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The map label for this gene is ccmH_1 [H]

Identifier: 15601877

GI number: 15601877

Start: 10905

End: 11369

Strand: Direct

Name: ccmH_1 [H]

Synonym: PM0012

Alternate gene names: 15601877

Gene position: 10905-11369 (Clockwise)

Preceding gene: 15601876

Following gene: 15601878

Centisome position: 0.48

GC content: 41.29

Gene sequence:

>465_bases
ATGAAAAAATTGACCGCACTTTTTTTGTTATGTTTGAGTTTCTCGAGCCTTGCTGCGATTGAAGGAGTGCAGTTTTCTTC
CACGCAACAAGAAAAAGATTATCATGCGTTGACACAAGAATTACGTTGCCCACAATGTCAAAACAATAATATTGCCGATT
CGAATGCGACGATTGCAGTCGATATGCGGCATAAAGTCTTGGAATTGTTACAAGAAGGCAAATCGAAACAAGATGTTGTC
AATTTTATGGTTGAACGCTATGGGCATTTTGTGACTTATGATCCCCCGTTAACCGTTGCCACGGTCTCACTTTGGGTCAT
TCCCGCGTTATTCGTTATCTTAGGTTTTCGGCTTTTATTTCGTCGCCATACTAAGCAAGTCGTGACCGCGCAGGCGAGTG
AACCTCGTTTGAGTGATGAACAAAAACAGCGTTTACAACGTTTATTACAAGAGAAGAAAGAATGA

Upstream 100 bases:

>100_bases
GACAAGGTATCATTCATTATCGTCATGCGGGGGATTTAAATCAGAAAGTGTGGGATGAGAAAATCCAGCCGATTTATCAA
AAATTGGTGGAGAGAAAATA

Downstream 100 bases:

>100_bases
GTTTTTGGTTAAGTGTGATGTTATTCACGTTATTTATCGCCTTCATTTGTTTTTATCCGTTACTTAAATCCAGTACGAAC
TCGTCTTTAACAAGACAGAC

Product: CcmH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKKLTALFLLCLSFSSLAAIEGVQFSSTQQEKDYHALTQELRCPQCQNNNIADSNATIAVDMRHKVLELLQEGKSKQDVV
NFMVERYGHFVTYDPPLTVATVSLWVIPALFVILGFRLLFRRHTKQVVTAQASEPRLSDEQKQRLQRLLQEKKE

Sequences:

>Translated_154_residues
MKKLTALFLLCLSFSSLAAIEGVQFSSTQQEKDYHALTQELRCPQCQNNNIADSNATIAVDMRHKVLELLQEGKSKQDVV
NFMVERYGHFVTYDPPLTVATVSLWVIPALFVILGFRLLFRRHTKQVVTAQASEPRLSDEQKQRLQRLLQEKKE
>Mature_154_residues
MKKLTALFLLCLSFSSLAAIEGVQFSSTQQEKDYHALTQELRCPQCQNNNIADSNATIAVDMRHKVLELLQEGKSKQDVV
NFMVERYGHFVTYDPPLTVATVSLWVIPALFVILGFRLLFRRHTKQVVTAQASEPRLSDEQKQRLQRLLQEKKE

Specific function: May be required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=120, Percent_Identity=53.3333333333333, Blast_Score=147, Evalue=4e-37,
Organism=Escherichia coli, GI1790512, Length=88, Percent_Identity=44.3181818181818, Blast_Score=88, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616
- InterPro:   IPR017560
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 17664; Mature: 17664

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTALFLLCLSFSSLAAIEGVQFSSTQQEKDYHALTQELRCPQCQNNNIADSNATIAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
DMRHKVLELLQEGKSKQDVVNFMVERYGHFVTYDPPLTVATVSLWVIPALFVILGFRLLF
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RRHTKQVVTAQASEPRLSDEQKQRLQRLLQEKKE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLTALFLLCLSFSSLAAIEGVQFSSTQQEKDYHALTQELRCPQCQNNNIADSNATIAV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE
DMRHKVLELLQEGKSKQDVVNFMVERYGHFVTYDPPLTVATVSLWVIPALFVILGFRLLF
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RRHTKQVVTAQASEPRLSDEQKQRLQRLLQEKKE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]