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The map label for this gene is ycdY [C]

Identifier: 15602751

GI number: 15602751

Start: 1041830

End: 1042405

Strand: Reverse

Name: ycdY [C]

Synonym: PM0886

Alternate gene names: 15602751

Gene position: 1042405-1041830 (Counterclockwise)

Preceding gene: 15602752

Following gene: 15602749

Centisome position: 46.18

GC content: 40.8

Gene sequence:

>576_bases
ATGACAACTGAAAACCAACTTAACGCTTTTTCTATGCTAAGTCGCTTGTTTGGCAATTTGTTTTATCGTGCACCAAATGA
TCCGATTTTAGCTAATGTGTTTGCTTGGTTACAGCAGCAAGGACTTAGCGAAATCTGGGCACTTGAACTGGACAATCAAA
GCCAACAAGCGATTAATAGTGTGCAAATGCCGTTAGATTTAAACGCATTAAGTAAAGAATATGACAAGTTATTTATGGGA
GACACGCCACAAGTTAGCACTAAAATCAGTGATTATGCGGTTTCCGTTGAAGAATTTGTAAACTTTAGACAACAACGTGG
TATGCCAGCGCTAGAAAGTGCGGATCATTTTGCATTACTTTTGCTAACTGCCTCGTGGATTGAAGATAACCTTGATTCTG
TGGCGGCACAACATCAGTTGTTTGAACAATTCTTATTGCCTTGTGCCAGCCAATTTCTTACTCAAGTGGAAAGTAAGGCA
AGCTTGCCTTTTTATCGTGCCTTAGCACTTCTGTCGAAAGATATGTTGGCAGCGATGGCGGACGAATTAGAAGAAGCAAG
CGAGCAAGCCGTATAA

Upstream 100 bases:

>100_bases
GGTGATATTCATTTGATTGATGATCACGCGCGTCACGCTATGTTGCAAAGGGTCAGTGAGAAAACGCAAGAAAATTTAAC
CGCACTTTTAGAGAGAAAGT

Downstream 100 bases:

>100_bases
GCATTTTCTTGTCATGCTAAAAAAGCAGCGTTACGACGCTGCTTTTAATTTTTGTCCAAAACTCACCGCACTTTTTGTCG
CATAAGAACGATGGGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTTENQLNAFSMLSRLFGNLFYRAPNDPILANVFAWLQQQGLSEIWALELDNQSQQAINSVQMPLDLNALSKEYDKLFMG
DTPQVSTKISDYAVSVEEFVNFRQQRGMPALESADHFALLLLTASWIEDNLDSVAAQHQLFEQFLLPCASQFLTQVESKA
SLPFYRALALLSKDMLAAMADELEEASEQAV

Sequences:

>Translated_191_residues
MTTENQLNAFSMLSRLFGNLFYRAPNDPILANVFAWLQQQGLSEIWALELDNQSQQAINSVQMPLDLNALSKEYDKLFMG
DTPQVSTKISDYAVSVEEFVNFRQQRGMPALESADHFALLLLTASWIEDNLDSVAAQHQLFEQFLLPCASQFLTQVESKA
SLPFYRALALLSKDMLAAMADELEEASEQAV
>Mature_190_residues
TTENQLNAFSMLSRLFGNLFYRAPNDPILANVFAWLQQQGLSEIWALELDNQSQQAINSVQMPLDLNALSKEYDKLFMGD
TPQVSTKISDYAVSVEEFVNFRQQRGMPALESADHFALLLLTASWIEDNLDSVAAQHQLFEQFLLPCASQFLTQVESKAS
LPFYRALALLSKDMLAAMADELEEASEQAV

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family [H]

Homologues:

Organism=Escherichia coli, GI1787272, Length=188, Percent_Identity=38.8297872340425, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009073 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21476; Mature: 21344

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENQLNAFSMLSRLFGNLFYRAPNDPILANVFAWLQQQGLSEIWALELDNQSQQAINS
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHH
VQMPLDLNALSKEYDKLFMGDTPQVSTKISDYAVSVEEFVNFRQQRGMPALESADHFALL
HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHH
LLTASWIEDNLDSVAAQHQLFEQFLLPCASQFLTQVESKASLPFYRALALLSKDMLAAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DELEEASEQAV
HHHHHHHHCCC
>Mature Secondary Structure 
TTENQLNAFSMLSRLFGNLFYRAPNDPILANVFAWLQQQGLSEIWALELDNQSQQAINS
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHH
VQMPLDLNALSKEYDKLFMGDTPQVSTKISDYAVSVEEFVNFRQQRGMPALESADHFALL
HCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHH
LLTASWIEDNLDSVAAQHQLFEQFLLPCASQFLTQVESKASLPFYRALALLSKDMLAAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DELEEASEQAV
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]