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The map label for this gene is yohJ [C]

Identifier: 15602745

GI number: 15602745

Start: 1036117

End: 1036653

Strand: Reverse

Name: yohJ [C]

Synonym: PM0880

Alternate gene names: 15602745

Gene position: 1036653-1036117 (Counterclockwise)

Preceding gene: 15602749

Following gene: 15602744

Centisome position: 45.92

GC content: 32.96

Gene sequence:

>537_bases
ATGAAAAATCCTTATAAAACGCACATATTCTACCTAAAAACTAACAAAAGAAACAAAATGGGAGTAAAATATTCCCTCAT
TTTTATTAAGACAATGTGTTTTATTGTCAACAACGATGGAGTAAAAATGACTCGGAAAATAGTTGATTTAGCTCGTTCAT
GCGGGATTTTGTATTTGATGTTATTCATCGGTGAGTGGATTGCACATCATCTTAATATTGGCATTCCTGCCAGTATTTGG
GGATTGTTACTGTTATTTTTGGGGTTAACGTTTAGGATAATTAAATTAGATTGGGTGTTATGTTCAGCCAGTTTATTAAT
TCGTTATATGGCACTATTATTCGTGCCAGTGAGTGTTGGGGTGATAAAATATGCGGATGTGTTATTTAGCCAAATGAACG
TCTTGTTATTACCTAATATTGTAAGCACTTTCTTAACATTGATTGTTGTCGGTTTACTTTCAGATTATTTATTTTCCTTA
AGCTCTTTTTCTCATTTACGTAAAAAAGTCGCCAGAAAACAAGCGGAGAAAGCATGA

Upstream 100 bases:

>100_bases
TAATACCAATCACCTGACAAGGTATCGAACGACTGGCTTGACTGCAGTGTGTAAAACATAGACAACACAGGGTGATAAGC
GCTAATTTTTTATACATATT

Downstream 100 bases:

>100_bases
TGAATTGGAGTCTGTATGGTTATTCTTTTTTAACGTTGCTTGCCTTCGCAGTGGCGGTGAAAATCAGCCGACATTGGAAA
TCGATTTTATTCAATTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKNPYKTHIFYLKTNKRNKMGVKYSLIFIKTMCFIVNNDGVKMTRKIVDLARSCGILYLMLFIGEWIAHHLNIGIPASIW
GLLLLFLGLTFRIIKLDWVLCSASLLIRYMALLFVPVSVGVIKYADVLFSQMNVLLLPNIVSTFLTLIVVGLLSDYLFSL
SSFSHLRKKVARKQAEKA

Sequences:

>Translated_178_residues
MKNPYKTHIFYLKTNKRNKMGVKYSLIFIKTMCFIVNNDGVKMTRKIVDLARSCGILYLMLFIGEWIAHHLNIGIPASIW
GLLLLFLGLTFRIIKLDWVLCSASLLIRYMALLFVPVSVGVIKYADVLFSQMNVLLLPNIVSTFLTLIVVGLLSDYLFSL
SSFSHLRKKVARKQAEKA
>Mature_178_residues
MKNPYKTHIFYLKTNKRNKMGVKYSLIFIKTMCFIVNNDGVKMTRKIVDLARSCGILYLMLFIGEWIAHHLNIGIPASIW
GLLLLFLGLTFRIIKLDWVLCSASLLIRYMALLFVPVSVGVIKYADVLFSQMNVLLLPNIVSTFLTLIVVGLLSDYLFSL
SSFSHLRKKVARKQAEKA

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=126, Percent_Identity=38.0952380952381, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 20320; Mature: 20320

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPYKTHIFYLKTNKRNKMGVKYSLIFIKTMCFIVNNDGVKMTRKIVDLARSCGILYLM
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LFIGEWIAHHLNIGIPASIWGLLLLFLGLTFRIIKLDWVLCSASLLIRYMALLFVPVSVG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIKYADVLFSQMNVLLLPNIVSTFLTLIVVGLLSDYLFSLSSFSHLRKKVARKQAEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNPYKTHIFYLKTNKRNKMGVKYSLIFIKTMCFIVNNDGVKMTRKIVDLARSCGILYLM
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LFIGEWIAHHLNIGIPASIWGLLLLFLGLTFRIIKLDWVLCSASLLIRYMALLFVPVSVG
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIKYADVLFSQMNVLLLPNIVSTFLTLIVVGLLSDYLFSLSSFSHLRKKVARKQAEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]