| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835532
GI number: 15835532
Start: 1070047
End: 1070730
Strand: Reverse
Name: Not Available
Synonym: TC0919
Alternate gene names: 15835532
Gene position: 1070730-1070047 (Counterclockwise)
Preceding gene: 15835534
Following gene: 15835531
Centisome position: 99.79
GC content: 35.09
Gene sequence:
>684_bases ATGGCAGGTCCTAAACATGTGCTACTAGTAAGTGAAAATTGGGACTTATTTTTCCAAACAAAAAAATTACTTAATCCTGA AGAATATCGGTGTACGATTGGTCAGCAGTACAAACAAGAAGTATCAGCAGACCTAATTGTTTGTGAATATGAATTACTTC CCAAAGATATTCATGCTCCTAAGTATTTTGAAGCTAACTTTGTTATAGTTTTATTAGATGTTTTTGATGAAGAGAAGTGT ATCGATCTTTTAGATAGAGGATTTTGGTTTTTGGTGCAGCCAATTACTCCTAGACTTCTAAAAGCTGCTATAGGTGCGTT TCTTTCTCAAGGTTCTTTGCATTCTGTTCCTGAAAGTATTCAGTTTGGCCCTAATGTGTTTCATATTTTGAAACTGATAG TGGAAACTCCAGAAGGAACTATTCATTTAACTCCATCCGAATCCGGTATTTTGAAAAGACTGTTGCTGAACCAAGGGCAA CTTTGTTTACGTAAACATCTTCTAGAGGAAATCAAAAATCATTCTAAAGAGATTGTAGCTAGAAATGTGGATGTACATAT AGCTTCTTTAAGAAAGAAATTAGGCGCTTATGGAAATAGAATCGTCACTGTACGTGGAGTGGGGTATCTATTTTCCGATG ACGAAGAGAAAAATTCTTCGCAAGAAGATACAAAGCTTTCTTAA
Upstream 100 bases:
>100_bases ATGAAAAAAAGTCTGAAGATATCGTTTTTTTTTCTAAAGCTCTTTGAAAAAACTATTTTTATTGTATTAGGTGAGCTAAT AATTAAATGGGTTTGTTTAT
Downstream 100 bases:
>100_bases AACAACTAGGGGTGTTTAAATACCAGACTATGCTGTATCAGGAGCTTAGTATGGTTTTAGCTTCCTCTTTATTTTCCCCT GAAGAATTTCTTTATCCAGA
Product: transcriptional regulator
Products: NA
Alternate protein names: Two Component Transcriptional Regulator; Pho Two-Component System Sensor Histidine Kinase; Two-Component Response Regulator PhoB; HTH Transcriptional Regulatory Protein And Receiver Domain; Two-Component System Regulator LlrA; Transcriptional Regulatory Protein ResD; Trans-Activating Transcription Regulator; Two-Component Response Regulator PhoP
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAPKYFEANFVIVLLDVFDEEKC IDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQ LCLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS
Sequences:
>Translated_227_residues MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAPKYFEANFVIVLLDVFDEEKC IDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQ LCLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS >Mature_226_residues AGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAPKYFEANFVIVLLDVFDEEKCI DLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQL CLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS
Specific function: Member Of The Two-Component Regulatory System Bass/Basr. Polymyxin Resistance May Be Mediated By An Interaction Between Basr (Pmra) Or A Basr-Regulated Gene Product And Pmrd (By Similarity). [C]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25810; Mature: 25679
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAP CCCCCEEEEEECCCCEEEEHHHHCCCCHHEEHHHHHHHHHHCCCEEEEEEECCCCCCCCC KYFEANFVIVLLDVFDEEKCIDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESI CEECCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHH QFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQLCLRKHLLEEIKNHSKEIVA CCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS HCCCHHHHHHHHHHCCCCCEEEEEEECEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure AGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAP CCCCEEEEEECCCCEEEEHHHHCCCCHHEEHHHHHHHHHHCCCEEEEEEECCCCCCCCC KYFEANFVIVLLDVFDEEKCIDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESI CEECCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHH QFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQLCLRKHLLEEIKNHSKEIVA CCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH RNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS HCCCHHHHHHHHHHCCCCCEEEEEEECEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA