| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835523
GI number: 15835523
Start: 1052128
End: 1054755
Strand: Reverse
Name: Not Available
Synonym: TC0909
Alternate gene names: NA
Gene position: 1054755-1052128 (Counterclockwise)
Preceding gene: 15835525
Following gene: 15835520
Centisome position: 98.3
GC content: 39.12
Gene sequence:
>2628_bases ATGTCTTCTTACTATTTAAATTTCCGTCCCAATACTGTATCTGGAGAAGGTTTATTTAAAATCAAACTGACAAATCCTTG TTCAGATTTTAAAAACCGAGCAAAACCAGCTATTGATATTGAGGAGTTGAACTCTGGACTTTATATACTTAGACGATTGT CTGTAGCTTTAGAAGCCGGGTATCTTGGTGTTGGTTCTGTCATTAACCCAGATAATAAAATTTTCCCTGGTGGAGAGGGG ATTGTAAGAAGATTTCAGGAAGGCAGTGTTCTTTCTTCTAGAACGATTTCTGGTAACACGGTTGCCGATATTAAACAAAG TACAGCTAAGACGTTAGTCACTACAATTTCAGATGGGTTGAATACTTTGATAGAGGATATCCCTGAGCTTCCTATGACTC AGGTAGGGAGTATATCGGCAGCTCTCATTTTAATGGAGACTTATAAATCAAAACCTTCTCTGAATGAGACAGAGCAAACT ACGGTTTTTGGTAATGCGTATGTTCCTTCTGATGAATCCATTAAAGCCATCATCAAAAAAGAAATGGAACAAGAAATCCA AGAGAAGAAAGATCTTATTATCACCGCACAGTTAACGGCACAAGGAGCTTCCGATCAAGCGATTGAAGAGTCGTTGAGGG ATTATGAGGAATTCTATGTTTCTGAGTATTTTAATACACATGTGAAAGAAGATCTCTGGAAATATCGTGCAACTATTGGG GCAAATATTCAGGAGATGTTAGAAAAATGTTCGGCATTGGGTCCGGATATTCCAACATCTTTAACAAAAGATAATGTCAA AGAAGCTAATGCTAAGTCGGTACTGAAGGCATGGATGGAAGCCTTCAGCAATGTTTTGGAGGTCGAACCGGCCTTGGGGG GATCTCAAGAGATCATTGAAGCTGTGCTTAAAATGATCCCTTATGCAACAAAAACCACTTTAACCGACGAGGATATTCAT AAGATTTATGAGCAAGCCGCTTTGCCCTCTCCAGAGGTGATGGATTATTATCTAACCAAGCAAGAGGCCGGGATCTGTAA AGGAGCGGTTGTTAAGGCGTTTCAGCAAGCTACGCAGAACCTACAAGCTGTGCGTGCTGATGTAAAGGAGAACATTGAAG AGTTAGAAATCAAAAAAACATCTTTCCAACAAGCACAGGCATCTTTAGAAAGTATGTTGGAAGGGGTTAAGCGTTTAAAT GATAACAAAGCGTTTACGTCTGTAAGATTAGCATCTGTAATGGAGTGCTACTCTGGGCTTATGGCATTGTCGCAAATGTC TAATGTTTTAGAAACAAATGGAAAAACACTCATCACGGAATATGTAAATCGATTTTTACAGTTGAACAATACAAACACAG CACAAACTTTAGCACATGTAATATCTTACATGGCAGCGTATTGTGAGGTGGCTGAATGTACAATGGCGACTACGTTTTTA AATCAAACCGAGGTCATTCCATATGTAAACAACAAATTCCAAGAGCTTCAGCAACAGCCATTTTGTGCTACTTTGGCTTC TCCAGGCGTGGCGGAATTAATGAAGAATTATATCGATTTCACGAATGGAATTTGCAAAGCGAATTTCAGCAATTTCGTAG ATAATGTGATTACGAAAGATTTAGATCTTTCTGCAGCAGCTAATCAGGCTCAGGCTATGCTTGGGGAGTTTCAGAAAAAA GCCGAAGAGTATCTCAACACATTTCAAACCGAGATAGATAATCTCAATAAAGTGTATAACGAGTTGGATCCGGCAAAGGC AACATTCAATGTTGGTATTGGAAATCAAGAGACTTTGCATGAGAAAGCTGTAAATAATTGGATCGAGTCTACAAGTTTAG GGTCTGCTTTTATCCATCTTGTTTTGAATACACAGATTCCTAAACAGGAAAATTTCTTGAATCCTTTGATTCAGGAAGTG AATTTTAATAACGTAGCTGCAAACGCTGTTAATGACCTTCTGTCGATTACAAATAACTTCTCAACATCCTCTGTGTACTA TAATTTGTCCTCTTACCTTGTCGAGAGTAAAGAGGGGGTAGACTATTTTTGTGGAGGGTTCTTTGAGTTTCTTTGTGCTT TCGCTAAGGAGCGTGAGTATATCCTTAGGGACATCAATAGTTGTTATCGAGCTCAGGCTTTTGGAAACGCTTTGCTTGCA AGAATAGAGGCTATGGCTGCTGGTAATAAAGTGACTGCAGCTCAAGCGAATAACATGCGTACGCAGACAAACTTATACCT GGCTTTTATTCGGATTATTGTTGAACAGTTGTCAGTTTTAGACTCTTTGTTAAGAAGTCTAAATTATCAACCTCTGCAAA AAGATGGTAATTACGATAAAGATAAGTATGAGATTAAGGGGCCCACGGATTGGATTTCGACACTGGCTAGTTTGGAAGGT TACGTCGTTAATGGATTTGATAGCGCAAGTCCTTCAGGTGGTTTAGGGCCTATGCATACGCTAGTGCAAACAGATCAACA TGATTATTTAACACAGAGCCAGACCCAACAATTGAATTTGCAAAATCAAATGACAAATATTCAACAGGAATGGACTTTAG TTTCCACCTCCTTGCAAGTTCTCAACGGGATTTTATCTCACTTGGCTGGGGAAATTTACTCTGGCTAA
Upstream 100 bases:
>100_bases AAAAAGATTACCACAAAAATTTTTATAAAAACAAATATATATAGAAAAAAACTTTTTTTAATAAGAAAATAAAAACATAA AAGTTTTTAGTTTTGTTTTT
Downstream 100 bases:
>100_bases AAAAAGCCCGTGGAAATGATCCACGGGCCTCGATGATTAGGTATTCTGAAGTTCTTAAGAAGCTGCAATAAGGAGAACAT TTCCTAAAGCAGATAAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 875; Mature: 874
Protein sequence:
>875_residues MSSYYLNFRPNTVSGEGLFKIKLTNPCSDFKNRAKPAIDIEELNSGLYILRRLSVALEAGYLGVGSVINPDNKIFPGGEG IVRRFQEGSVLSSRTISGNTVADIKQSTAKTLVTTISDGLNTLIEDIPELPMTQVGSISAALILMETYKSKPSLNETEQT TVFGNAYVPSDESIKAIIKKEMEQEIQEKKDLIITAQLTAQGASDQAIEESLRDYEEFYVSEYFNTHVKEDLWKYRATIG ANIQEMLEKCSALGPDIPTSLTKDNVKEANAKSVLKAWMEAFSNVLEVEPALGGSQEIIEAVLKMIPYATKTTLTDEDIH KIYEQAALPSPEVMDYYLTKQEAGICKGAVVKAFQQATQNLQAVRADVKENIEELEIKKTSFQQAQASLESMLEGVKRLN DNKAFTSVRLASVMECYSGLMALSQMSNVLETNGKTLITEYVNRFLQLNNTNTAQTLAHVISYMAAYCEVAECTMATTFL NQTEVIPYVNNKFQELQQQPFCATLASPGVAELMKNYIDFTNGICKANFSNFVDNVITKDLDLSAAANQAQAMLGEFQKK AEEYLNTFQTEIDNLNKVYNELDPAKATFNVGIGNQETLHEKAVNNWIESTSLGSAFIHLVLNTQIPKQENFLNPLIQEV NFNNVAANAVNDLLSITNNFSTSSVYYNLSSYLVESKEGVDYFCGGFFEFLCAFAKEREYILRDINSCYRAQAFGNALLA RIEAMAAGNKVTAAQANNMRTQTNLYLAFIRIIVEQLSVLDSLLRSLNYQPLQKDGNYDKDKYEIKGPTDWISTLASLEG YVVNGFDSASPSGGLGPMHTLVQTDQHDYLTQSQTQQLNLQNQMTNIQQEWTLVSTSLQVLNGILSHLAGEIYSG
Sequences:
>Translated_875_residues MSSYYLNFRPNTVSGEGLFKIKLTNPCSDFKNRAKPAIDIEELNSGLYILRRLSVALEAGYLGVGSVINPDNKIFPGGEG IVRRFQEGSVLSSRTISGNTVADIKQSTAKTLVTTISDGLNTLIEDIPELPMTQVGSISAALILMETYKSKPSLNETEQT TVFGNAYVPSDESIKAIIKKEMEQEIQEKKDLIITAQLTAQGASDQAIEESLRDYEEFYVSEYFNTHVKEDLWKYRATIG ANIQEMLEKCSALGPDIPTSLTKDNVKEANAKSVLKAWMEAFSNVLEVEPALGGSQEIIEAVLKMIPYATKTTLTDEDIH KIYEQAALPSPEVMDYYLTKQEAGICKGAVVKAFQQATQNLQAVRADVKENIEELEIKKTSFQQAQASLESMLEGVKRLN DNKAFTSVRLASVMECYSGLMALSQMSNVLETNGKTLITEYVNRFLQLNNTNTAQTLAHVISYMAAYCEVAECTMATTFL NQTEVIPYVNNKFQELQQQPFCATLASPGVAELMKNYIDFTNGICKANFSNFVDNVITKDLDLSAAANQAQAMLGEFQKK AEEYLNTFQTEIDNLNKVYNELDPAKATFNVGIGNQETLHEKAVNNWIESTSLGSAFIHLVLNTQIPKQENFLNPLIQEV NFNNVAANAVNDLLSITNNFSTSSVYYNLSSYLVESKEGVDYFCGGFFEFLCAFAKEREYILRDINSCYRAQAFGNALLA RIEAMAAGNKVTAAQANNMRTQTNLYLAFIRIIVEQLSVLDSLLRSLNYQPLQKDGNYDKDKYEIKGPTDWISTLASLEG YVVNGFDSASPSGGLGPMHTLVQTDQHDYLTQSQTQQLNLQNQMTNIQQEWTLVSTSLQVLNGILSHLAGEIYSG >Mature_874_residues SSYYLNFRPNTVSGEGLFKIKLTNPCSDFKNRAKPAIDIEELNSGLYILRRLSVALEAGYLGVGSVINPDNKIFPGGEGI VRRFQEGSVLSSRTISGNTVADIKQSTAKTLVTTISDGLNTLIEDIPELPMTQVGSISAALILMETYKSKPSLNETEQTT VFGNAYVPSDESIKAIIKKEMEQEIQEKKDLIITAQLTAQGASDQAIEESLRDYEEFYVSEYFNTHVKEDLWKYRATIGA NIQEMLEKCSALGPDIPTSLTKDNVKEANAKSVLKAWMEAFSNVLEVEPALGGSQEIIEAVLKMIPYATKTTLTDEDIHK IYEQAALPSPEVMDYYLTKQEAGICKGAVVKAFQQATQNLQAVRADVKENIEELEIKKTSFQQAQASLESMLEGVKRLND NKAFTSVRLASVMECYSGLMALSQMSNVLETNGKTLITEYVNRFLQLNNTNTAQTLAHVISYMAAYCEVAECTMATTFLN QTEVIPYVNNKFQELQQQPFCATLASPGVAELMKNYIDFTNGICKANFSNFVDNVITKDLDLSAAANQAQAMLGEFQKKA EEYLNTFQTEIDNLNKVYNELDPAKATFNVGIGNQETLHEKAVNNWIESTSLGSAFIHLVLNTQIPKQENFLNPLIQEVN FNNVAANAVNDLLSITNNFSTSSVYYNLSSYLVESKEGVDYFCGGFFEFLCAFAKEREYILRDINSCYRAQAFGNALLAR IEAMAAGNKVTAAQANNMRTQTNLYLAFIRIIVEQLSVLDSLLRSLNYQPLQKDGNYDKDKYEIKGPTDWISTLASLEGY VVNGFDSASPSGGLGPMHTLVQTDQHDYLTQSQTQQLNLQNQMTNIQQEWTLVSTSLQVLNGILSHLAGEIYSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97113; Mature: 96982
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYYLNFRPNTVSGEGLFKIKLTNPCSDFKNRAKPAIDIEELNSGLYILRRLSVALEAG CCCEEEEECCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCC YLGVGSVINPDNKIFPGGEGIVRRFQEGSVLSSRTISGNTVADIKQSTAKTLVTTISDGL CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NTLIEDIPELPMTQVGSISAALILMETYKSKPSLNETEQTTVFGNAYVPSDESIKAIIKK HHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH EMEQEIQEKKDLIITAQLTAQGASDQAIEESLRDYEEFYVSEYFNTHVKEDLWKYRATIG HHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANIQEMLEKCSALGPDIPTSLTKDNVKEANAKSVLKAWMEAFSNVLEVEPALGGSQEIIE CCHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AVLKMIPYATKTTLTDEDIHKIYEQAALPSPEVMDYYLTKQEAGICKGAVVKAFQQATQN HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LQAVRADVKENIEELEIKKTSFQQAQASLESMLEGVKRLNDNKAFTSVRLASVMECYSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MALSQMSNVLETNGKTLITEYVNRFLQLNNTNTAQTLAHVISYMAAYCEVAECTMATTFL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQTEVIPYVNNKFQELQQQPFCATLASPGVAELMKNYIDFTNGICKANFSNFVDNVITKD CCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC LDLSAAANQAQAMLGEFQKKAEEYLNTFQTEIDNLNKVYNELDPAKATFNVGIGNQETLH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH EKAVNNWIESTSLGSAFIHLVLNTQIPKQENFLNPLIQEVNFNNVAANAVNDLLSITNNF HHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC STSSVYYNLSSYLVESKEGVDYFCGGFFEFLCAFAKEREYILRDINSCYRAQAFGNALLA CCHHHEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIEAMAAGNKVTAAQANNMRTQTNLYLAFIRIIVEQLSVLDSLLRSLNYQPLQKDGNYDK HHHHHHCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DKYEIKGPTDWISTLASLEGYVVNGFDSASPSGGLGPMHTLVQTDQHDYLTQSQTQQLNL CCEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH QNQMTNIQQEWTLVSTSLQVLNGILSHLAGEIYSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSYYLNFRPNTVSGEGLFKIKLTNPCSDFKNRAKPAIDIEELNSGLYILRRLSVALEAG CCEEEEECCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHCC YLGVGSVINPDNKIFPGGEGIVRRFQEGSVLSSRTISGNTVADIKQSTAKTLVTTISDGL CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH NTLIEDIPELPMTQVGSISAALILMETYKSKPSLNETEQTTVFGNAYVPSDESIKAIIKK HHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH EMEQEIQEKKDLIITAQLTAQGASDQAIEESLRDYEEFYVSEYFNTHVKEDLWKYRATIG HHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ANIQEMLEKCSALGPDIPTSLTKDNVKEANAKSVLKAWMEAFSNVLEVEPALGGSQEIIE CCHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AVLKMIPYATKTTLTDEDIHKIYEQAALPSPEVMDYYLTKQEAGICKGAVVKAFQQATQN HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LQAVRADVKENIEELEIKKTSFQQAQASLESMLEGVKRLNDNKAFTSVRLASVMECYSGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH MALSQMSNVLETNGKTLITEYVNRFLQLNNTNTAQTLAHVISYMAAYCEVAECTMATTFL HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQTEVIPYVNNKFQELQQQPFCATLASPGVAELMKNYIDFTNGICKANFSNFVDNVITKD CCCCCCCHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC LDLSAAANQAQAMLGEFQKKAEEYLNTFQTEIDNLNKVYNELDPAKATFNVGIGNQETLH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH EKAVNNWIESTSLGSAFIHLVLNTQIPKQENFLNPLIQEVNFNNVAANAVNDLLSITNNF HHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC STSSVYYNLSSYLVESKEGVDYFCGGFFEFLCAFAKEREYILRDINSCYRAQAFGNALLA CCHHHEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIEAMAAGNKVTAAQANNMRTQTNLYLAFIRIIVEQLSVLDSLLRSLNYQPLQKDGNYDK HHHHHHCCCCEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DKYEIKGPTDWISTLASLEGYVVNGFDSASPSGGLGPMHTLVQTDQHDYLTQSQTQQLNL CCEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHH QNQMTNIQQEWTLVSTSLQVLNGILSHLAGEIYSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA