLTIPNCISYDPAFAFEVAVIMQDGVRRMYGPEQENIYYYITTLNETYDQPAMPKGAEEGIRKGIYKFETVT GQGKGKVQLLGSGAILRHVREAAQLLANDFGVTSDVYSVPSFTEVAREGADADRWNLLHPEAKARVPYIAQVMNDAPAVA ATDYMKLFAEQVRAYVPAASYRVLGTDGFGRSDSRENLREHFEVDARYVAIAALSELAKQGTIDKKVVADAIQKYGIDAD KVNPLYA >Mature_886_residues SDMLKNDVDPVETNDWLLAIDAVIREEGVERAQYIIEQLMQHARANNVSLPTGITTDYINTIPASEEPNYPGNLDLERRI RGAIRWNAIMMVLRASKKDLELGGHMSSFQSSATIYEVCFNHFFKARSAKNGGDLVFFQGHISPGIYARAFLEGRLTEEQ MDNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPLNAIYQARFLKYLHNRGLKDTADQTVYAFLGDGEMDEVESRGA ISVAAREKLDNLVFVINCNLQRLDGPVTGNGKIIQELEGLFNGAGWEVIKVIWGRRWDRLLQRDTSGKLLQLMMEVVDGD YQTMKAKDGAYVRKHFFGRYPETEALVAEMTDDEIWALNRGGHDPLKIFAAFNKAKQVKGKPVVLLVKTIKGYGMGEAAE GKNIAHQVKKMDMSGVKHVRDRFNIDIADADIENLPYIKFAEGSEEYKYLHERRQALQGYLPTRLPRFTEQLEVPELEEF AQLFEAQARPISTTMAFVRSLNVLLKNKSVGKRIVPILADEARTFGMEGLFRQIGIYNPYGQNYTPQDREQVSYYREAID GQVLQEGINEQGATASWLAAATSYSTNDFPMIPFYVYYSMFGFQRIGDLMWAAGDQQARGFMIGGTSGRTTLNGEGLQHE DGHSHIQSLTIPNCISYDPAFAFEVAVIMQDGVRRMYGPEQENIYYYITTLNETYDQPAMPKGAEEGIRKGIYKFETVTG QGKGKVQLLGSGAILRHVREAAQLLANDFGVTSDVYSVPSFTEVAREGADADRWNLLHPEAKARVPYIAQVMNDAPAVAA TDYMKLFAEQVRAYVPAASYRVLGTDGFGRSDSRENLREHFEVDARYVAIAALSELAKQGTIDKKVVADAIQKYGIDADK VNPLYA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=889, Percent_Identity=78.0652418447694, Blast_Score=1479, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 99611; Mature: 99480
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDMLKNDVDPVETNDWLLAIDAVIREEGVERAQYIIEQLMQHARANNVSLPTGITTDYI CCCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH NTIPASEEPNYPGNLDLERRIRGAIRWNAIMMVLRASKKDLELGGHMSSFQSSATIYEVC HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHCCHHHHHHH FNHFFKARSAKNGGDLVFFQGHISPGIYARAFLEGRLTEEQMDNFRQEVHGKGLSSYPHP HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC KLMPEFWQFPTVSMGLGPLNAIYQARFLKYLHNRGLKDTADQTVYAFLGDGEMDEVESRG CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHCCC AISVAAREKLDNLVFVINCNLQRLDGPVTGNGKIIQELEGLFNGAGWEVIKVIWGRRWDR CEEHHHHHHHCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLQRDTSGKLLQLMMEVVDGDYQTMKAKDGAYVRKHFFGRYPETEALVAEMTDDEIWALN HHHCCCCHHHHHHHHHHHCCCHHEEECCCCHHHHHHHCCCCCCHHHHHHHCCCCCEEEEC RGGHDPLKIFAAFNKAKQVKGKPVVLLVKTIKGYGMGEAAEGKNIAHQVKKMDMSGVKHV CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RDRFNIDIADADIENLPYIKFAEGSEEYKYLHERRQALQGYLPTRLPRFTEQLEVPELEE HHHCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHH FAQLFEAQARPISTTMAFVRSLNVLLKNKSVGKRIVPILADEARTFGMEGLFRQIGIYNP HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCC YGQNYTPQDREQVSYYREAIDGQVLQEGINEQGATASWLAAATSYSTNDFPMIPFYVYYS CCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH MFGFQRIGDLMWAAGDQQARGFMIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDP HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCC AFAFEVAVIMQDGVRRMYGPEQENIYYYITTLNETYDQPAMPKGAEEGIRKGIYKFETVT HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHEEEEC GQGKGKVQLLGSGAILRHVREAAQLLANDFGVTSDVYSVPSFTEVAREGADADRWNLLHP CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCC EAKARVPYIAQVMNDAPAVAATDYMKLFAEQVRAYVPAASYRVLGTDGFGRSDSRENLRE HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH HFEVDARYVAIAALSELAKQGTIDKKVVADAIQKYGIDADKVNPLYA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure SDMLKNDVDPVETNDWLLAIDAVIREEGVERAQYIIEQLMQHARANNVSLPTGITTDYI CCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH NTIPASEEPNYPGNLDLERRIRGAIRWNAIMMVLRASKKDLELGGHMSSFQSSATIYEVC HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHCCHHHHHHH FNHFFKARSAKNGGDLVFFQGHISPGIYARAFLEGRLTEEQMDNFRQEVHGKGLSSYPHP HHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC KLMPEFWQFPTVSMGLGPLNAIYQARFLKYLHNRGLKDTADQTVYAFLGDGEMDEVESRG CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHCCC AISVAAREKLDNLVFVINCNLQRLDGPVTGNGKIIQELEGLFNGAGWEVIKVIWGRRWDR CEEHHHHHHHCCEEEEEECCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLQRDTSGKLLQLMMEVVDGDYQTMKAKDGAYVRKHFFGRYPETEALVAEMTDDEIWALN HHHCCCCHHHHHHHHHHHCCCHHEEECCCCHHHHHHHCCCCCCHHHHHHHCCCCCEEEEC RGGHDPLKIFAAFNKAKQVKGKPVVLLVKTIKGYGMGEAAEGKNIAHQVKKMDMSGVKHV CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH RDRFNIDIADADIENLPYIKFAEGSEEYKYLHERRQALQGYLPTRLPRFTEQLEVPELEE HHHCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHH FAQLFEAQARPISTTMAFVRSLNVLLKNKSVGKRIVPILADEARTFGMEGLFRQIGIYNP HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCC YGQNYTPQDREQVSYYREAIDGQVLQEGINEQGATASWLAAATSYSTNDFPMIPFYVYYS CCCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH MFGFQRIGDLMWAAGDQQARGFMIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDP HHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEECCCCCCCCCCHHHHHHCCCCCCCCCCC AFAFEVAVIMQDGVRRMYGPEQENIYYYITTLNETYDQPAMPKGAEEGIRKGIYKFETVT HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHCCHHEEEEC GQGKGKVQLLGSGAILRHVREAAQLLANDFGVTSDVYSVPSFTEVAREGADADRWNLLHP CCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHCCCCCCCCCCCCC EAKARVPYIAQVMNDAPAVAATDYMKLFAEQVRAYVPAASYRVLGTDGFGRSDSRENLRE HHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHH HFEVDARYVAIAALSELAKQGTIDKKVVADAIQKYGIDADKVNPLYA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]