| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is rec2 [H]
Identifier: 15602727
GI number: 15602727
Start: 1013843
End: 1016236
Strand: Reverse
Name: rec2 [H]
Synonym: PM0862
Alternate gene names: 15602727
Gene position: 1016236-1013843 (Counterclockwise)
Preceding gene: 15602731
Following gene: 15602726
Centisome position: 45.02
GC content: 40.06
Gene sequence:
>2394_bases ATGAAAAACACTCTTTTGTCAATATCTGTTGTGACTGTATTCAGTGCCTGTTCGTTACTTTGGCTACCTGAACATGTCTT GCTCCATTGGCATATGACATTGTTAGTCTTCGTATTATTGCTTGTTAGCATAATCATTTGTGTTCTTTGTGGCAAAAATC ACTGGATTTCGCCTTTGATCTTTGTACTGAGTTCAGTAGGCATTTTAGGCTATATCCACGATCAAGCTCGTCAGACATTA TTGCAAGCTGACTTGATTGCTCAACTGCCTCGAAAGATAGAGACTGAATTTAAAATCATTGAAGTATTACAACAAAAAAA CTATCAAACTTTTGTAGTTTCGGCACAATTGATACCGCAACAGGCAAAACAAAAAATGTTTCTTCAATGGCACGCGCAAG AAAAAGCACAGATTGGCGAAGTTTGGAAAGGAGAGCTGCGGCTCAGACCGATTTCATCAAGGCTCAATATGGGCGGTTTT GATAAACAGCAATGGTATTTCGCCAAAGGCATTACCGCTTATGCGACGGTAAAAAGTGCGGTCAAAATAAGTGAACAGTT ATCTTGGCGAGAAAAATGGTTACAAGAAACGATAAAACAGACCTCAACATTAGACTATCAAGGACTGTTAATCGCGTTGG CTTTTGGTGAACGGGCATGGTTACCCACAGATATTTGGCAAACTTATCAAAAAACTAGCACAGCACATGTGATTGCCATA TCGGGTTTACATATTGGACTTGCGATGGGAATAGGTTATTTTTTTATCCGTTTCATTCAGTTTGTGTTGCCATTAAAGTG GGTGACACCAACCTTACCAATATTCGTAGGGCTTCTTTTTGCCTGGTTTTATGCGGAGCTAGCGGGTTTTACTATACCGA CGACAAGAGCATTTTTCGCTCTCGCCGTTGTCACTTTGCTACGATTCTGGCGGCGATTTTATAGTGTTTGGCAACTTCTT TTATTGGTAGTTGCTTTGTTATTGTTAGCAAATCCCTTAATTGTTTTATCCAGTAGCTTTTGGCTGTCAGTGAGCGCAGT CAGTGCTCTGATTATTTGGTACCAAATATTCCCCTTCTCGTTATTACACTGGCGAGGAAAAAGTCTTACAGAGGGTCCTT GGCGAAAATGTTGTTGGTTCTTTAGTCTTCTTCATTTACAACTTGGCTTATTATGGCTTTTTACCCCTGTTCAATTATTG CTTTTTCAGGGAATATCTTTAACGAGCTTTATGGCGAATGTGCTTGTCGTCCCTATTTATAGTGTGATTTTAGTACCATT GATTTTATTTGCGGTGATCACACAAGGGGCTTTTTCCTCTTGGTTTCTCGCAAATACTGTCGCGAAACAGGTCACGATAC TTTTAACGCCATTACAATCCCATTGGGTTGTCTTCTCACAGCGGGAAATACTCTGTCTGATCGCGATCTTAGCTTTAAGC TTTATTATATTGATTTGGTATCTGTATGATTTTAAAAAAGAATCACTTAAGTGCTATATCAAAGTGCCGCGTTTTTTTCA TCTTCATCAAATGCGACAGTTAAATCCGTCTTTAAAATGGAAAATTTATTCCCTTGCTACAGTCATCAGTCTTTATTGTT TTTTACAGGTACTTTATAAGGAGATATCTCAACCCCTTTGGCGTTTAGATACGCTCGATGTGGGGCAGGGGTTAGCTAAC TTGATTGTCGTGAATGGGAAAGGGGTTTTGTATGATACGGGGGCGTCTTGGGCAGGAGGAAGTATGGCGGAACTGGAAAT TATACCTTATTTACAAAGAGAGGGGATTGCGTTAGAACAGGTGATTTTAAGTCATGATGATAATGATCATGTTGGGGGCG CGGAAACAATTCTAAAACATTACCCTCAAGCGAAGCTGATGACAGCGTCTGCTCAACATTACGGAAAAACTGACCGCACT TTTTGTGAAGCCGGCAAAACTTGGACTTGGCAACACTTAACATTCAAAGCCCTTTCACCGACTAAAACAGTGAAGCGAGC GAAAAATACGGACTCTTGTGTGTTACTGATCTCAGATGGTTCTTATCATATCCTTTTAACGGGCGATGCAGATATTGCTG CGGAAAAGCAGTTCGTGAAGCAGTTAAGTCAACTTGATGTATTACAAGTTGGACATCATGGCAGTAAAACCTCAACTGGA TATGAACTGCTTTATCAAACACGACCAAAAATCGCGCTGATTTCAAGTGGTCGTTGGAATCCATGGCAATTTCCACATGT TCAGGTTGTACAACGACTTAAACGTTATCAAACGACAGTATATAACACTGGCGAGTTAGGACAAATTAGCTTACTTTTTC ATGCAAAACACATCGAAATTCAAACCGCAAGAAAGGATTTTTCGCCTTGGTATCGTAGATTAATTGGCTTGTAA
Upstream 100 bases:
>100_bases CTGGTTTTTGAGATCTAGATTACAAAATGGGAGTCAAAATTTACTCGCTTTCCGCTTTGTAGATAATGATTTCGTTTTTT TATAAACAAGTGTGGAACGC
Downstream 100 bases:
>100_bases ACAAAATAAAGGTACAATGTCGCCCAATTTAATTTGAAAGCGAAAAAAATTTATGCAAGATAAAGATCTTTCAACAGTAC AGACATTTAAACGGTTATGG
Product: Rec2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MKNTLLSISVVTVFSACSLLWLPEHVLLHWHMTLLVFVLLLVSIIICVLCGKNHWISPLIFVLSSVGILGYIHDQARQTL LQADLIAQLPRKIETEFKIIEVLQQKNYQTFVVSAQLIPQQAKQKMFLQWHAQEKAQIGEVWKGELRLRPISSRLNMGGF DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLQETIKQTSTLDYQGLLIALAFGERAWLPTDIWQTYQKTSTAHVIAI SGLHIGLAMGIGYFFIRFIQFVLPLKWVTPTLPIFVGLLFAWFYAELAGFTIPTTRAFFALAVVTLLRFWRRFYSVWQLL LLVVALLLLANPLIVLSSSFWLSVSAVSALIIWYQIFPFSLLHWRGKSLTEGPWRKCCWFFSLLHLQLGLLWLFTPVQLL LFQGISLTSFMANVLVVPIYSVILVPLILFAVITQGAFSSWFLANTVAKQVTILLTPLQSHWVVFSQREILCLIAILALS FIILIWYLYDFKKESLKCYIKVPRFFHLHQMRQLNPSLKWKIYSLATVISLYCFLQVLYKEISQPLWRLDTLDVGQGLAN LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIALEQVILSHDDNDHVGGAETILKHYPQAKLMTASAQHYGKTDRT FCEAGKTWTWQHLTFKALSPTKTVKRAKNTDSCVLLISDGSYHILLTGDADIAAEKQFVKQLSQLDVLQVGHHGSKTSTG YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTTVYNTGELGQISLLFHAKHIEIQTARKDFSPWYRRLIGL
Sequences:
>Translated_797_residues MKNTLLSISVVTVFSACSLLWLPEHVLLHWHMTLLVFVLLLVSIIICVLCGKNHWISPLIFVLSSVGILGYIHDQARQTL LQADLIAQLPRKIETEFKIIEVLQQKNYQTFVVSAQLIPQQAKQKMFLQWHAQEKAQIGEVWKGELRLRPISSRLNMGGF DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLQETIKQTSTLDYQGLLIALAFGERAWLPTDIWQTYQKTSTAHVIAI SGLHIGLAMGIGYFFIRFIQFVLPLKWVTPTLPIFVGLLFAWFYAELAGFTIPTTRAFFALAVVTLLRFWRRFYSVWQLL LLVVALLLLANPLIVLSSSFWLSVSAVSALIIWYQIFPFSLLHWRGKSLTEGPWRKCCWFFSLLHLQLGLLWLFTPVQLL LFQGISLTSFMANVLVVPIYSVILVPLILFAVITQGAFSSWFLANTVAKQVTILLTPLQSHWVVFSQREILCLIAILALS FIILIWYLYDFKKESLKCYIKVPRFFHLHQMRQLNPSLKWKIYSLATVISLYCFLQVLYKEISQPLWRLDTLDVGQGLAN LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIALEQVILSHDDNDHVGGAETILKHYPQAKLMTASAQHYGKTDRT FCEAGKTWTWQHLTFKALSPTKTVKRAKNTDSCVLLISDGSYHILLTGDADIAAEKQFVKQLSQLDVLQVGHHGSKTSTG YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTTVYNTGELGQISLLFHAKHIEIQTARKDFSPWYRRLIGL >Mature_797_residues MKNTLLSISVVTVFSACSLLWLPEHVLLHWHMTLLVFVLLLVSIIICVLCGKNHWISPLIFVLSSVGILGYIHDQARQTL LQADLIAQLPRKIETEFKIIEVLQQKNYQTFVVSAQLIPQQAKQKMFLQWHAQEKAQIGEVWKGELRLRPISSRLNMGGF DKQQWYFAKGITAYATVKSAVKISEQLSWREKWLQETIKQTSTLDYQGLLIALAFGERAWLPTDIWQTYQKTSTAHVIAI SGLHIGLAMGIGYFFIRFIQFVLPLKWVTPTLPIFVGLLFAWFYAELAGFTIPTTRAFFALAVVTLLRFWRRFYSVWQLL LLVVALLLLANPLIVLSSSFWLSVSAVSALIIWYQIFPFSLLHWRGKSLTEGPWRKCCWFFSLLHLQLGLLWLFTPVQLL LFQGISLTSFMANVLVVPIYSVILVPLILFAVITQGAFSSWFLANTVAKQVTILLTPLQSHWVVFSQREILCLIAILALS FIILIWYLYDFKKESLKCYIKVPRFFHLHQMRQLNPSLKWKIYSLATVISLYCFLQVLYKEISQPLWRLDTLDVGQGLAN LIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIALEQVILSHDDNDHVGGAETILKHYPQAKLMTASAQHYGKTDRT FCEAGKTWTWQHLTFKALSPTKTVKRAKNTDSCVLLISDGSYHILLTGDADIAAEKQFVKQLSQLDVLQVGHHGSKTSTG YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTTVYNTGELGQISLLFHAKHIEIQTARKDFSPWYRRLIGL
Specific function: Might contribute to transformation as a member of a membrane-bound pore complex at the base of the transformasome. It could directly interact with transforming DNA during translocation indirectly by participating in the assembly of the pore [H]
COG id: COG0658
COG function: function code R; Predicted membrane metal-binding protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081801, Length=672, Percent_Identity=33.0357142857143, Blast_Score=319, Evalue=5e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR004477 - InterPro: IPR004797 [H]
Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 91179; Mature: 91179
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLLSISVVTVFSACSLLWLPEHVLLHWHMTLLVFVLLLVSIIICVLCGKNHWISPLI CCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH FVLSSVGILGYIHDQARQTLLQADLIAQLPRKIETEFKIIEVLQQKNYQTFVVSAQLIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH QAKQKMFLQWHAQEKAQIGEVWKGELRLRPISSRLNMGGFDKQQWYFAKGITAYATVKSA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCEEHHCCCHHHHHHHHH VKISEQLSWREKWLQETIKQTSTLDYQGLLIALAFGERAWLPTDIWQTYQKTSTAHVIAI HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEE SGLHIGLAMGIGYFFIRFIQFVLPLKWVTPTLPIFVGLLFAWFYAELAGFTIPTTRAFFA ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LAVVTLLRFWRRFYSVWQLLLLVVALLLLANPLIVLSSSFWLSVSAVSALIIWYQIFPFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHH LLHWRGKSLTEGPWRKCCWFFSLLHLQLGLLWLFTPVQLLLFQGISLTSFMANVLVVPIY HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SVILVPLILFAVITQGAFSSWFLANTVAKQVTILLTPLQSHWVVFSQREILCLIAILALS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECHHCEEEECCHHHHHHHHHHHHH FIILIWYLYDFKKESLKCYIKVPRFFHLHQMRQLNPSLKWKIYSLATVISLYCFLQVLYK HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EISQPLWRLDTLDVGQGLANLIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIALEQ HHCCHHHHCCHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECHHHHCCCHHHH VILSHDDNDHVGGAETILKHYPQAKLMTASAQHYGKTDRTFCEAGKTWTWQHLTFKALSP HHHHCCCCCCCCHHHHHHHHCCCHHHEEHHHHHCCCCCHHHHHCCCCEEEEEEEEEECCC TKTVKRAKNTDSCVLLISDGSYHILLTGDADIAAEKQFVKQLSQLDVLQVGHHGSKTSTG HHHHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCC YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTTVYNTGELGQISLLFHAKHIEI HHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHEEE QTARKDFSPWYRRLIGL EHHHHHCCHHHHHHHCC >Mature Secondary Structure MKNTLLSISVVTVFSACSLLWLPEHVLLHWHMTLLVFVLLLVSIIICVLCGKNHWISPLI CCCCEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH FVLSSVGILGYIHDQARQTLLQADLIAQLPRKIETEFKIIEVLQQKNYQTFVVSAQLIPQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHH QAKQKMFLQWHAQEKAQIGEVWKGELRLRPISSRLNMGGFDKQQWYFAKGITAYATVKSA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCCCEEHHCCCHHHHHHHHH VKISEQLSWREKWLQETIKQTSTLDYQGLLIALAFGERAWLPTDIWQTYQKTSTAHVIAI HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEE SGLHIGLAMGIGYFFIRFIQFVLPLKWVTPTLPIFVGLLFAWFYAELAGFTIPTTRAFFA ECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LAVVTLLRFWRRFYSVWQLLLLVVALLLLANPLIVLSSSFWLSVSAVSALIIWYQIFPFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHH LLHWRGKSLTEGPWRKCCWFFSLLHLQLGLLWLFTPVQLLLFQGISLTSFMANVLVVPIY HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH SVILVPLILFAVITQGAFSSWFLANTVAKQVTILLTPLQSHWVVFSQREILCLIAILALS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECHHCEEEECCHHHHHHHHHHHHH FIILIWYLYDFKKESLKCYIKVPRFFHLHQMRQLNPSLKWKIYSLATVISLYCFLQVLYK HHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EISQPLWRLDTLDVGQGLANLIVVNGKGVLYDTGASWAGGSMAELEIIPYLQREGIALEQ HHCCHHHHCCHHHHCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECHHHHCCCHHHH VILSHDDNDHVGGAETILKHYPQAKLMTASAQHYGKTDRTFCEAGKTWTWQHLTFKALSP HHHHCCCCCCCCHHHHHHHHCCCHHHEEHHHHHCCCCCHHHHHCCCCEEEEEEEEEECCC TKTVKRAKNTDSCVLLISDGSYHILLTGDADIAAEKQFVKQLSQLDVLQVGHHGSKTSTG HHHHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCC YELLYQTRPKIALISSGRWNPWQFPHVQVVQRLKRYQTTVYNTGELGQISLLFHAKHIEI HHHHEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEHEEE QTARKDFSPWYRRLIGL EHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063112; 7542800 [H]