| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835529
GI number: 15835529
Start: 1067402
End: 1068388
Strand: Direct
Name: Not Available
Synonym: TC0916
Alternate gene names: 15835529
Gene position: 1067402-1068388 (Clockwise)
Preceding gene: 15835527
Following gene: 15835533
Centisome position: 99.48
GC content: 41.74
Gene sequence:
>987_bases ATGGAAAAGAATTATTATGCTTTAGCGTATTATTACTTTGGTCCCGTAAGCAACCCTCATGAAGAAATTGCTTTACACAA GCAATTATTCAAAACCATGGATGTTTCTTGCCGGATTTATATCTCTGAGGAAGGGATTAACGGCCAGTTTAGTGGTTATC AACCGGATGCAGAGCGCTATATGGCGTGGCTGAAACAGCGCCCAGACTTCGCTACTGTAAAATTCAAAATTCATCATATT AAAGAAAATGTGTTCCCACGAGTTACGGTGAAATATCGTAAAGAGCTTGTTGCCCTAGGATGCTCTGTTGATACAAGCAA GCAAGGAAAACACATTTCTCCTGAAGAGTGGCATGAAAAACTTCAAGAGAATCGTTGCTTAGTTTTGGATGTTCGAAATA ATTATGAATGGAAAATCGGTCACTTTGAGAATGCGGTTCTCCCTGACATAGAGACTTTCCGGGAGTTTCCAGCTTATGCA GATCGGCTCGCTCAAGAGCATGCCCCCGAAACTACTCCAGTAATGATGTATTGCACGGGAGGAATTCGTTGTGAACTCTA CTCAGCTCTTCTTTTAGAAAAAGGCTTCAAAGAAGTTTATCAACTCGATGGTGGCGTCATTGCTTATGGGTTGAAGATGG GCACTGGAAAATGGAAAGGGAAGTTATTCGTATTCGATGATCGCATGGCGGTGCCTATCAACGAAGCGGATCCTAACGTC TCCCCTATTTCAAAGTGTTCTCTCTGTGATATAGAGTCTGATACGTACTATAATTGTGCAAATACAGATTGCAATAATCT CTTCCTTTGCTGTGAATCTTGTATCACTTCTCAGAAGGGATGTTGCTCGGAAGAATGTTCTCAAGCACCTCGTATTCGAA CATTTTCTGCAGAAAGAGGAAACAAACCTTTCCGAAGAAAACACCTCTGCCCAACAATCGAGCAGACTCGTTGTTGTTTG AGAGAAAAAGACAACCAACCTGCATAA
Upstream 100 bases:
>100_bases GTATACTTTCTTTCAGCTTGCTAAAAAACTTTTTAAATAAACTTTCAAGCTTCTTGATTTTAATCGTAGGACAAGTTTTC AGCATATATAGGATATCTTC
Downstream 100 bases:
>100_bases AAAAAGGCGCCCACAGTACGTGGGCGCCTTTTCCAAAGCCTTCGAAGGCTAACCCATCATAAAGAATGTTTATTTCCACC CATAAAAACCTTCTTACATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MEKNYYALAYYYFGPVSNPHEEIALHKQLFKTMDVSCRIYISEEGINGQFSGYQPDAERYMAWLKQRPDFATVKFKIHHI KENVFPRVTVKYRKELVALGCSVDTSKQGKHISPEEWHEKLQENRCLVLDVRNNYEWKIGHFENAVLPDIETFREFPAYA DRLAQEHAPETTPVMMYCTGGIRCELYSALLLEKGFKEVYQLDGGVIAYGLKMGTGKWKGKLFVFDDRMAVPINEADPNV SPISKCSLCDIESDTYYNCANTDCNNLFLCCESCITSQKGCCSEECSQAPRIRTFSAERGNKPFRRKHLCPTIEQTRCCL REKDNQPA
Sequences:
>Translated_328_residues MEKNYYALAYYYFGPVSNPHEEIALHKQLFKTMDVSCRIYISEEGINGQFSGYQPDAERYMAWLKQRPDFATVKFKIHHI KENVFPRVTVKYRKELVALGCSVDTSKQGKHISPEEWHEKLQENRCLVLDVRNNYEWKIGHFENAVLPDIETFREFPAYA DRLAQEHAPETTPVMMYCTGGIRCELYSALLLEKGFKEVYQLDGGVIAYGLKMGTGKWKGKLFVFDDRMAVPINEADPNV SPISKCSLCDIESDTYYNCANTDCNNLFLCCESCITSQKGCCSEECSQAPRIRTFSAERGNKPFRRKHLCPTIEQTRCCL REKDNQPA >Mature_328_residues MEKNYYALAYYYFGPVSNPHEEIALHKQLFKTMDVSCRIYISEEGINGQFSGYQPDAERYMAWLKQRPDFATVKFKIHHI KENVFPRVTVKYRKELVALGCSVDTSKQGKHISPEEWHEKLQENRCLVLDVRNNYEWKIGHFENAVLPDIETFREFPAYA DRLAQEHAPETTPVMMYCTGGIRCELYSALLLEKGFKEVYQLDGGVIAYGLKMGTGKWKGKLFVFDDRMAVPINEADPNV SPISKCSLCDIESDTYYNCANTDCNNLFLCCESCITSQKGCCSEECSQAPRIRTFSAERGNKPFRRKHLCPTIEQTRCCL REKDNQPA
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=285, Percent_Identity=34.7368421052632, Blast_Score=153, Evalue=2e-37, Organism=Escherichia coli, GI1787294, Length=315, Percent_Identity=33.6507936507937, Blast_Score=160, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y916_CHLMU (Q9PJB6)
Other databases:
- EMBL: AE002160 - PIR: D81650 - RefSeq: NP_297288.1 - ProteinModelPortal: Q9PJB6 - GeneID: 1246285 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0916 - TIGR: TC_0916 - HOGENOM: HBG366219 - OMA: TTPVMMY - PhylomeDB: Q9PJB6 - ProtClustDB: PRK00142 - BioCyc: CMUR243161:TC_0916-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 37783; Mature: 37783
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNYYALAYYYFGPVSNPHEEIALHKQLFKTMDVSCRIYISEEGINGQFSGYQPDAERY CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHH MAWLKQRPDFATVKFKIHHIKENVFPRVTVKYRKELVALGCSVDTSKQGKHISPEEWHEK HHHHHCCCCEEEEEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH LQENRCLVLDVRNNYEWKIGHFENAVLPDIETFREFPAYADRLAQEHAPETTPVMMYCTG HHCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GIRCELYSALLLEKGFKEVYQLDGGVIAYGLKMGTGKWKGKLFVFDDRMAVPINEADPNV CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCEEEECCCCCCCC SPISKCSLCDIESDTYYNCANTDCNNLFLCCESCITSQKGCCSEECSQAPRIRTFSAERG CCCCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCC NKPFRRKHLCPTIEQTRCCLREKDNQPA CCCHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MEKNYYALAYYYFGPVSNPHEEIALHKQLFKTMDVSCRIYISEEGINGQFSGYQPDAERY CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHH MAWLKQRPDFATVKFKIHHIKENVFPRVTVKYRKELVALGCSVDTSKQGKHISPEEWHEK HHHHHCCCCEEEEEEEEEEHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH LQENRCLVLDVRNNYEWKIGHFENAVLPDIETFREFPAYADRLAQEHAPETTPVMMYCTG HHCCCEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC GIRCELYSALLLEKGFKEVYQLDGGVIAYGLKMGTGKWKGKLFVFDDRMAVPINEADPNV CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCEEEECCCCCCCC SPISKCSLCDIESDTYYNCANTDCNNLFLCCESCITSQKGCCSEECSQAPRIRTFSAERG CCCCCCEEECCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCC NKPFRRKHLCPTIEQTRCCLREKDNQPA CCCHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10684935