Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835532

GI number: 15835532

Start: 1070047

End: 1070730

Strand: Reverse

Name: Not Available

Synonym: TC0919

Alternate gene names: 15835532

Gene position: 1070730-1070047 (Counterclockwise)

Preceding gene: 15835534

Following gene: 15835531

Centisome position: 99.79

GC content: 35.09

Gene sequence:

>684_bases
ATGGCAGGTCCTAAACATGTGCTACTAGTAAGTGAAAATTGGGACTTATTTTTCCAAACAAAAAAATTACTTAATCCTGA
AGAATATCGGTGTACGATTGGTCAGCAGTACAAACAAGAAGTATCAGCAGACCTAATTGTTTGTGAATATGAATTACTTC
CCAAAGATATTCATGCTCCTAAGTATTTTGAAGCTAACTTTGTTATAGTTTTATTAGATGTTTTTGATGAAGAGAAGTGT
ATCGATCTTTTAGATAGAGGATTTTGGTTTTTGGTGCAGCCAATTACTCCTAGACTTCTAAAAGCTGCTATAGGTGCGTT
TCTTTCTCAAGGTTCTTTGCATTCTGTTCCTGAAAGTATTCAGTTTGGCCCTAATGTGTTTCATATTTTGAAACTGATAG
TGGAAACTCCAGAAGGAACTATTCATTTAACTCCATCCGAATCCGGTATTTTGAAAAGACTGTTGCTGAACCAAGGGCAA
CTTTGTTTACGTAAACATCTTCTAGAGGAAATCAAAAATCATTCTAAAGAGATTGTAGCTAGAAATGTGGATGTACATAT
AGCTTCTTTAAGAAAGAAATTAGGCGCTTATGGAAATAGAATCGTCACTGTACGTGGAGTGGGGTATCTATTTTCCGATG
ACGAAGAGAAAAATTCTTCGCAAGAAGATACAAAGCTTTCTTAA

Upstream 100 bases:

>100_bases
ATGAAAAAAAGTCTGAAGATATCGTTTTTTTTTCTAAAGCTCTTTGAAAAAACTATTTTTATTGTATTAGGTGAGCTAAT
AATTAAATGGGTTTGTTTAT

Downstream 100 bases:

>100_bases
AACAACTAGGGGTGTTTAAATACCAGACTATGCTGTATCAGGAGCTTAGTATGGTTTTAGCTTCCTCTTTATTTTCCCCT
GAAGAATTTCTTTATCCAGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Two Component Transcriptional Regulator; Pho Two-Component System Sensor Histidine Kinase; Two-Component Response Regulator PhoB; HTH Transcriptional Regulatory Protein And Receiver Domain; Two-Component System Regulator LlrA; Transcriptional Regulatory Protein ResD; Trans-Activating Transcription Regulator; Two-Component Response Regulator PhoP

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAPKYFEANFVIVLLDVFDEEKC
IDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQ
LCLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS

Sequences:

>Translated_227_residues
MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAPKYFEANFVIVLLDVFDEEKC
IDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQ
LCLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS
>Mature_226_residues
AGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAPKYFEANFVIVLLDVFDEEKCI
DLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESIQFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQL
CLRKHLLEEIKNHSKEIVARNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS

Specific function: Member Of The Two-Component Regulatory System Bass/Basr. Polymyxin Resistance May Be Mediated By An Interaction Between Basr (Pmra) Or A Basr-Regulated Gene Product And Pmrd (By Similarity). [C]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25810; Mature: 25679

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAP
CCCCCEEEEEECCCCEEEEHHHHCCCCHHEEHHHHHHHHHHCCCEEEEEEECCCCCCCCC
KYFEANFVIVLLDVFDEEKCIDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESI
CEECCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHH
QFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQLCLRKHLLEEIKNHSKEIVA
CCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS
HCCCHHHHHHHHHHCCCCCEEEEEEECEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGPKHVLLVSENWDLFFQTKKLLNPEEYRCTIGQQYKQEVSADLIVCEYELLPKDIHAP
CCCCEEEEEECCCCEEEEHHHHCCCCHHEEHHHHHHHHHHCCCEEEEEEECCCCCCCCC
KYFEANFVIVLLDVFDEEKCIDLLDRGFWFLVQPITPRLLKAAIGAFLSQGSLHSVPESI
CEECCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHH
QFGPNVFHILKLIVETPEGTIHLTPSESGILKRLLLNQGQLCLRKHLLEEIKNHSKEIVA
CCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
RNVDVHIASLRKKLGAYGNRIVTVRGVGYLFSDDEEKNSSQEDTKLS
HCCCHHHHHHHHHHCCCCCEEEEEEECEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA