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The map label for this gene is yfgE [C]

Identifier: 15601882

GI number: 15601882

Start: 13833

End: 14597

Strand: Reverse

Name: yfgE [C]

Synonym: PM0017

Alternate gene names: 15601882

Gene position: 14597-13833 (Counterclockwise)

Preceding gene: 15601883

Following gene: 15601867

Centisome position: 0.65

GC content: 35.69

Gene sequence:

>765_bases
TTGCTTAACCCTTCATTTTTCGTTTATCCTTATTCTCCTTTTTTCGATTTTGTAGGTTGCTTTTTGTTAGAAAATTTCCA
ATTACCTTTGCCTATTCATCAACTCGATGATGAAACGCTGGATAATTTCTATCCCGACAATAATTTATTGTTGCTCAATT
CGCTACGCAAAAATTTTACTTGTCTAACACAACAATTTTTTTATATTTGGGGCGAGCAAAGCAGTGGTAAAAGTCACCTC
TTAAAAGGCATTACTCATCATTTTTTCCTTTTACAGCGCCCCGCTATCTATGTGCCCTTAGAAAAATCCCAATATTTCTC
ACCGGCGGTACTCGAAAACTTAGAACAACAACAATTGGTTTGTTTAGATAATTTGCAGGCAATTATAGGCAATACTGAAT
GGGAATTAGCGATTTTTGATTTATTTAATCGCATAAAATCTGTTGAAAATACCCTGCTTGTGATCAGTGCAAATCAATCC
CCAACTGCATTACCTGTAAGTTTACCTGACTTAGCTTCACGTTTACGCTGGGGAGAAAGCTATCAGCTGGTCCCCTTAAA
TGATCAACAAAAAATCCATGTATTGCAAAAAAATGCACATCAACGTGGTATCGAACTCCCCGATGAAGTAGCTAATTTTC
TTTTGAAACGCTTAGAGCGCGATATGAAAACGTTATTTGAAGCACTAAGTAAATTGGATAAAGCATCATTACAAGCCCAA
CGTAAATTAACGATTCCCTTTGTGAAAGAAATTTTAAAGCTATAA

Upstream 100 bases:

>100_bases
TTTATGCGCCGTTGTCGCGATTTTACTCAACTTAATCTTACCCAAAGCCAAAAACACCCCAATAGAAGAAAATCGATAAG
AGAAAATTAAGGGTTAAGTC

Downstream 100 bases:

>100_bases
AAAAAGACCACCTCTTTATCAGGTGATCTTTCTTGTCAACTAAACGTATTTTGTTTAGTTTGTTTTAATATAATGACGGC
TATATTGATAGCTTACTGTT

Product: DNA replication initiation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLNPSFFVYPYSPFFDFVGCFLLENFQLPLPIHQLDDETLDNFYPDNNLLLLNSLRKNFTCLTQQFFYIWGEQSSGKSHL
LKGITHHFFLLQRPAIYVPLEKSQYFSPAVLENLEQQQLVCLDNLQAIIGNTEWELAIFDLFNRIKSVENTLLVISANQS
PTALPVSLPDLASRLRWGESYQLVPLNDQQKIHVLQKNAHQRGIELPDEVANFLLKRLERDMKTLFEALSKLDKASLQAQ
RKLTIPFVKEILKL

Sequences:

>Translated_254_residues
MLNPSFFVYPYSPFFDFVGCFLLENFQLPLPIHQLDDETLDNFYPDNNLLLLNSLRKNFTCLTQQFFYIWGEQSSGKSHL
LKGITHHFFLLQRPAIYVPLEKSQYFSPAVLENLEQQQLVCLDNLQAIIGNTEWELAIFDLFNRIKSVENTLLVISANQS
PTALPVSLPDLASRLRWGESYQLVPLNDQQKIHVLQKNAHQRGIELPDEVANFLLKRLERDMKTLFEALSKLDKASLQAQ
RKLTIPFVKEILKL
>Mature_254_residues
MLNPSFFVYPYSPFFDFVGCFLLENFQLPLPIHQLDDETLDNFYPDNNLLLLNSLRKNFTCLTQQFFYIWGEQSSGKSHL
LKGITHHFFLLQRPAIYVPLEKSQYFSPAVLENLEQQQLVCLDNLQAIIGNTEWELAIFDLFNRIKSVENTLLVISANQS
PTALPVSLPDLASRLRWGESYQLVPLNDQQKIHVLQKNAHQRGIELPDEVANFLLKRLERDMKTLFEALSKLDKASLQAQ
RKLTIPFVKEILKL

Specific function: Unknown

COG id: COG0593

COG function: function code L; ATPase involved in DNA replication initiation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dnaA family. HdA subfamily [H]

Homologues:

Organism=Escherichia coli, GI226510964, Length=228, Percent_Identity=48.2456140350877, Blast_Score=222, Evalue=2e-59,
Organism=Escherichia coli, GI2367267, Length=199, Percent_Identity=23.6180904522613, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020591
- InterPro:   IPR017788
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 29453; Mature: 29453

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPSFFVYPYSPFFDFVGCFLLENFQLPLPIHQLDDETLDNFYPDNNLLLLNSLRKNFT
CCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHCCCCCEEEHHHHHHHHH
CLTQQFFYIWGEQSSGKSHLLKGITHHFFLLQRPAIYVPLEKSQYFSPAVLENLEQQQLV
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCHHHHHH
CLDNLQAIIGNTEWELAIFDLFNRIKSVENTLLVISANQSPTALPVSLPDLASRLRWGES
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEECEECHHHHHHHCCCCC
YQLVPLNDQQKIHVLQKNAHQRGIELPDEVANFLLKRLERDMKTLFEALSKLDKASLQAQ
EEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKLTIPFVKEILKL
HCCCCHHHHHHHCC
>Mature Secondary Structure
MLNPSFFVYPYSPFFDFVGCFLLENFQLPLPIHQLDDETLDNFYPDNNLLLLNSLRKNFT
CCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHCCCCCEEEHHHHHHHHH
CLTQQFFYIWGEQSSGKSHLLKGITHHFFLLQRPAIYVPLEKSQYFSPAVLENLEQQQLV
HHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCHHHHHH
CLDNLQAIIGNTEWELAIFDLFNRIKSVENTLLVISANQSPTALPVSLPDLASRLRWGES
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEECEECHHHHHHHCCCCC
YQLVPLNDQQKIHVLQKNAHQRGIELPDEVANFLLKRLERDMKTLFEALSKLDKASLQAQ
EEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKLTIPFVKEILKL
HCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]