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The map label for this gene is ycaR [C]

Identifier: 15602724

GI number: 15602724

Start: 1010839

End: 1011021

Strand: Reverse

Name: ycaR [C]

Synonym: PM0859

Alternate gene names: 15602724

Gene position: 1011021-1010839 (Counterclockwise)

Preceding gene: 15602725

Following gene: 15602723

Centisome position: 44.79

GC content: 41.53

Gene sequence:

>183_bases
ATGGATTCAACATTATTAGAGATTGTCGCTTGTCCTATTTGTCATGGGCGTTTAGCGCTTGATCAAACCAGCCAGAAATT
AGTCTGTCATTTTGATAAAGTTGCTTATGACATCAATCAAGGTATCCCGGTATTGTTAGCGGAACAAGCCATGCCTTTAT
CCGCAAGACAAGAGGAGCCGTAA

Upstream 100 bases:

>100_bases
GGTGGTATGTCCCCGTAGAGGCAGAGATTAAAGGTGAAAAAGTGCGGTCATTTTTGGCAAAATTTGATGAAATTCGCAAA
ACAGTATGAAGTGAGGAAAC

Downstream 100 bases:

>100_bases
TATGACAAATTTTACGGTCATTATCCCTGCACGTTATGCGTCAACACGTTTACCTGGGAAACCTTTAGCGGAGATTGCGG
GAAAACCGATGATTGCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MDSTLLEIVACPICHGRLALDQTSQKLVCHFDKVAYDINQGIPVLLAEQAMPLSARQEEP

Sequences:

>Translated_60_residues
MDSTLLEIVACPICHGRLALDQTSQKLVCHFDKVAYDINQGIPVLLAEQAMPLSARQEEP
>Mature_60_residues
MDSTLLEIVACPICHGRLALDQTSQKLVCHFDKVAYDINQGIPVLLAEQAMPLSARQEEP

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

Organism=Escherichia coli, GI1787146, Length=59, Percent_Identity=45.7627118644068, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y859_PASMU (Q9CMG9)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245796.1
- ProteinModelPortal:   Q9CMG9
- SMR:   Q9CMG9
- GeneID:   1244206
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0859
- NMPDR:   fig|272843.1.peg.859
- HOGENOM:   HBG713593
- OMA:   YDSENEQ
- BioCyc:   PMUL272843:PM0859-MONOMER
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 6622; Mature: 6622

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTLLEIVACPICHGRLALDQTSQKLVCHFDKVAYDINQGIPVLLAEQAMPLSARQEEP
CCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDSTLLEIVACPICHGRLALDQTSQKLVCHFDKVAYDINQGIPVLLAEQAMPLSARQEEP
CCCHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100