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Identifier: 15835530

GI number: 15835530

Start: 1068445

End: 1069323

Strand: Reverse

Name: Not Available

Synonym: TC0917

Alternate gene names: 15835530

Gene position: 1069323-1068445 (Counterclockwise)

Preceding gene: 15835531

Following gene: 15835528

Centisome position: 99.66

GC content: 38.45

Gene sequence:

>879_bases
ATGGATGATTTCAATGTTTATCGATCGAAAATAGAAAAAAGGCTCCGCGATTCTTTAGAGGATTTTGGAAAAACTCAAAG
CGGATTACGTAACCCAATAGAGTATGCTCTACTGGGTGGAGGAAAACGTGTGCGTCCTCTACTCGTATGTTTGTTTGCCG
ACAGCATTCAAAAAAGACGAGACGTTTTGGATACTGCAATTGCCGTGGAGTATATCCACACATCAACCTTGATAGCGGAC
GATCTTCCTTGTATGGATAATGATGACATGCGTAGGGGGAAACCTTCTGTTCACAAAGCTTTTGATGAGGCTTCTGCTCT
TCTTGCTTCGTATGCTCTTATTCCCGCAGCTTATGCAAGAATTCGTAAGAATGCGAAAGCTTTGAAGGAAGTGGTTTCGG
TTCAACGAGAAATCGAAGATGCTTACGAAGATGTTTTGGATCTAATCGAACTACGATTTGGGGTAGAAGGGGTTTTGGGT
GGTCAGTATGAAGATGTTTTTTTCCAAAGTTTCACTGAAGAGAGTGTTATAAATATTATTAATAAGAAAACTAGCGCTCT
TTTTGAAATAGCATGTGTATCTGGATGGTTATTTGGAGGTGGAGCAAGAGAAAAAACTCCTTTAGTTATCGAGTTTGCCA
GGAATTTTGGTATTTTGTTTCAAATAGGAGATGATCTAGCAGATCTTAGTCAGGATAACCAAGAAGAGAAGCATATGAAT
TATGCGCTATTATTTGGAGAGCAAGCTGCTAAAGACTTGCTTAACAGATCTTTTAATTCGTGTATTGAAATTCTTCATTT
ACTCAAAGAAAAAGGGGTAAAGCCTTTGGAGGAGTTATGTAAGAAGGTTTTTATGGGTGGAAATAAACATTCTTTATGA

Upstream 100 bases:

>100_bases
GTGGTTAGTGCTACAAAGATTCTTCCTAATCAAACTATTTATTAGGAGTAAATCTTTGTTGAGAGGACTTTGATGAGAAA
AAGTAGGCGGTTGCTCAAAT

Downstream 100 bases:

>100_bases
TGGGTTAGCCTTCGAAGGCTTTGGAAAAGGCGCCCACGTACTGTGGGCGCCTTTTTTTATGCAGGTTGGTTGTCTTTTTC
TCTCAAACAACAACGAGTCT

Product: geranylgeranyl pyrophosphate synthase, putative

Products: NA

Alternate protein names: FPP synthase; (2E,6E)-farnesyl diphosphate synthase; Geranyltranstransferase [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDDFNVYRSKIEKRLRDSLEDFGKTQSGLRNPIEYALLGGGKRVRPLLVCLFADSIQKRRDVLDTAIAVEYIHTSTLIAD
DLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLG
GQYEDVFFQSFTEESVINIINKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQDNQEEKHMN
YALLFGEQAAKDLLNRSFNSCIEILHLLKEKGVKPLEELCKKVFMGGNKHSL

Sequences:

>Translated_292_residues
MDDFNVYRSKIEKRLRDSLEDFGKTQSGLRNPIEYALLGGGKRVRPLLVCLFADSIQKRRDVLDTAIAVEYIHTSTLIAD
DLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLG
GQYEDVFFQSFTEESVINIINKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQDNQEEKHMN
YALLFGEQAAKDLLNRSFNSCIEILHLLKEKGVKPLEELCKKVFMGGNKHSL
>Mature_292_residues
MDDFNVYRSKIEKRLRDSLEDFGKTQSGLRNPIEYALLGGGKRVRPLLVCLFADSIQKRRDVLDTAIAVEYIHTSTLIAD
DLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYARIRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLG
GQYEDVFFQSFTEESVINIINKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQDNQEEKHMN
YALLFGEQAAKDLLNRSFNSCIEILHLLKEKGVKPLEELCKKVFMGGNKHSL

Specific function: Supplies Octaprenyl Diphosphate, The Precursor For The Side Chain Of The Isoprenoid Quinones Ubiquinone And Menaquinone. [C]

COG id: COG0142

COG function: function code H; Geranylgeranyl pyrophosphate synthase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FPP/GGPP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1789578, Length=264, Percent_Identity=26.8939393939394, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786623, Length=251, Percent_Identity=33.8645418326693, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000092
- InterPro:   IPR017446
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00348 polyprenyl_synt [H]

EC number: =2.5.1.10 [H]

Molecular weight: Translated: 32832; Mature: 32832

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00723 POLYPRENYL_SYNTHET_1 ; PS00444 POLYPRENYL_SYNTHET_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDFNVYRSKIEKRLRDSLEDFGKTQSGLRNPIEYALLGGGKRVRPLLVCLFADSIQKRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DVLDTAIAVEYIHTSTLIADDLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYAR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLGGQYEDVFFQSFTEESVINII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHH
NKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQDNQEEKHMN
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHCCCEEEEECCHHHHHHCCCCHHHHHH
YALLFGEQAAKDLLNRSFNSCIEILHLLKEKGVKPLEELCKKVFMGGNKHSL
HHHEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDDFNVYRSKIEKRLRDSLEDFGKTQSGLRNPIEYALLGGGKRVRPLLVCLFADSIQKRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DVLDTAIAVEYIHTSTLIADDLPCMDNDDMRRGKPSVHKAFDEASALLASYALIPAAYAR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IRKNAKALKEVVSVQREIEDAYEDVLDLIELRFGVEGVLGGQYEDVFFQSFTEESVINII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHH
NKKTSALFEIACVSGWLFGGGAREKTPLVIEFARNFGILFQIGDDLADLSQDNQEEKHMN
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEHHHCCCEEEEECCHHHHHHCCCCHHHHHH
YALLFGEQAAKDLLNRSFNSCIEILHLLKEKGVKPLEELCKKVFMGGNKHSL
HHHEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9515931 [H]