| Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
|---|---|
| Accession | NC_002663 |
| Length | 2,257,487 |
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The map label for this gene is dps [C]
Identifier: 15602682
GI number: 15602682
Start: 967013
End: 967492
Strand: Direct
Name: dps [C]
Synonym: PM0817
Alternate gene names: 15602682
Gene position: 967013-967492 (Clockwise)
Preceding gene: 15602681
Following gene: 15602688
Centisome position: 42.84
GC content: 36.88
Gene sequence:
>480_bases ATGGCAACAGCAATCGGTTTATGTGCAGCTTCATCAGAAAAACTGGCAAAAGAACTTAATAACTTACTCGCAAACTATCA AGTATTTTATACTAACGTACGCGGTTATCACTGGAATATTAAAGGGGTCAATTTCTTTGAATTACACGCAAAATTTGAAG AAATTTATGACGATTTAGTGGTGAAAGTTGATGAAATCGCAGAACGTATTTTAACCTTAGGTCACACGCCAAATAACGCA TACAGCCAATACCTCAGCGTTTCAACAATCAAAGAAGATATTGGTGTGAGCACCGCAAAAGAATGCTTAAAAGGCACTTT AGAAGGTTTCAAAGTGTTATTAAAACAACAACGTGAAATTTTATCGCTTGCAGGCGATGCAGACGACGAAGGTACTGCTT CACAAATGAGCGACTACATCAAAGAACAAGAAAAATTAATTTGGATGTTTACTGCTGCTTGCGAAAGTTGTAACGCATAA
Upstream 100 bases:
>100_bases TGCTGATTAAGCGTATGATATACCCATACACGCCATTCATAGGTTTTATTTGAATGACATCTGAGATTACCTAAAATAAC TAACTATTGGAGGAATAACG
Downstream 100 bases:
>100_bases TCCAATCCTTAACAAAAAATGCGATGAATGTCATGTTCATCGCATTTTTTATGACCATTTCATGAGTACTCGCTGAGGAG CAAAATAAGGGCAAATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MATAIGLCAASSEKLAKELNNLLANYQVFYTNVRGYHWNIKGVNFFELHAKFEEIYDDLVVKVDEIAERILTLGHTPNNA YSQYLSVSTIKEDIGVSTAKECLKGTLEGFKVLLKQQREILSLAGDADDEGTASQMSDYIKEQEKLIWMFTAACESCNA
Sequences:
>Translated_159_residues MATAIGLCAASSEKLAKELNNLLANYQVFYTNVRGYHWNIKGVNFFELHAKFEEIYDDLVVKVDEIAERILTLGHTPNNA YSQYLSVSTIKEDIGVSTAKECLKGTLEGFKVLLKQQREILSLAGDADDEGTASQMSDYIKEQEKLIWMFTAACESCNA >Mature_158_residues ATAIGLCAASSEKLAKELNNLLANYQVFYTNVRGYHWNIKGVNFFELHAKFEEIYDDLVVKVDEIAERILTLGHTPNNAY SQYLSVSTIKEDIGVSTAKECLKGTLEGFKVLLKQQREILSLAGDADDEGTASQMSDYIKEQEKLIWMFTAACESCNA
Specific function: Unspecifically Binds And Protects DNA From Oxidative Damage Mediated By Hydrogen Peroxide. Iron-Storage Protein. [C]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 17769; Mature: 17638
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00818 DPS_1 ; PS00819 DPS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAIGLCAASSEKLAKELNNLLANYQVFYTNVRGYHWNIKGVNFFELHAKFEEIYDDLV CCCHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHHH VKVDEIAERILTLGHTPNNAYSQYLSVSTIKEDIGVSTAKECLKGTLEGFKVLLKQQREI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LSLAGDADDEGTASQMSDYIKEQEKLIWMFTAACESCNA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATAIGLCAASSEKLAKELNNLLANYQVFYTNVRGYHWNIKGVNFFELHAKFEEIYDDLV CCHHHHHHCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCHHHHHHHHHHHHHHHH VKVDEIAERILTLGHTPNNAYSQYLSVSTIKEDIGVSTAKECLKGTLEGFKVLLKQQREI HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH LSLAGDADDEGTASQMSDYIKEQEKLIWMFTAACESCNA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]