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The map label for this gene is yddA [H]

Identifier: 15601906

GI number: 15601906

Start: 43166

End: 44860

Strand: Reverse

Name: yddA [H]

Synonym: PM0041

Alternate gene names: 15601906

Gene position: 44860-43166 (Counterclockwise)

Preceding gene: 15601908

Following gene: 15601905

Centisome position: 1.99

GC content: 36.34

Gene sequence:

>1695_bases
ATGATGGGTAGCCAATTACAAGGATTTTTCACACAATTATTTCACTTAGCGCGCATTTTTTGGGGTGATAAAAAGAACTG
GTCATCTTGGATTATTTTAGCGACTGTCATTGCGATTGGTGTCTTTATTGTTTCCTTAAATGTCATGATCAATGATTGGA
GCAAACATTTTTATGACACCTTAGCAGAATTAAACGTCCAGCTTATTTTGCCTCTTATTCAAGAATATTTAATTTATGTC
GCACTCTATATTTTAGTCAGCGTTTATCGGAGCTGGTTACGTAAGCTGTTGATTATTCGCTGGCGCCAAGCCATGACAGA
ACACTTTGTCGAACGTTGGTTTAGTAAAAAGATTTTTTATAAATTGGCACAAGAAAATAAAATGGATAATCCCGATCAAC
GTATCGCAGAAGATATTCACTTATTTGCCAAATACAGTCTAGAGCTCACCGTATCCTTTGTCCTCAATTTCGTCCAATTA
GGTTCTTTTTTAATGATCCTGTGGAATCTCTCCGGCTCCCCAACATTCAACTTATTTGGATATGATATTGTTATCAAAGG
TTACTTAGTATGGGTTGCCATTATTTATGCGTTTTTAGGGAGTGTTGTTACCCATTTAATTGGTCGTAAGCTTCATCCAC
TCAATTATAGTCAACAAGTTTACGAAGCCACTTTCCGTGGAAATTTAGTACGTCGTCATGAACATGCCGAGCAAATTGCG
TTATATGGTGGAGAGCAAACAGAAAAACGTAAATTGGCTGATGAGTTTGCGCATATTGTCAAAAATTGGCGAGCGATTAT
GGATAAAGAACGTAATCTTGGTTTCTTTACAGTAGGCTACTCTCGCTTTAGCTCAATGTTACCTGTCCTTTGTGCAATTC
CCTTACTGTTGCTTAAAATTATTACTTTTGGTGGCTTAATGCAGATCCGCAGTGCTTTTGGTACTGTATTAAGTTCATTA
AGTTGGTTTATTTATGCTTATACCATTTTACCCGAGTGGTCTGCCACCATTTCACGTTTAGCGCAATTTAACCGAGAAAT
TGAACAATTCGAAAAATCCTACTGCACACCACAGTCACCAAAAAAAGCGATGATCTCAGTTGAAAACCTTTCACTGTTTA
CATCTGATCATCAGCTGCTCTTAAAAAATATCCAGTTTTCTGTACAAGAAAAAGAATGGCTACATTTAAAAGGACAAAGT
GGTTTAGGAAAATCCAGTTTATTACGCACGTTATGTGGTATTTGGCAATATTATTCGGGACAATATCAAATATGCCTGAA
AAATCATTTATTTATTCCACAAAAAACTTATTTAAATGAAGGTAATCTCGCCGAATTATTACGTTATCCAAATCAACATC
ACTATTCACCACAAGAACTTAATCAAGTGCTTAACCTTGTGGGCTTAGAGAAATGGCAGAATCGCTTAGAGGAAGTATTA
CCTTGGCATATTGTTTTATCACATGGTGAGCAACAACGCTTAGCCTTTGCACGTATTCTTCTCACTAAACCCCAACTCTT
ATGCTTAGATGAGGCGACTTCAAATTTAGATGAAACCTCTGCCCTCTTATTAATGCAATTAATTCGTGAGCAATTACCAA
ATACCACTGTGATTTTTACTTCACATCAAACCAAAATAAGTCAATTGGCTGATCGAGAAGTGGATTTAAATAGTTATTTA
CCAGAACAGAACTAA

Upstream 100 bases:

>100_bases
TGTAAATTATTTGTTACATAAAAGTGAGTGTCATTAAAAAATACACAACAACGACTTTGTTATTTTTCTCTTATTTGGTT
TAAAGGAAACTTGTTAAACA

Downstream 100 bases:

>100_bases
ATTCCCTTTTAATGCTTTTTTATATGATTTCAACAAGTTAAAAATTGATTAAAAAAATACACTTGACATCCCCCTTTTAT
TAAAGATAATGAGAATCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: CDS102 [H]

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MMGSQLQGFFTQLFHLARIFWGDKKNWSSWIILATVIAIGVFIVSLNVMINDWSKHFYDTLAELNVQLILPLIQEYLIYV
ALYILVSVYRSWLRKLLIIRWRQAMTEHFVERWFSKKIFYKLAQENKMDNPDQRIAEDIHLFAKYSLELTVSFVLNFVQL
GSFLMILWNLSGSPTFNLFGYDIVIKGYLVWVAIIYAFLGSVVTHLIGRKLHPLNYSQQVYEATFRGNLVRRHEHAEQIA
LYGGEQTEKRKLADEFAHIVKNWRAIMDKERNLGFFTVGYSRFSSMLPVLCAIPLLLLKIITFGGLMQIRSAFGTVLSSL
SWFIYAYTILPEWSATISRLAQFNREIEQFEKSYCTPQSPKKAMISVENLSLFTSDHQLLLKNIQFSVQEKEWLHLKGQS
GLGKSSLLRTLCGIWQYYSGQYQICLKNHLFIPQKTYLNEGNLAELLRYPNQHHYSPQELNQVLNLVGLEKWQNRLEEVL
PWHIVLSHGEQQRLAFARILLTKPQLLCLDEATSNLDETSALLLMQLIREQLPNTTVIFTSHQTKISQLADREVDLNSYL
PEQN

Sequences:

>Translated_564_residues
MMGSQLQGFFTQLFHLARIFWGDKKNWSSWIILATVIAIGVFIVSLNVMINDWSKHFYDTLAELNVQLILPLIQEYLIYV
ALYILVSVYRSWLRKLLIIRWRQAMTEHFVERWFSKKIFYKLAQENKMDNPDQRIAEDIHLFAKYSLELTVSFVLNFVQL
GSFLMILWNLSGSPTFNLFGYDIVIKGYLVWVAIIYAFLGSVVTHLIGRKLHPLNYSQQVYEATFRGNLVRRHEHAEQIA
LYGGEQTEKRKLADEFAHIVKNWRAIMDKERNLGFFTVGYSRFSSMLPVLCAIPLLLLKIITFGGLMQIRSAFGTVLSSL
SWFIYAYTILPEWSATISRLAQFNREIEQFEKSYCTPQSPKKAMISVENLSLFTSDHQLLLKNIQFSVQEKEWLHLKGQS
GLGKSSLLRTLCGIWQYYSGQYQICLKNHLFIPQKTYLNEGNLAELLRYPNQHHYSPQELNQVLNLVGLEKWQNRLEEVL
PWHIVLSHGEQQRLAFARILLTKPQLLCLDEATSNLDETSALLLMQLIREQLPNTTVIFTSHQTKISQLADREVDLNSYL
PEQN
>Mature_564_residues
MMGSQLQGFFTQLFHLARIFWGDKKNWSSWIILATVIAIGVFIVSLNVMINDWSKHFYDTLAELNVQLILPLIQEYLIYV
ALYILVSVYRSWLRKLLIIRWRQAMTEHFVERWFSKKIFYKLAQENKMDNPDQRIAEDIHLFAKYSLELTVSFVLNFVQL
GSFLMILWNLSGSPTFNLFGYDIVIKGYLVWVAIIYAFLGSVVTHLIGRKLHPLNYSQQVYEATFRGNLVRRHEHAEQIA
LYGGEQTEKRKLADEFAHIVKNWRAIMDKERNLGFFTVGYSRFSSMLPVLCAIPLLLLKIITFGGLMQIRSAFGTVLSSL
SWFIYAYTILPEWSATISRLAQFNREIEQFEKSYCTPQSPKKAMISVENLSLFTSDHQLLLKNIQFSVQEKEWLHLKGQS
GLGKSSLLRTLCGIWQYYSGQYQICLKNHLFIPQKTYLNEGNLAELLRYPNQHHYSPQELNQVLNLVGLEKWQNRLEEVL
PWHIVLSHGEQQRLAFARILLTKPQLLCLDEATSNLDETSALLLMQLIREQLPNTTVIFTSHQTKISQLADREVDLNSYL
PEQN

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4826958, Length=492, Percent_Identity=25.8130081300813, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI9945308, Length=575, Percent_Identity=24.695652173913, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI4506341, Length=493, Percent_Identity=22.5152129817444, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI7262393, Length=162, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI9955963, Length=227, Percent_Identity=27.7533039647577, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI90421313, Length=202, Percent_Identity=29.2079207920792, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI42490749, Length=216, Percent_Identity=26.8518518518519, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI66529005, Length=297, Percent_Identity=25.2525252525253, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=204, Percent_Identity=27.4509803921569, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI148612844, Length=204, Percent_Identity=27.4509803921569, Blast_Score=69, Evalue=2e-11,
Organism=Homo sapiens, GI157502201, Length=307, Percent_Identity=24.1042345276873, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI4557481, Length=264, Percent_Identity=25.7575757575758, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1787772, Length=558, Percent_Identity=35.4838709677419, Blast_Score=351, Evalue=8e-98,
Organism=Escherichia coli, GI1786575, Length=345, Percent_Identity=24.3478260869565, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081834, Length=207, Percent_Identity=30.9178743961353, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787112, Length=193, Percent_Identity=30.5699481865285, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787143, Length=403, Percent_Identity=20.8436724565757, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786703, Length=235, Percent_Identity=30.6382978723404, Blast_Score=69, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17532409, Length=501, Percent_Identity=24.750499001996, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17532411, Length=497, Percent_Identity=24.5472837022133, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17564250, Length=607, Percent_Identity=23.3937397034596, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI72000520, Length=582, Percent_Identity=23.5395189003436, Blast_Score=104, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17542146, Length=537, Percent_Identity=22.7188081936685, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71992285, Length=225, Percent_Identity=27.1111111111111, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI72000518, Length=200, Percent_Identity=28.5, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17558960, Length=206, Percent_Identity=30.0970873786408, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17567243, Length=221, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115534520, Length=308, Percent_Identity=26.9480519480519, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115533592, Length=547, Percent_Identity=24.1316270566728, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25146765, Length=270, Percent_Identity=25.1851851851852, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI86564969, Length=270, Percent_Identity=25.1851851851852, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71992066, Length=270, Percent_Identity=25.1851851851852, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71992070, Length=270, Percent_Identity=25.1851851851852, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71992080, Length=270, Percent_Identity=25.1851851851852, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6321752, Length=346, Percent_Identity=24.8554913294798, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6325110, Length=133, Percent_Identity=36.8421052631579, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6322640, Length=203, Percent_Identity=27.0935960591133, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24638550, Length=514, Percent_Identity=22.568093385214, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24638552, Length=514, Percent_Identity=22.568093385214, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24638554, Length=514, Percent_Identity=22.568093385214, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24638546, Length=514, Percent_Identity=22.568093385214, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24638556, Length=514, Percent_Identity=22.568093385214, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24638548, Length=514, Percent_Identity=22.568093385214, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24638558, Length=489, Percent_Identity=22.4948875255624, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24643394, Length=507, Percent_Identity=23.8658777120316, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65708; Mature: 65708

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHCCCCCHHHCCCCCC
>Mature Secondary Structure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CCHHHHHHHHCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]