| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is 15602707
Identifier: 15602707
GI number: 15602707
Start: 994008
End: 994376
Strand: Direct
Name: 15602707
Synonym: PM0842
Alternate gene names: NA
Gene position: 994008-994376 (Clockwise)
Preceding gene: 15602706
Following gene: 15602728
Centisome position: 44.03
GC content: 36.04
Gene sequence:
>369_bases ATGGCATATTATCTTATTTATCTACACATTGCTTGTGCCTTTCTCAGCCTCAGTCTATTTATTATCCGTGGCATGATGCA ATTAACAGGCAAAAATTGGCGAGACAGAAAAGTATTAAAAATCTTACCGCACTTAAGTGATACGCTGTTGTTCTGTTCGG GAATTGGGCTATTTCTTCTTTTTCAGCAAAGTGTAACAACATGGTTCATTTACAAAATGCTCTTTATCGCCCTTTATATT GTCGTTGCTACCATTTTCTTTAGCCGAAAAAGGCTAACATCACCTTTCAGCCAAAAGAAAAATCGCTTCTACTTTATTAC GGCACTCATCTTCTTTCTCAGTACCATGGTTATTGCTTATTTGAAATAA
Upstream 100 bases:
>100_bases TGCGGTCGAAAGCGCAGAAAGTTAAATTCATTCACTAAATACGATATTATTTTAAAGCAGTAGCCTCGCTACTGCTTTCT TTATCTTAGGAAAAAAATCG
Downstream 100 bases:
>100_bases CATCTATATCTCAATCAATAGCGCAAAATGGCTTAGTTTGTTCGACTAAGCCTCTATCCTTGAGCGTTTTAATTCATATT GTTGTCTATTCTGTATTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MAYYLIYLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLFLLFQQSVTTWFIYKMLFIALYI VVATIFFSRKRLTSPFSQKKNRFYFITALIFFLSTMVIAYLK
Sequences:
>Translated_122_residues MAYYLIYLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLFLLFQQSVTTWFIYKMLFIALYI VVATIFFSRKRLTSPFSQKKNRFYFITALIFFLSTMVIAYLK >Mature_121_residues AYYLIYLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLFLLFQQSVTTWFIYKMLFIALYIV VATIFFSRKRLTSPFSQKKNRFYFITALIFFLSTMVIAYLK
Specific function: Unknown
COG id: COG3094
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007360 [H]
Pfam domain/function: PF04247 SirB [H]
EC number: NA
Molecular weight: Translated: 14406; Mature: 14275
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYYLIYLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLFLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FQQSVTTWFIYKMLFIALYIVVATIFFSRKRLTSPFSQKKNRFYFITALIFFLSTMVIAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHH LK CC >Mature Secondary Structure AYYLIYLHIACAFLSLSLFIIRGMMQLTGKNWRDRKVLKILPHLSDTLLFCSGIGLFLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FQQSVTTWFIYKMLFIALYIVVATIFFSRKRLTSPFSQKKNRFYFITALIFFLSTMVIAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHH LK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]