| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is yjhB [C]
Identifier: 15602700
GI number: 15602700
Start: 984879
End: 986096
Strand: Direct
Name: yjhB [C]
Synonym: PM0835
Alternate gene names: 15602700
Gene position: 984879-986096 (Clockwise)
Preceding gene: 15602693
Following gene: 15602702
Centisome position: 43.63
GC content: 44.99
Gene sequence:
>1218_bases ATGAATGACAATGTCAATAAAGACGGCTGGAAAGCTTTATTAGGATCTGCTGTCGGCTATGCAATGGATGGTTTCGATCT TCTTATCTTAGGTTTTATGTTATCGGCGATTTCTGCCGATCTCGCCTTAACCCCCGCCCAATCGGGCTCACTTGTCACTT GGACACTGATTGGCGCTGTCGCCGGTGGCATTATTTTTGGCGCACTCAGTGATAAATACGGTCGTGTACGTGTTTTAACG TGGACAATTGTACTCTTTGCGGTCTTTACCGGACTGTGTGCTTTTGCACAAGGTTACTGGGATCTCTTGATTTACCGTAC CATTGCTGGCATCGGTCTTGGTGGCGAATTTGGTATCGGTATGGCATTAGCCGCTGAAGCCTGGCCGGCACGTCATCGTG CTAAAGCCTCTTCTTATGTTGCCCTAGGTTGGCAAGTGGGTGTACTGGGTGCCGCACTTCTCACACCGTTATTATTACCG CACATTGGCTGGCGCGGCATGTTCTTGGTGGGCATTTTCCCTGCATTTGTCGCATGGTATTTACGTGCCAAATTGCATGA ACCAGAAATTTTTGTCAAAAAACAGACCGCACTTGAGCGTCAGAAAACTTCTCGTTTAGAGCCTTTCCGCTTACTGATTA AAGATAAAGCGACAGCAAAAATTAGTGCCGGGATCGTGGTATTAACCTCGGTACAAAACTTCGGTTATTACGGGATCATG ATTTGGATGCCAAATTTCTTATCAAAACAACTGGGATTTAGCTTGACCAAATCAGGTGTCTGGACCGCTGTCACTATTTG CGGGATGATGTTTGGTATTTGGTTATTCGGTCAACTTGCTGACCGCATTGGGCGTAAACCAAGTTTCTTACTCTTCCAAT TCGGTGCGGTGATCAGTATTTTTACCTATTCTCAAATGTCAGATCCAACCTATATGTTGTTTGCTGGGGCAGTTTTAGGG ATGTTCGTCAACGGGATGATGGGGGGCTATGGTGCATTGATGTCAGAGGCATACCCAACACAGGCTCGTGCCACAGCACA AAATGTATTATTTAACTTAGGACGTGCTGTTGGAGGATTTGGACCAATTGTGGTCGGCGCATTAGTTTCAACTTACTCTT TCCAATTGGCAATCGCTTTCTTAGCCAGTATTTACATTATCGATATGATTGCGACAATCTTCTTGATTCCAGAATTAAAA GGTAAACAATTGGATTAA
Upstream 100 bases:
>100_bases AAGCCGTCAAAAATCCGTAAACTACGCGACAATTTCTCATTCTGAGAAACCCCTCCTCCAACTTTAATGGGCTACCAGAG AGTAGCAAAAGGATCAAAAA
Downstream 100 bases:
>100_bases TCATACAAAAAAAGCGCGGTTCAATTTGACTTGAACCGCTTTTGATCATTCTTTCTTCAACAAGACTTCGTGCGCTTGTT TTTGTTCTTTCATCTTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MNDNVNKDGWKALLGSAVGYAMDGFDLLILGFMLSAISADLALTPAQSGSLVTWTLIGAVAGGIIFGALSDKYGRVRVLT WTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIGMALAAEAWPARHRAKASSYVALGWQVGVLGAALLTPLLLP HIGWRGMFLVGIFPAFVAWYLRAKLHEPEIFVKKQTALERQKTSRLEPFRLLIKDKATAKISAGIVVLTSVQNFGYYGIM IWMPNFLSKQLGFSLTKSGVWTAVTICGMMFGIWLFGQLADRIGRKPSFLLFQFGAVISIFTYSQMSDPTYMLFAGAVLG MFVNGMMGGYGALMSEAYPTQARATAQNVLFNLGRAVGGFGPIVVGALVSTYSFQLAIAFLASIYIIDMIATIFLIPELK GKQLD
Sequences:
>Translated_405_residues MNDNVNKDGWKALLGSAVGYAMDGFDLLILGFMLSAISADLALTPAQSGSLVTWTLIGAVAGGIIFGALSDKYGRVRVLT WTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIGMALAAEAWPARHRAKASSYVALGWQVGVLGAALLTPLLLP HIGWRGMFLVGIFPAFVAWYLRAKLHEPEIFVKKQTALERQKTSRLEPFRLLIKDKATAKISAGIVVLTSVQNFGYYGIM IWMPNFLSKQLGFSLTKSGVWTAVTICGMMFGIWLFGQLADRIGRKPSFLLFQFGAVISIFTYSQMSDPTYMLFAGAVLG MFVNGMMGGYGALMSEAYPTQARATAQNVLFNLGRAVGGFGPIVVGALVSTYSFQLAIAFLASIYIIDMIATIFLIPELK GKQLD >Mature_405_residues MNDNVNKDGWKALLGSAVGYAMDGFDLLILGFMLSAISADLALTPAQSGSLVTWTLIGAVAGGIIFGALSDKYGRVRVLT WTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIGMALAAEAWPARHRAKASSYVALGWQVGVLGAALLTPLLLP HIGWRGMFLVGIFPAFVAWYLRAKLHEPEIFVKKQTALERQKTSRLEPFRLLIKDKATAKISAGIVVLTSVQNFGYYGIM IWMPNFLSKQLGFSLTKSGVWTAVTICGMMFGIWLFGQLADRIGRKPSFLLFQFGAVISIFTYSQMSDPTYMLFAGAVLG MFVNGMMGGYGALMSEAYPTQARATAQNVLFNLGRAVGGFGPIVVGALVSTYSFQLAIAFLASIYIIDMIATIFLIPELK GKQLD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI7662270, Length=157, Percent_Identity=33.7579617834395, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI24308167, Length=449, Percent_Identity=22.4944320712695, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI262399383, Length=123, Percent_Identity=36.5853658536585, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI216548223, Length=146, Percent_Identity=28.0821917808219, Blast_Score=69, Evalue=8e-12, Organism=Escherichia coli, GI87082404, Length=375, Percent_Identity=30.1333333333333, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI87082231, Length=200, Percent_Identity=34.5, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI1790550, Length=421, Percent_Identity=26.3657957244656, Blast_Score=108, Evalue=9e-25, Organism=Escherichia coli, GI87081723, Length=353, Percent_Identity=28.8951841359773, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788068, Length=402, Percent_Identity=24.6268656716418, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788292, Length=426, Percent_Identity=25.8215962441315, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786229, Length=441, Percent_Identity=22.9024943310658, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082159, Length=134, Percent_Identity=30.5970149253731, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789152, Length=415, Percent_Identity=22.8915662650602, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87082320, Length=360, Percent_Identity=25.5555555555556, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI32564663, Length=428, Percent_Identity=22.6635514018692, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24640198, Length=475, Percent_Identity=22.5263157894737, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640196, Length=475, Percent_Identity=22.5263157894737, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24640200, Length=475, Percent_Identity=22.5263157894737, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43826; Mature: 43826
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDNVNKDGWKALLGSAVGYAMDGFDLLILGFMLSAISADLALTPAQSGSLVTWTLIGAV CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCEEHHHHHHHH AGGIIFGALSDKYGRVRVLTWTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIG HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH MALAAEAWPARHRAKASSYVALGWQVGVLGAALLTPLLLPHIGWRGMFLVGIFPAFVAWY HHHHHHHCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LRAKLHEPEIFVKKQTALERQKTSRLEPFRLLIKDKATAKISAGIVVLTSVQNFGYYGIM HHHHCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCEEEEEECCCCCEEEEE IWMPNFLSKQLGFSLTKSGVWTAVTICGMMFGIWLFGQLADRIGRKPSFLLFQFGAVISI EECCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FTYSQMSDPTYMLFAGAVLGMFVNGMMGGYGALMSEAYPTQARATAQNVLFNLGRAVGGF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH GPIVVGALVSTYSFQLAIAFLASIYIIDMIATIFLIPELKGKQLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNDNVNKDGWKALLGSAVGYAMDGFDLLILGFMLSAISADLALTPAQSGSLVTWTLIGAV CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCEEHHHHHHHH AGGIIFGALSDKYGRVRVLTWTIVLFAVFTGLCAFAQGYWDLLIYRTIAGIGLGGEFGIG HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH MALAAEAWPARHRAKASSYVALGWQVGVLGAALLTPLLLPHIGWRGMFLVGIFPAFVAWY HHHHHHHCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH LRAKLHEPEIFVKKQTALERQKTSRLEPFRLLIKDKATAKISAGIVVLTSVQNFGYYGIM HHHHCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCEEEEEECCCCCEEEEE IWMPNFLSKQLGFSLTKSGVWTAVTICGMMFGIWLFGQLADRIGRKPSFLLFQFGAVISI EECCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FTYSQMSDPTYMLFAGAVLGMFVNGMMGGYGALMSEAYPTQARATAQNVLFNLGRAVGGF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCH GPIVVGALVSTYSFQLAIAFLASIYIIDMIATIFLIPELKGKQLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]