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The map label for this gene is ccmC [H]

Identifier: 15601872

GI number: 15601872

Start: 6914

End: 7654

Strand: Direct

Name: ccmC [H]

Synonym: PM0007

Alternate gene names: 15601872

Gene position: 6914-7654 (Clockwise)

Preceding gene: 15601871

Following gene: 15601873

Centisome position: 0.31

GC content: 43.86

Gene sequence:

>741_bases
ATGTGGAAATGGTTACATCCTTATGCAAAATCAGAAACACAGTATCACTTGTGCGGTAAATTTTTACCCTTAACGGCGTT
ACTGAGCGCACTTTTATTAGGCGTGGGCGTCGTGTGGGGACTGGCATTTGCCCCAGCAGATTATCAACAAGGCAATAGTT
TTCGGATCATGTATGTGCATGTACCCACCGCAATTTGGTCGATGGGTGTGTATGGTTCGATGGCGATTGCGGCTTTTATT
GCGTTAGTGTGGCAAATCAAACAGGCGCACTTAGCCATGATAGCGATGGCACCGATTGGTGCATTGTTTACTTTTTTAGC
TTTGGTTACTGGTGCTGTGTGGGGTAAACCAATGTGGGGCACTTGGTGGGTATGGGATGCCCGTTTGACCTCAGAATTGA
TTTTATTTTTCCTGTATTTAGGGGTGATGGCACTTTATTCAGCCTTTCAAGATCGTGCTATTGGCGCAAAAGCAGCAGGT
GTTCTGTGTTTAGTGGGGGTGATTAATTTACCGATCATTCATTTTTCAGTAGAGTGGTGGAATACCCTACATCAAGGAGC
GAGCATTACGAAATTTGAGAAGCCTTCAATTGCGACCCCCATGTTAATTCCACTGATTCTCTGTATTTTTGGTTTTATGA
TGTTATACATTTGGTTGACGCTAATCCGCTATCGTAGTGCGCTGCTGAAAGAAGACTATAAGCGTCCTTGGGTACAAGAA
TTAGCCACAAAACTCAAATAG

Upstream 100 bases:

>100_bases
AGCCATTTTAGGCGCTATTTTAGCCGGCTCTGTAACATTATCGCCGTTTGCTATTGCGGCTGCATTACGAATTAGCTTAG
ATCAATAAAAGGAAGGCATT

Downstream 100 bases:

>100_bases
GCTGGGGGAGAGATAATATGTTTTTTGCAACTTGGCAGGATTTTTTCAATATGGGTGGCTACGGTTTTTATGTGTGGCTA
GCCTATGGCATCAGCTTGTT

Product: CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MWKWLHPYAKSETQYHLCGKFLPLTALLSALLLGVGVVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAFI
ALVWQIKQAHLAMIAMAPIGALFTFLALVTGAVWGKPMWGTWWVWDARLTSELILFFLYLGVMALYSAFQDRAIGAKAAG
VLCLVGVINLPIIHFSVEWWNTLHQGASITKFEKPSIATPMLIPLILCIFGFMMLYIWLTLIRYRSALLKEDYKRPWVQE
LATKLK

Sequences:

>Translated_246_residues
MWKWLHPYAKSETQYHLCGKFLPLTALLSALLLGVGVVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAFI
ALVWQIKQAHLAMIAMAPIGALFTFLALVTGAVWGKPMWGTWWVWDARLTSELILFFLYLGVMALYSAFQDRAIGAKAAG
VLCLVGVINLPIIHFSVEWWNTLHQGASITKFEKPSIATPMLIPLILCIFGFMMLYIWLTLIRYRSALLKEDYKRPWVQE
LATKLK
>Mature_246_residues
MWKWLHPYAKSETQYHLCGKFLPLTALLSALLLGVGVVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGVYGSMAIAAFI
ALVWQIKQAHLAMIAMAPIGALFTFLALVTGAVWGKPMWGTWWVWDARLTSELILFFLYLGVMALYSAFQDRAIGAKAAG
VLCLVGVINLPIIHFSVEWWNTLHQGASITKFEKPSIATPMLIPLILCIFGFMMLYIWLTLIRYRSALLKEDYKRPWVQE
LATKLK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=244, Percent_Identity=62.2950819672131, Blast_Score=307, Evalue=5e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27791; Mature: 27791

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKWLHPYAKSETQYHLCGKFLPLTALLSALLLGVGVVWGLAFAPADYQQGNSFRIMYVH
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
VPTAIWSMGVYGSMAIAAFIALVWQIKQAHLAMIAMAPIGALFTFLALVTGAVWGKPMWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TWWVWDARLTSELILFFLYLGVMALYSAFQDRAIGAKAAGVLCLVGVINLPIIHFSVEWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHHH
NTLHQGASITKFEKPSIATPMLIPLILCIFGFMMLYIWLTLIRYRSALLKEDYKRPWVQE
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LATKLK
HHHHCC
>Mature Secondary Structure
MWKWLHPYAKSETQYHLCGKFLPLTALLSALLLGVGVVWGLAFAPADYQQGNSFRIMYVH
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
VPTAIWSMGVYGSMAIAAFIALVWQIKQAHLAMIAMAPIGALFTFLALVTGAVWGKPMWG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
TWWVWDARLTSELILFFLYLGVMALYSAFQDRAIGAKAAGVLCLVGVINLPIIHFSVEWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEHHHH
NTLHQGASITKFEKPSIATPMLIPLILCIFGFMMLYIWLTLIRYRSALLKEDYKRPWVQE
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LATKLK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]