Click here to switch to the map view.

The map label for this gene is selD [H]

Identifier: 15602655

GI number: 15602655

Start: 934368

End: 935468

Strand: Reverse

Name: selD [H]

Synonym: PM0790

Alternate gene names: 15602655

Gene position: 935468-934368 (Counterclockwise)

Preceding gene: 15602657

Following gene: 15602651

Centisome position: 41.44

GC content: 41.69

Gene sequence:

>1101_bases
ATGCAAGCCAAAATTGAGCAAAATCTTACCGCACTTGAGCAGGAAATGAATGACACAATTGCTAGTACAGTGCGTTTAAC
CCAATACAGTCATGGCGCAGGATGCGGCTGTAAAATTTCGCCGAAAGTCCTCGAAAAGATTTTACACTCTGACATGGAAA
AATGGGTAGATCCGCATCTTTTGGTGGGTAACGAAACTAAAGATGATGCTGCGGTTTATGATATTGGTAATGGGATTGGT
ATCATTAGTACCACGGATTTTTTTATGCCTATTGTCGATGACCCATTTGATTTTGGACGTATTGCCGCAACAAATGCGAT
CAGTGATATTTTTGCAATGGGAGGGAAACCGATAATGGCGATTGCAATTTTAGGTTTCCCTATTAAATTATTGCCTCCTG
AAGTGGCACAACGTATTGTTGACGGGGGGCGTTTTGCTTGTCGTCAGGCAGGGATTACGCTAGCAGGTGGACACTCGATT
GATGCGCCAGAACCGATTTTTGGTTTAGCTGTGACGGGGATAATTAACACAGATAAAGTAAAGAAAAATGCATCAGCGAC
GGCAGGTTGTAAATTGTTTTTAACAAAACCGTTAGGAATCGGTGTATTAACCACAGCGGAAAAAAAAGGCAAATTGAAAG
CAGAACATCAAGGGTTAGCAACGGAAGTGATGTGTCAAATGAATACTATAGGTGCAAAATTTGCTGAGATAGCAGGCATT
AGCGCCATGACAGATGTGACGGGATTTGGTTTATTAGGGCATTTAAGTGAGCTTTGTGAAGGCTCTGGAGTACGTGCTGA
AGTGTATTTTGATAAGATAAAAACACTTGATGGTGTACAACGTTATATTGAAAAAGGCTGTATTCCGGGCGGTACTGAAC
GTAATTTTGAAAGTTACGGACACAAAATTGGAGCAATGAGCGATTTACAAAAAGCCATTTTATGTGATCCTCAAACATCG
GGTGGGTTATTGATCGCGGTGGACGCAGACAGTGAACAACAGGTGTTGGAAATCGCTGCGGATGACAGCATTGAATTATT
TGAAGTGGGGCGATTATTTGCCAAAGAACATGACAGCCCAATTTTAATCACGGTGCTTTAA

Upstream 100 bases:

>100_bases
CTTGCAAAGTAGGACGTTTACGCTTGATCATGTTTTCTCAATGTCTTTTTTCTTTAACTGACGTATAATCAAACTAGATT
ATTGGTTAGGAGATCTGAAA

Downstream 100 bases:

>100_bases
ACTGACTATGAAAGTGAAAATCCCAAGTGAAAGACTTGGGATTTTTTTGTTATTTACTTGTTTGATTGAGTTTATTCAGA
ATCAAATTCGCCATCATTTG

Product: selenophosphate synthetase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQAKIEQNLTALEQEMNDTIASTVRLTQYSHGAGCGCKISPKVLEKILHSDMEKWVDPHLLVGNETKDDAAVYDIGNGIG
IISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMAIAILGFPIKLLPPEVAQRIVDGGRFACRQAGITLAGGHSI
DAPEPIFGLAVTGIINTDKVKKNASATAGCKLFLTKPLGIGVLTTAEKKGKLKAEHQGLATEVMCQMNTIGAKFAEIAGI
SAMTDVTGFGLLGHLSELCEGSGVRAEVYFDKIKTLDGVQRYIEKGCIPGGTERNFESYGHKIGAMSDLQKAILCDPQTS
GGLLIAVDADSEQQVLEIAADDSIELFEVGRLFAKEHDSPILITVL

Sequences:

>Translated_366_residues
MQAKIEQNLTALEQEMNDTIASTVRLTQYSHGAGCGCKISPKVLEKILHSDMEKWVDPHLLVGNETKDDAAVYDIGNGIG
IISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMAIAILGFPIKLLPPEVAQRIVDGGRFACRQAGITLAGGHSI
DAPEPIFGLAVTGIINTDKVKKNASATAGCKLFLTKPLGIGVLTTAEKKGKLKAEHQGLATEVMCQMNTIGAKFAEIAGI
SAMTDVTGFGLLGHLSELCEGSGVRAEVYFDKIKTLDGVQRYIEKGCIPGGTERNFESYGHKIGAMSDLQKAILCDPQTS
GGLLIAVDADSEQQVLEIAADDSIELFEVGRLFAKEHDSPILITVL
>Mature_366_residues
MQAKIEQNLTALEQEMNDTIASTVRLTQYSHGAGCGCKISPKVLEKILHSDMEKWVDPHLLVGNETKDDAAVYDIGNGIG
IISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMAIAILGFPIKLLPPEVAQRIVDGGRFACRQAGITLAGGHSI
DAPEPIFGLAVTGIINTDKVKKNASATAGCKLFLTKPLGIGVLTTAEKKGKLKAEHQGLATEVMCQMNTIGAKFAEIAGI
SAMTDVTGFGLLGHLSELCEGSGVRAEVYFDKIKTLDGVQRYIEKGCIPGGTERNFESYGHKIGAMSDLQKAILCDPQTS
GGLLIAVDADSEQQVLEIAADDSIELFEVGRLFAKEHDSPILITVL

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Homo sapiens, GI24797148, Length=336, Percent_Identity=31.25, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI15011844, Length=297, Percent_Identity=29.2929292929293, Blast_Score=96, Evalue=7e-20,
Organism=Escherichia coli, GI1788062, Length=331, Percent_Identity=72.5075528700906, Blast_Score=505, Evalue=1e-144,
Organism=Caenorhabditis elegans, GI17543426, Length=361, Percent_Identity=28.2548476454294, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24653602, Length=274, Percent_Identity=29.1970802919708, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24653604, Length=274, Percent_Identity=29.1970802919708, Blast_Score=102, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 38995; Mature: 38995

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKIEQNLTALEQEMNDTIASTVRLTQYSHGAGCGCKISPKVLEKILHSDMEKWVDPHL
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECHHHHHHHHHHHHHHHCCCEE
LVGNETKDDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMA
EECCCCCCCCEEEECCCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
IAILGFPIKLLPPEVAQRIVDGGRFACRQAGITLAGGHSIDAPEPIFGLAVTGIINTDKV
EEECCCCCEECCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCHHHEEEEEEECCHHH
KKNASATAGCKLFLTKPLGIGVLTTAEKKGKLKAEHQGLATEVMCQMNTIGAKFAEIAGI
HCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCC
SAMTDVTGFGLLGHLSELCEGSGVRAEVYFDKIKTLDGVQRYIEKGCIPGGTERNFESYG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
HKIGAMSDLQKAILCDPQTSGGLLIAVDADSEQQVLEIAADDSIELFEVGRLFAKEHDSP
CCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC
ILITVL
EEEEEC
>Mature Secondary Structure
MQAKIEQNLTALEQEMNDTIASTVRLTQYSHGAGCGCKISPKVLEKILHSDMEKWVDPHL
CCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECHHHHHHHHHHHHHHHCCCEE
LVGNETKDDAAVYDIGNGIGIISTTDFFMPIVDDPFDFGRIAATNAISDIFAMGGKPIMA
EECCCCCCCCEEEECCCCEEEEEECCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
IAILGFPIKLLPPEVAQRIVDGGRFACRQAGITLAGGHSIDAPEPIFGLAVTGIINTDKV
EEECCCCCEECCHHHHHHHHCCCHHHHHHCCEEEECCCCCCCCCCHHHEEEEEEECCHHH
KKNASATAGCKLFLTKPLGIGVLTTAEKKGKLKAEHQGLATEVMCQMNTIGAKFAEIAGI
HCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCC
SAMTDVTGFGLLGHLSELCEGSGVRAEVYFDKIKTLDGVQRYIEKGCIPGGTERNFESYG
HHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
HKIGAMSDLQKAILCDPQTSGGLLIAVDADSEQQVLEIAADDSIELFEVGRLFAKEHDSP
CCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC
ILITVL
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]