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The map label for this gene is phyB [H]

Identifier: 15602637

GI number: 15602637

Start: 910965

End: 912191

Strand: Reverse

Name: phyB [H]

Synonym: PM0772

Alternate gene names: 15602637

Gene position: 912191-910965 (Counterclockwise)

Preceding gene: 15602638

Following gene: 15602636

Centisome position: 40.41

GC content: 35.29

Gene sequence:

>1227_bases
ATGGATGTGCTTAAGCATAATTTAGATGAATTACTTGAATCATCAACGAACTATTTATTATTACAAGGTCCAATTGGTCC
TTTTTTTACAGAACTGTCAGCATGGCTAAAAACGTTTCACAAACAAGTATTTAAAATAAATTTTAATTCTGGTGATGAGG
CTTTTTATCCTAATTCTATTCCTCAGACTTTCGCCTACCAGGGACAGTTAGATCAGTTTGACCAGTATCTTCGTTTTTTT
TGTCACCAACATTCGATTGATGCGATCATTTGTTTTGGTGATACACGGGCTTATCATCGCATTGCTAAAATCGTTGCAGA
TAAACAGAAAATTTCGTTTTGGGTTTTTGAAGAAGGCTATTTAAGACCAGAATATGTAACTCTAGAAAAAGGGGGCGTTA
ATGATTATTCGCAATTACCTCGTCATGCTAACTTCTTTTTATCACAAGCCGCGTGTTGCTCGGAGATCTCGGCACCAGAA
AAATTAGCAAAAGGCTTTATTCCATTGGCAACTATTGCGATAAAATACTATACCAAAGCCTACTTTAATCAAGATAAATA
TCCTGATTATCAACATCATCGTATTTTAGATTTGAAATATTATATTAAGTTATGGCTAACTTCAGGAATAAAAAGAGCTT
ACTATTATTGGCAAGATCGTTCTTTTGGGAAGAAAGTAGCAGCGGGTAAATTAGGGGATTTTTTCCTCGTGCCTTTGCAA
GTGTATGATGATAGTCAAGTGAGAATACATTGTGACTATGAAAGTGTTGACGCTTTTTTAAAGGAAATCTTGGAGTCATT
TATTCATCATGCTCCAAGCGCACTTAATTTGATTATCAAGCATCACCCAATGGATAGGGGATTTGTCGATTATGGGCATG
TAATTAAACAATATAAAACACAATATCCCGCGTTTAAAAAGCGAATCTTTTATGTTCATGACGTTCCGACACCCATTTTA
TTGAGAAAAGGGAAGGGAATGATTACCTTAAATAGTACAAGTGGAATTTCTGCCTTGTTACACCGTATGCCAGTTTTGAC
CTTAGGCAGAGCAAGTTACAACTTTGAAGGATTAACTTATCAAGGTAATTTGCACAGTTTCTGGCATAATAAGGGATTGC
CAGAGGCGAAAGTGTTTGACGCATATCGAAAGTATCACTTATCTAAAACACAGATTAATGGGAGTTTCTATAGCAAAGTC
ATTTTACGCTATCCTTATAATCAATAA

Upstream 100 bases:

>100_bases
ACGTCGAAAAATAAAAAATAATAAATTACATACAAATTATTTTATGAACATTTTTATGAAATTAAAAAATGTTTATTCTG
TTTTGAGGTAGTGTCTTAAT

Downstream 100 bases:

>100_bases
CTATTTTAACCTTTAAGTTCAAACTAGAGAAAATTATGTCTTTACAATTTAATACCGTCGCCTTATTACTGGTGGTTTTA
ATTTTACTGGGCGTACTCAG

Product: PhyB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MDVLKHNLDELLESSTNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSIPQTFAYQGQLDQFDQYLRFF
CHQHSIDAIICFGDTRAYHRIAKIVADKQKISFWVFEEGYLRPEYVTLEKGGVNDYSQLPRHANFFLSQAACCSEISAPE
KLAKGFIPLATIAIKYYTKAYFNQDKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
VYDDSQVRIHCDYESVDAFLKEILESFIHHAPSALNLIIKHHPMDRGFVDYGHVIKQYKTQYPAFKKRIFYVHDVPTPIL
LRKGKGMITLNSTSGISALLHRMPVLTLGRASYNFEGLTYQGNLHSFWHNKGLPEAKVFDAYRKYHLSKTQINGSFYSKV
ILRYPYNQ

Sequences:

>Translated_408_residues
MDVLKHNLDELLESSTNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSIPQTFAYQGQLDQFDQYLRFF
CHQHSIDAIICFGDTRAYHRIAKIVADKQKISFWVFEEGYLRPEYVTLEKGGVNDYSQLPRHANFFLSQAACCSEISAPE
KLAKGFIPLATIAIKYYTKAYFNQDKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
VYDDSQVRIHCDYESVDAFLKEILESFIHHAPSALNLIIKHHPMDRGFVDYGHVIKQYKTQYPAFKKRIFYVHDVPTPIL
LRKGKGMITLNSTSGISALLHRMPVLTLGRASYNFEGLTYQGNLHSFWHNKGLPEAKVFDAYRKYHLSKTQINGSFYSKV
ILRYPYNQ
>Mature_408_residues
MDVLKHNLDELLESSTNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSIPQTFAYQGQLDQFDQYLRFF
CHQHSIDAIICFGDTRAYHRIAKIVADKQKISFWVFEEGYLRPEYVTLEKGGVNDYSQLPRHANFFLSQAACCSEISAPE
KLAKGFIPLATIAIKYYTKAYFNQDKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
VYDDSQVRIHCDYESVDAFLKEILESFIHHAPSALNLIIKHHPMDRGFVDYGHVIKQYKTQYPAFKKRIFYVHDVPTPIL
LRKGKGMITLNSTSGISALLHRMPVLTLGRASYNFEGLTYQGNLHSFWHNKGLPEAKVFDAYRKYHLSKTQINGSFYSKV
ILRYPYNQ

Specific function: Involved in the phospholipid modification of the capsular polysaccharide, a strong requirement for its translocation to the cell surface [H]

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007833 [H]

Pfam domain/function: PF05159 Capsule_synth [H]

EC number: NA

Molecular weight: Translated: 47576; Mature: 47576

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLKHNLDELLESSTNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSI
CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
PQTFAYQGQLDQFDQYLRFFCHQHSIDAIICFGDTRAYHRIAKIVADKQKISFWVFEEGY
CCHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCC
LRPEYVTLEKGGVNDYSQLPRHANFFLSQAACCSEISAPEKLAKGFIPLATIAIKYYTKA
CCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
YFNQDKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
HCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHCCCCCCEEEEEEE
VYDDSQVRIHCDYESVDAFLKEILESFIHHAPSALNLIIKHHPMDRGFVDYGHVIKQYKT
EECCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHEEHHEECCCCCCCHHHHHHHHHHHH
QYPAFKKRIFYVHDVPTPILLRKGKGMITLNSTSGISALLHRMPVLTLGRASYNFEGLTY
HCCHHHHEEEEEECCCCCEEEECCCCEEEEECCCHHHHHHHHCCCEEECCCCCCCCCEEE
QGNLHSFWHNKGLPEAKVFDAYRKYHLSKTQINGSFYSKVILRYPYNQ
ECCCHHHHHCCCCCHHHHHHHHHHHCCCCEEECCHHHEEEEEECCCCC
>Mature Secondary Structure
MDVLKHNLDELLESSTNYLLLQGPIGPFFTELSAWLKTFHKQVFKINFNSGDEAFYPNSI
CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
PQTFAYQGQLDQFDQYLRFFCHQHSIDAIICFGDTRAYHRIAKIVADKQKISFWVFEEGY
CCHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCC
LRPEYVTLEKGGVNDYSQLPRHANFFLSQAACCSEISAPEKLAKGFIPLATIAIKYYTKA
CCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
YFNQDKYPDYQHHRILDLKYYIKLWLTSGIKRAYYYWQDRSFGKKVAAGKLGDFFLVPLQ
HCCCCCCCCCCCCEEEHHHHHHHHHHHHCCHHHEEEECCCCCCCHHHCCCCCCEEEEEEE
VYDDSQVRIHCDYESVDAFLKEILESFIHHAPSALNLIIKHHPMDRGFVDYGHVIKQYKT
EECCCEEEEEECHHHHHHHHHHHHHHHHHCCCHHHEEHHEECCCCCCCHHHHHHHHHHHH
QYPAFKKRIFYVHDVPTPILLRKGKGMITLNSTSGISALLHRMPVLTLGRASYNFEGLTY
HCCHHHHEEEEEECCCCCEEEECCCCEEEEECCCHHHHHHHHCCCEEECCCCCCCCCEEE
QGNLHSFWHNKGLPEAKVFDAYRKYHLSKTQINGSFYSKVILRYPYNQ
ECCCHHHHHCCCCCHHHHHHHHHHHCCCCEEECCHHHEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]