Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 15602137

GI number: 15602137

Start: 308725

End: 309354

Strand: Direct

Name: ycbL [C]

Synonym: PM0272

Alternate gene names: 15602137

Gene position: 308725-309354 (Clockwise)

Preceding gene: 15602136

Following gene: 15602142

Centisome position: 13.68

GC content: 41.75

Gene sequence:

>630_bases
ATGAATATTGAAATTATTCCGGTCACCGCTTTTCAGCAAAATTGTTCTTTAATTTGGGATGAGAAGCGTAATGCGGCAAT
TATTGATCCCGGTGGTGACGCGGAAAAATTGATTAAGCGAATTGAAGAGTTGGACTTGAATTTACAAGCTATTTTATTGA
CACATGGACATCTTGACCATGTGGGAGCGGCACCAAAATTGAAGGCGCATTTTAACGTAGAGATAATTGGTCCTAATTCA
CAAGATGAATACTGGTTTAATGCATTACCAGCACAATCGCAAAAATTTGGTCTGTTTGAAATTCCAGCCTTTACGCCAGA
TCGTTGGTTAAATAACGAAGGCGAGATTATCCAAGTTGGGGATATGCAATTTGAAGTACTGCACCTACCAGGACACACCC
CGGGGCATATTGGGTTTATCGAACACGAAAAGCGAATTGCCTTTACTGGTGATGTGCTCTTTAAGCAAAGTATTGGGCGC
ACGGATTTTCAAGGGGGCGATCACGCGACCTTGTTGAGTGTTATTAAAGAGAAATTATATCCTTTAGGCGATGACATGAT
TATTGTTGCTGGGCATGGACCCTATACCACTATCGGTCAAGAAAAGCAGCACAATCCCTTTGTGCGCTAA

Upstream 100 bases:

>100_bases
TCCTGTTCGTACATGGCGTGGCAGTTGATAAAATAAAACTTTTCCGTATTGAACCGCACTTTTGTGCGGTTTTCTTCTTA
TTTAGTCATAGAGAGATAGC

Downstream 100 bases:

>100_bases
ATGCGAGAAAGAAAAAGCCCCTGTTATCAGGGGCTTTTAGCTTAACATTGAGTAAACTTAATGAATCCCCATCCAATTTG
GTAACGCCATTGAAATCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNIEIIPVTAFQQNCSLIWDEKRNAAIIDPGGDAEKLIKRIEELDLNLQAILLTHGHLDHVGAAPKLKAHFNVEIIGPNS
QDEYWFNALPAQSQKFGLFEIPAFTPDRWLNNEGEIIQVGDMQFEVLHLPGHTPGHIGFIEHEKRIAFTGDVLFKQSIGR
TDFQGGDHATLLSVIKEKLYPLGDDMIIVAGHGPYTTIGQEKQHNPFVR

Sequences:

>Translated_209_residues
MNIEIIPVTAFQQNCSLIWDEKRNAAIIDPGGDAEKLIKRIEELDLNLQAILLTHGHLDHVGAAPKLKAHFNVEIIGPNS
QDEYWFNALPAQSQKFGLFEIPAFTPDRWLNNEGEIIQVGDMQFEVLHLPGHTPGHIGFIEHEKRIAFTGDVLFKQSIGR
TDFQGGDHATLLSVIKEKLYPLGDDMIIVAGHGPYTTIGQEKQHNPFVR
>Mature_209_residues
MNIEIIPVTAFQQNCSLIWDEKRNAAIIDPGGDAEKLIKRIEELDLNLQAILLTHGHLDHVGAAPKLKAHFNVEIIGPNS
QDEYWFNALPAQSQKFGLFEIPAFTPDRWLNNEGEIIQVGDMQFEVLHLPGHTPGHIGFIEHEKRIAFTGDVLFKQSIGR
TDFQGGDHATLLSVIKEKLYPLGDDMIIVAGHGPYTTIGQEKQHNPFVR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=202, Percent_Identity=28.7128712871287, Blast_Score=78, Evalue=5e-15,
Organism=Escherichia coli, GI1787158, Length=210, Percent_Identity=56.1904761904762, Blast_Score=253, Evalue=7e-69,
Organism=Caenorhabditis elegans, GI17538952, Length=187, Percent_Identity=34.2245989304813, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23418; Mature: 23418

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEIIPVTAFQQNCSLIWDEKRNAAIIDPGGDAEKLIKRIEELDLNLQAILLTHGHLDH
CCEEEEEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHH
VGAAPKLKAHFNVEIIGPNSQDEYWFNALPAQSQKFGLFEIPAFTPDRWLNNEGEIIQVG
CCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCCHHHCCCCCCEEEEC
DMQFEVLHLPGHTPGHIGFIEHEKRIAFTGDVLFKQSIGRTDFQGGDHATLLSVIKEKLY
CCEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC
PLGDDMIIVAGHGPYTTIGQEKQHNPFVR
CCCCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIEIIPVTAFQQNCSLIWDEKRNAAIIDPGGDAEKLIKRIEELDLNLQAILLTHGHLDH
CCEEEEEEEEECCCCCEEEECCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCHHH
VGAAPKLKAHFNVEIIGPNSQDEYWFNALPAQSQKFGLFEIPAFTPDRWLNNEGEIIQVG
CCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCCCEEECCCCCCHHHCCCCCCEEEEC
DMQFEVLHLPGHTPGHIGFIEHEKRIAFTGDVLFKQSIGRTDFQGGDHATLLSVIKEKLY
CCEEEEEECCCCCCCCEEEEECCCEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHCC
PLGDDMIIVAGHGPYTTIGQEKQHNPFVR
CCCCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]