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The map label for this gene is efp [H]

Identifier: 15601965

GI number: 15601965

Start: 125434

End: 126000

Strand: Direct

Name: efp [H]

Synonym: PM0100

Alternate gene names: 15601965

Gene position: 125434-126000 (Clockwise)

Preceding gene: 15601962

Following gene: 15601968

Centisome position: 5.56

GC content: 40.92

Gene sequence:

>567_bases
ATGGCTACATATACTACCAGTGATTTCAAACCAGGTCTAAAATTTATGCAGGACGGCGAGCCTTGTGTGATCGTTGAAAA
TGAATTTGTGAAACCCGGCAAAGGTCAAGCATTCACTCGTACGCGTATTCGTAAATTAATTTCTGGCAAAGTATTAGATG
TTAACTTTAAATCTGGTACCTCTGTTGAAGCGGCGGATGTTATGGACTTAAACTTAACTTACTCCTACAAAGATGATGCC
TTCTGGTATTTTATGCACCCAGAAACATTTGAACAATACTCCGCGGATGCAAAAGCTATTGGTGATGCAGAAAAATGGTT
ATTAGACCAAGCTGATTGTATCGTGACATTATGGAATGGTGCACCAATCAGCGTTACCCCACCAAACTTTGTCGAGTTAG
AAATCATCGATACAGATCCAGGCTTAAAAGGCGATACTGCGGGTACAGGTGGTAAACCAGCGACATTAAGCACCGGTGCA
GTAGTAAAAGTGCCATTATTCGTACAAATTGGTGAAGTGATCAAAGTCGATACTCGCTCAGGTGAATATGTTTCACGTGT
GAAATAA

Upstream 100 bases:

>100_bases
TTGGCTAAGTGATCTGTCCAACTTTGTTCTTCTCTAATGGCTATGTTTTGAGTTAAAATATGCACTTTTGAAAACAATCT
CTTTATAACTTGAGGATAAT

Downstream 100 bases:

>100_bases
TCACAAAATTGTGTTGAAAAAGGCGAACCTTGTGTTCGCCTTTCATTTTTAAACTTGATATTTACTTTTATCACCGATAT
CAAAATGCAGTGGCATTTGC

Product: elongation factor P

Products: NA

Alternate protein names: EF-P [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MATYTTSDFKPGLKFMQDGEPCVIVENEFVKPGKGQAFTRTRIRKLISGKVLDVNFKSGTSVEAADVMDLNLTYSYKDDA
FWYFMHPETFEQYSADAKAIGDAEKWLLDQADCIVTLWNGAPISVTPPNFVELEIIDTDPGLKGDTAGTGGKPATLSTGA
VVKVPLFVQIGEVIKVDTRSGEYVSRVK

Sequences:

>Translated_188_residues
MATYTTSDFKPGLKFMQDGEPCVIVENEFVKPGKGQAFTRTRIRKLISGKVLDVNFKSGTSVEAADVMDLNLTYSYKDDA
FWYFMHPETFEQYSADAKAIGDAEKWLLDQADCIVTLWNGAPISVTPPNFVELEIIDTDPGLKGDTAGTGGKPATLSTGA
VVKVPLFVQIGEVIKVDTRSGEYVSRVK
>Mature_187_residues
ATYTTSDFKPGLKFMQDGEPCVIVENEFVKPGKGQAFTRTRIRKLISGKVLDVNFKSGTSVEAADVMDLNLTYSYKDDAF
WYFMHPETFEQYSADAKAIGDAEKWLLDQADCIVTLWNGAPISVTPPNFVELEIIDTDPGLKGDTAGTGGKPATLSTGAV
VKVPLFVQIGEVIKVDTRSGEYVSRVK

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI1790590, Length=188, Percent_Identity=76.063829787234, Blast_Score=299, Evalue=8e-83,
Organism=Escherichia coli, GI87082061, Length=184, Percent_Identity=27.1739130434783, Blast_Score=77, Evalue=6e-16,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20599; Mature: 20467

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYTTSDFKPGLKFMQDGEPCVIVENEFVKPGKGQAFTRTRIRKLISGKVLDVNFKSGT
CCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCC
SVEAADVMDLNLTYSYKDDAFWYFMHPETFEQYSADAKAIGDAEKWLLDQADCIVTLWNG
CEEEEEEEEEEEEEEECCCEEEEEECCHHHHHHCCCCHHCCCHHHHHHCCCCEEEEEECC
APISVTPPNFVELEIIDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS
CEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEECCEEEEECCC
GEYVSRVK
CCEEECCC
>Mature Secondary Structure 
ATYTTSDFKPGLKFMQDGEPCVIVENEFVKPGKGQAFTRTRIRKLISGKVLDVNFKSGT
CCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCC
SVEAADVMDLNLTYSYKDDAFWYFMHPETFEQYSADAKAIGDAEKWLLDQADCIVTLWNG
CEEEEEEEEEEEEEEECCCEEEEEECCHHHHHHCCCCHHCCCHHHHHHCCCCEEEEEECC
APISVTPPNFVELEIIDTDPGLKGDTAGTGGKPATLSTGAVVKVPLFVQIGEVIKVDTRS
CEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEEEEEECCEEEEECCC
GEYVSRVK
CCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA