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The map label for this gene is ycaK [C]

Identifier: 15602752

GI number: 15602752

Start: 1042395

End: 1043009

Strand: Reverse

Name: ycaK [C]

Synonym: PM0887

Alternate gene names: 15602752

Gene position: 1043009-1042395 (Counterclockwise)

Preceding gene: 15602753

Following gene: 15602751

Centisome position: 46.2

GC content: 39.19

Gene sequence:

>615_bases
ATGCATCATCTGATTATTTTTGCCCATCCAAATAGCCAAACGAGTTTTAATCGGGCGATTTTGGAAGCTACTTTGCAGGC
TAGCCAACAGTTAGACGTGCACACCGTGGTACGAGATTTGTACACGCTCAATTTCAATCCCATTTTATCTTGGGAGGAAA
TGCAAGCGGTTTACCAAGAGATCATTCCTGCTGAAGTCAAGTTTGAGCATCAACTCATTGAACAAGCGAATTTAATCACC
TTAGTTTATCCATTATGGTGGATGGGCTTTCCTGCGATCCTGAAAGGGTATTTGGATCGTGTATTAAGCTATGGTTTTGC
TTATAAAACTGAAAATGAACAATCTGTAGGCTTATTAGGTGGTAAAAAAATGCAACACTTTATCACGATTGGCAATAACG
TAGAGATTTATCAAAATATGGGGTTTGCACAATCGCTGAAAGATTGTTTAGTGGACGGATTATTCAATTATTGTGGCATC
ACTGATATTCAGCATGAGCTGTTTGGTGATATTCATTTGATTGATGATCACGCGCGTCACGCTATGTTGCAAAGGGTCAG
TGAGAAAACGCAAGAAAATTTAACCGCACTTTTAGAGAGAAAGTATGACAACTGA

Upstream 100 bases:

>100_bases
CGTGGCGCATTCAAGGCACGGATTTACAGGTCGGTGATTTAGTTGAAGTGCACCAAGTGGATGGTATTACGTTAAAAGTG
AAAAAAGTGAATTAAAGATT

Downstream 100 bases:

>100_bases
AAACCAACTTAACGCTTTTTCTATGCTAAGTCGCTTGTTTGGCAATTTGTTTTATCGTGCACCAAATGATCCGATTTTAG
CTAATGTGTTTGCTTGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MHHLIIFAHPNSQTSFNRAILEATLQASQQLDVHTVVRDLYTLNFNPILSWEEMQAVYQEIIPAEVKFEHQLIEQANLIT
LVYPLWWMGFPAILKGYLDRVLSYGFAYKTENEQSVGLLGGKKMQHFITIGNNVEIYQNMGFAQSLKDCLVDGLFNYCGI
TDIQHELFGDIHLIDDHARHAMLQRVSEKTQENLTALLERKYDN

Sequences:

>Translated_204_residues
MHHLIIFAHPNSQTSFNRAILEATLQASQQLDVHTVVRDLYTLNFNPILSWEEMQAVYQEIIPAEVKFEHQLIEQANLIT
LVYPLWWMGFPAILKGYLDRVLSYGFAYKTENEQSVGLLGGKKMQHFITIGNNVEIYQNMGFAQSLKDCLVDGLFNYCGI
TDIQHELFGDIHLIDDHARHAMLQRVSEKTQENLTALLERKYDN
>Mature_204_residues
MHHLIIFAHPNSQTSFNRAILEATLQASQQLDVHTVVRDLYTLNFNPILSWEEMQAVYQEIIPAEVKFEHQLIEQANLIT
LVYPLWWMGFPAILKGYLDRVLSYGFAYKTENEQSVGLLGGKKMQHFITIGNNVEIYQNMGFAQSLKDCLVDGLFNYCGI
TDIQHELFGDIHLIDDHARHAMLQRVSEKTQENLTALLERKYDN

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family [H]

Homologues:

Organism=Homo sapiens, GI156564357, Length=208, Percent_Identity=26.4423076923077, Blast_Score=80, Evalue=8e-16,
Organism=Homo sapiens, GI4505415, Length=201, Percent_Identity=30.3482587064677, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI1787129, Length=183, Percent_Identity=29.5081967213115, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003680 [H]

Pfam domain/function: PF02525 Flavodoxin_2 [H]

EC number: 1.6.99.- [C]

Molecular weight: Translated: 23569; Mature: 23569

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHLIIFAHPNSQTSFNRAILEATLQASQQLDVHTVVRDLYTLNFNPILSWEEMQAVYQE
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
IIPAEVKFEHQLIEQANLITLVYPLWWMGFPAILKGYLDRVLSYGFAYKTENEQSVGLLG
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
GKKMQHFITIGNNVEIYQNMGFAQSLKDCLVDGLFNYCGITDIQHELFGDIHLIDDHARH
CHHHHHEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEHHHHHH
AMLQRVSEKTQENLTALLERKYDN
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHHLIIFAHPNSQTSFNRAILEATLQASQQLDVHTVVRDLYTLNFNPILSWEEMQAVYQE
CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
IIPAEVKFEHQLIEQANLITLVYPLWWMGFPAILKGYLDRVLSYGFAYKTENEQSVGLLG
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
GKKMQHFITIGNNVEIYQNMGFAQSLKDCLVDGLFNYCGITDIQHELFGDIHLIDDHARH
CHHHHHEEEECCCEEEHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEHHHHHH
AMLQRVSEKTQENLTALLERKYDN
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]