| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is htrB [H]
Identifier: 15602750
GI number: 15602750
Start: 1040790
End: 1041731
Strand: Direct
Name: htrB [H]
Synonym: PM0885
Alternate gene names: 15602750
Gene position: 1040790-1041731 (Clockwise)
Preceding gene: 15602748
Following gene: 15602757
Centisome position: 46.1
GC content: 42.68
Gene sequence:
>942_bases ATGGCGAACGATAAACTCCCAACATTTCAAAAAAGATTTCTAAAACCAAAACACTGGGGATTTTGGTTAGGCGTTGCCTT ATGGCGTCTGATCGTATGTTTACCCTACCCGATTTTACACAAACTCGGGAACGGACTAGGCTGGTTACTCGCAAAATCAA CAGTAGGTCAACGTCGCGCCAACATTGCACGTCGCAATTTACAGCTCTGTTTTCCCCACTATTCTGCGGATCAAATTGAA ACCTTATTACATGCGAATTTAAAAGCCACCGGCATGGCGATTATTGAAACGGGTATGGCTTGGTTTTGGTCTGATGCAAG AATAAAAAAATGGTCAAAAATCGAAGGTCTTGAATACTTAAAAGAATATAAACAAGATGGTGTGATTCTTGTTGGGGTAC ATTTCCTAACCTTAGAATTGGGCGCCCGTATTGTTGGCTTGCATCAACCGGGCATAGGGGTTTACCGCCCGAATGACAAT CCTTTAATGGACTGGTTACAAGTGCAAGGTCGCTTACGTTCTAATAAAGATCTGCTCGATCGTAAAGATTTACGTGGCAT GATTCGTGCGTTACGCCAAGGTGAAATTATTTGGTATGCGCCTGATCATGATTATGGACGTAAAAATGCGGTCTTTGTGC CCTTTTTTGCTGTCCCTGATGCAGCGACTACAACGGGGAGCTATTATTTATTAAAATCCTCACCAACAAGTAAGGTGATC CCTTTTGCCCCATTACGCAATAGCGATGGGTCGGGTTATACCGTCAAAATCTCCCCCCCAGTGGATTTTTCCGATATTAC AGATGAAACTCGTATTGCCACACGCATGAACCAAGTCGTAGAAACGGAAATTATGAAAGGAGTGGAACAATATATGTGGC TACACCGCCGTTTTAAAACACGACCTGATGAAAATCAGCCAAGTTTATATGATGAGGAATAA
Upstream 100 bases:
>100_bases AATATTCACGCCCTATTTATGCGATAATTCGTAATATGATTACAAGTTGAGTTATGTTTTCTCATTCTCAATTTATTACT GAAGATACTCAAGCAATTTT
Downstream 100 bases:
>100_bases GACCCCATCGTTCTTATGCGACAAAAAGTGCGGTGAGTTTTGGACAAAAATTAAAAGCAGCGTCGTAACGCTGCTTTTTT AGCATGACAAGAAAATGCTT
Product: lipid A biosynthesis lauroyl acyltransferase
Products: NA
Alternate protein names: Heat shock protein B [H]
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MANDKLPTFQKRFLKPKHWGFWLGVALWRLIVCLPYPILHKLGNGLGWLLAKSTVGQRRANIARRNLQLCFPHYSADQIE TLLHANLKATGMAIIETGMAWFWSDARIKKWSKIEGLEYLKEYKQDGVILVGVHFLTLELGARIVGLHQPGIGVYRPNDN PLMDWLQVQGRLRSNKDLLDRKDLRGMIRALRQGEIIWYAPDHDYGRKNAVFVPFFAVPDAATTTGSYYLLKSSPTSKVI PFAPLRNSDGSGYTVKISPPVDFSDITDETRIATRMNQVVETEIMKGVEQYMWLHRRFKTRPDENQPSLYDEE
Sequences:
>Translated_313_residues MANDKLPTFQKRFLKPKHWGFWLGVALWRLIVCLPYPILHKLGNGLGWLLAKSTVGQRRANIARRNLQLCFPHYSADQIE TLLHANLKATGMAIIETGMAWFWSDARIKKWSKIEGLEYLKEYKQDGVILVGVHFLTLELGARIVGLHQPGIGVYRPNDN PLMDWLQVQGRLRSNKDLLDRKDLRGMIRALRQGEIIWYAPDHDYGRKNAVFVPFFAVPDAATTTGSYYLLKSSPTSKVI PFAPLRNSDGSGYTVKISPPVDFSDITDETRIATRMNQVVETEIMKGVEQYMWLHRRFKTRPDENQPSLYDEE >Mature_312_residues ANDKLPTFQKRFLKPKHWGFWLGVALWRLIVCLPYPILHKLGNGLGWLLAKSTVGQRRANIARRNLQLCFPHYSADQIET LLHANLKATGMAIIETGMAWFWSDARIKKWSKIEGLEYLKEYKQDGVILVGVHFLTLELGARIVGLHQPGIGVYRPNDNP LMDWLQVQGRLRSNKDLLDRKDLRGMIRALRQGEIIWYAPDHDYGRKNAVFVPFFAVPDAATTTGSYYLLKSSPTSKVIP FAPLRNSDGSGYTVKISPPVDFSDITDETRIATRMNQVVETEIMKGVEQYMWLHRRFKTRPDENQPSLYDEE
Specific function: Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA [H]
COG id: COG1560
COG function: function code M; Lauroyl/myristoyl acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the htrB/msbB family [H]
Homologues:
Organism=Escherichia coli, GI1787292, Length=307, Percent_Identity=53.0944625407166, Blast_Score=339, Evalue=1e-94, Organism=Escherichia coli, GI87082094, Length=304, Percent_Identity=47.6973684210526, Blast_Score=304, Evalue=6e-84, Organism=Escherichia coli, GI1788161, Length=314, Percent_Identity=31.2101910828025, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004960 - InterPro: IPR011920 [H]
Pfam domain/function: PF03279 Lip_A_acyltrans [H]
EC number: 2.3.1.-
Molecular weight: Translated: 35957; Mature: 35826
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDKLPTFQKRFLKPKHWGFWLGVALWRLIVCLPYPILHKLGNGLGWLLAKSTVGQRRA CCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHH NIARRNLQLCFPHYSADQIETLLHANLKATGMAIIETGMAWFWSDARIKKWSKIEGLEYL HHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHCHHHEECCHHHHHHHHHHHHHHH KEYKQDGVILVGVHFLTLELGARIVGLHQPGIGVYRPNDNPLMDWLQVQGRLRSNKDLLD HHHHHCCEEEEEHHHHHHHHCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCHHHH RKDLRGMIRALRQGEIIWYAPDHDYGRKNAVFVPFFAVPDAATTTGSYYLLKSSPTSKVI HHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCC PFAPLRNSDGSGYTVKISPPVDFSDITDETRIATRMNQVVETEIMKGVEQYMWLHRRFKT CCCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPDENQPSLYDEE CCCCCCCCCCCCC >Mature Secondary Structure ANDKLPTFQKRFLKPKHWGFWLGVALWRLIVCLPYPILHKLGNGLGWLLAKSTVGQRRA CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHH NIARRNLQLCFPHYSADQIETLLHANLKATGMAIIETGMAWFWSDARIKKWSKIEGLEYL HHHHCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHCHHHEECCHHHHHHHHHHHHHHH KEYKQDGVILVGVHFLTLELGARIVGLHQPGIGVYRPNDNPLMDWLQVQGRLRSNKDLLD HHHHHCCEEEEEHHHHHHHHCCEEEEEECCCCEEECCCCCHHHHHHHHHHHHCCCCHHHH RKDLRGMIRALRQGEIIWYAPDHDYGRKNAVFVPFFAVPDAATTTGSYYLLKSSPTSKVI HHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCC PFAPLRNSDGSGYTVKISPPVDFSDITDETRIATRMNQVVETEIMKGVEQYMWLHRRFKT CCCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPDENQPSLYDEE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Acyltransferases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 7592970 [H]