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The map label for this gene is yohK [C]

Identifier: 15602744

GI number: 15602744

Start: 1035422

End: 1036120

Strand: Reverse

Name: yohK [C]

Synonym: PM0879

Alternate gene names: 15602744

Gene position: 1036120-1035422 (Counterclockwise)

Preceding gene: 15602745

Following gene: 15602743

Centisome position: 45.9

GC content: 41.49

Gene sequence:

>699_bases
ATGATGAATTGGAGTCTGTATGGTTATTCTTTTTTAACGTTGCTTGCCTTCGCAGTGGCGGTGAAAATCAGCCGACATTG
GAAATCGATTTTATTCAATTCCTTTGTTTTAACTGTGACCTTGCTCGTGGTCATCTTGTTAACCATTGACATTTCTTATG
ATGATTATTTACAAGGCAATGCGCCCTTAAATAATTTATTAGGTATCAGTATTGTCGCGCTTGCAGTACCATTGTATGAA
CAGTTGCATCAAATTAGTCGTTATTGGAAAAATATTTTATTGATAACATGCTTGGCTTCATTGCTTTCTATGCTTTCAGG
CGCTGGTTTAGCCTTATACTTAGGCGCCACACCAGAAATGGTTGCCACAGTATTGCCGAAATCGGTCACGACGCCTATTG
CGATGGCGGTGTCTCAAGGATTGGGTGGTATACCCTCGATTGCTGCAGTGGGGGTTGTGATAGCGGGATTACAAGGGTCT
GTACTAGGTTTGCTTACGTTAAAAAAATTAAAAGTCAAACATGCGGAGGCGCGAGGATTAGCCATTGGTGCCATTTCCCA
TGCCTTAGGTACAGTCACTTGCATGGAAAGCGATCAAAAAGCTGGCAGTTATAGTTCCATTGCCCTCGTATTATGTGGCA
TTATGACGTCTATTCTTGCACCGATCACCTTTAAAATCCTTTATTTCTTTATGGCATAG

Upstream 100 bases:

>100_bases
TAACATTGATTGTTGTCGGTTTACTTTCAGATTATTTATTTTCCTTAAGCTCTTTTTCTCATTTACGTAAAAAAGTCGCC
AGAAAACAAGCGGAGAAAGC

Downstream 100 bases:

>100_bases
TATGAATAATCAAGTTGATCCAATTTGGCAATCACGCTTTATTGCTGATAAACCGCGTGAAAAAGATCATCGCCCGCCTT
TCCGTCGAGATCGAGGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MMNWSLYGYSFLTLLAFAVAVKISRHWKSILFNSFVLTVTLLVVILLTIDISYDDYLQGNAPLNNLLGISIVALAVPLYE
QLHQISRYWKNILLITCLASLLSMLSGAGLALYLGATPEMVATVLPKSVTTPIAMAVSQGLGGIPSIAAVGVVIAGLQGS
VLGLLTLKKLKVKHAEARGLAIGAISHALGTVTCMESDQKAGSYSSIALVLCGIMTSILAPITFKILYFFMA

Sequences:

>Translated_232_residues
MMNWSLYGYSFLTLLAFAVAVKISRHWKSILFNSFVLTVTLLVVILLTIDISYDDYLQGNAPLNNLLGISIVALAVPLYE
QLHQISRYWKNILLITCLASLLSMLSGAGLALYLGATPEMVATVLPKSVTTPIAMAVSQGLGGIPSIAAVGVVIAGLQGS
VLGLLTLKKLKVKHAEARGLAIGAISHALGTVTCMESDQKAGSYSSIALVLCGIMTSILAPITFKILYFFMA
>Mature_232_residues
MMNWSLYGYSFLTLLAFAVAVKISRHWKSILFNSFVLTVTLLVVILLTIDISYDDYLQGNAPLNNLLGISIVALAVPLYE
QLHQISRYWKNILLITCLASLLSMLSGAGLALYLGATPEMVATVLPKSVTTPIAMAVSQGLGGIPSIAAVGVVIAGLQGS
VLGLLTLKKLKVKHAEARGLAIGAISHALGTVTCMESDQKAGSYSSIALVLCGIMTSILAPITFKILYFFMA

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=224, Percent_Identity=47.7678571428571, Blast_Score=210, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24678; Mature: 24678

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNWSLYGYSFLTLLAFAVAVKISRHWKSILFNSFVLTVTLLVVILLTIDISYDDYLQGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
APLNNLLGISIVALAVPLYEQLHQISRYWKNILLITCLASLLSMLSGAGLALYLGATPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
VATVLPKSVTTPIAMAVSQGLGGIPSIAAVGVVIAGLQGSVLGLLTLKKLKVKHAEARGL
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCH
AIGAISHALGTVTCMESDQKAGSYSSIALVLCGIMTSILAPITFKILYFFMA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MMNWSLYGYSFLTLLAFAVAVKISRHWKSILFNSFVLTVTLLVVILLTIDISYDDYLQGN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCC
APLNNLLGISIVALAVPLYEQLHQISRYWKNILLITCLASLLSMLSGAGLALYLGATPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH
VATVLPKSVTTPIAMAVSQGLGGIPSIAAVGVVIAGLQGSVLGLLTLKKLKVKHAEARGL
HHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCH
AIGAISHALGTVTCMESDQKAGSYSSIALVLCGIMTSILAPITFKILYFFMA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]