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The map label for this gene is yobD [C]

Identifier: 15602695

GI number: 15602695

Start: 979765

End: 980223

Strand: Reverse

Name: yobD [C]

Synonym: PM0830

Alternate gene names: 15602695

Gene position: 980223-979765 (Counterclockwise)

Preceding gene: 15602696

Following gene: 15602694

Centisome position: 43.42

GC content: 33.12

Gene sequence:

>459_bases
TTGATGATAATAAACGTCTTACTGTGTTTAGGTATTTTCTGCTTTTTACTTTATGCTTTTTACGATCAGTTTTTCATGGA
CTGTTGGAAAGGAAAAACCTTACTTAAGGTACATCTGAAAAAGCAGGGACAAAAGGATGCGTTAATTTTTAGTCTATTAA
TAGGCATTATCATTTACCAAACCTATACCAATCTTTCGTCGGCCACTCTGTACTTATTAACTGCTTTAATTTTACTGAGT
GTGTATGCGGCGTTTATTCGCGCCCCCATGTTACTTTTAAAAGAGAAAGGGTTTTTCTTCGGTAATATTTATTTTCAATA
TGCTGATATTCATCAGGTGAATTTGGCAGAGAATAATATTCTTGTGATTGACATGAAAAATGGGAAACGTTTGTTAGTGC
ATTTGTTGACAGATCAAGATCGTGAACAGGTTATTCAATTTTTTGGTGGTTATAAATAA

Upstream 100 bases:

>100_bases
TTCTTCTAATCTTTAATCAGATAGGGAAATAAAAAAGGCTGAATGCGTTCATCTCTTTTTTGTAAAATAAAGCTAAGTAA
GTTATTTGTGAGTAATATAA

Downstream 100 bases:

>100_bases
CAGGGGAATATATGGGAATTTATCAATTAACAGGTCGTTTACAGCATTACGTTTGGGGTGGGAAAGACTATTTACCTGCC
TTACTTGGGATGAAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQTYTNLSSATLYLLTALILLS
VYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENNILVIDMKNGKRLLVHLLTDQDREQVIQFFGGYK

Sequences:

>Translated_152_residues
MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQTYTNLSSATLYLLTALILLS
VYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENNILVIDMKNGKRLLVHLLTDQDREQVIQFFGGYK
>Mature_152_residues
MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQTYTNLSSATLYLLTALILLS
VYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENNILVIDMKNGKRLLVHLLTDQDREQVIQFFGGYK

Specific function: Unknown

COG id: COG4811

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0266 family

Homologues:

Organism=Escherichia coli, GI1788123, Length=145, Percent_Identity=39.3103448275862, Blast_Score=104, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y830_PASMU (Q9CMJ4)

Other databases:

- EMBL:   AE004439
- RefSeq:   NP_245767.1
- GeneID:   1244177
- GenomeReviews:   AE004439_GR
- KEGG:   pmu:PM0830
- NMPDR:   fig|272843.1.peg.830
- HOGENOM:   HBG391110
- OMA:   RVRNIDN
- ProtClustDB:   PRK02913
- BioCyc:   PMUL272843:PM0830-MONOMER
- HAMAP:   MF_01071
- InterPro:   IPR009328
- PIRSF:   PIRSF020687
- ProDom:   PD091196

Pfam domain/function: PF06173 DUF986

EC number: NA

Molecular weight: Translated: 17638; Mature: 17638

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd43a68c)-; HASH(0xd4e4ac0)-; HASH(0xd5e6684)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHH
TYTNLSSATLYLLTALILLSVYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENNI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEEEEEECCCCE
LVIDMKNGKRLLVHLLTDQDREQVIQFFGGYK
EEEEECCCCEEEHHHHCCCCHHHHHHHHCCCH
>Mature Secondary Structure
MMIINVLLCLGIFCFLLYAFYDQFFMDCWKGKTLLKVHLKKQGQKDALIFSLLIGIIIYQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHH
TYTNLSSATLYLLTALILLSVYAAFIRAPMLLLKEKGFFFGNIYFQYADIHQVNLAENNI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEEEEEECCCCE
LVIDMKNGKRLLVHLLTDQDREQVIQFFGGYK
EEEEECCCCEEEHHHHCCCCHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100