Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

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Identifier: 15835508

GI number: 15835508

Start: 1037164

End: 1038396

Strand: Reverse

Name: Not Available

Synonym: TC0894

Alternate gene names: 15835508

Gene position: 1038396-1037164 (Counterclockwise)

Preceding gene: 15835510

Following gene: 15835507

Centisome position: 96.78

GC content: 40.96

Gene sequence:

>1233_bases
ATGAAGGTAGTCTGCAAGCTTGTAATGGTTGCTTTGTTATTCCCTAGTATGGGGCATGCTCTTGTTCAGGTTGGATTGGA
ACGCATTTTTCAAGAAGAGAAATACCTGGAAAAAATCCGAGGTAAGCGAATTGCTTTAATCTCTCATAGCGCAGCAATCA
ACCAACAAGGAGAGCATTCGCTTTGCGTGTTTGATCAACATAAAGGAATCTGTAAACTAAGTGCTTTGTGTACATTGGAA
CATGGTTATTTTGGAGCATCCATTGCTGAGACCCCGGGATACGATCCTGTATTAGCGGGTATTCATGTAGTTTCTCTTTT
TTCGTCTAAAGAAATCCCCTCTGAAGTCATTGAGGCCTGTGATGTTTTTGTGTATGACGTCCAAGATATTGGTGTGCGTT
CTTATTCGTTTATTTCAGCGTTATTACAGGTAGTAAAGGCGTCAGCGAGTAGTAATAAAGAGTTAATCGTTTTAGATCGT
CCTAATCCTATGGGAGGGGACATGGTCGATGGTCCTTTACCAGATAAAGAGGCTTTACCTGCTATTCCCTATTGTTATGG
GATGACTCCTGGTGAGCTCGCTTTGTTATATCGAGCATGGTATGCACCCAATGCCACTGTAACAGTCGTTCCTATGCAAG
GGTGGACTCGTTCTATGACTTTCGCTGATACGGGACGAATCTGGGTTCCTACAAGTCCTCAAGTTCCAGATGCCCAGTCT
GCTTATTTTTACGCGGCAACAGGAGTGATAGGGGCTTTATCGATCACAAATATAGGAATAGGGTATACGCTTCCTTTTAA
GGTTCTAGGTGCTCCATGGATCGATGGACATAAGGTAGCTCAAGAGTTGAATAAGGCTAAGCTTCCAGGAGTAAAATTCC
TTCCTTTTATGTATGAGCCGTTTTTTGGTAAATTTAAAATGGAGATTTGCTCTGGGGTATTATTAGTACTTCAGGATCCC
AAAACATTTCTTCCTATGGAAACGCAAAGCGTTATTTTAGGAGTTTTAAAAATGCTATATCCTAAAGAAGTTGAACAAGC
ATTTCTATTACTGGATAGGCTAGCTCCTAGACGTAAGGCGATCCAAACTCTATTGGGGCGTTCAGAATTTTTGAATGTTT
GTTTGCAAAAACAATATGTTACGTGGCCTTTACGGACTATGTGTGTTGAAGGAAGAAAACAATTTAAAGAAGCTAGGAAA
CCATTCCTACTTGCAGAATATACCCAACAGTAA

Upstream 100 bases:

>100_bases
CTTTTTGTATTTTAAGAGATTTCTAACGGGGTTGCTATGGATCAAAAAGGCGGAAACGGGGAAGATAAGTTTTTTCGGAA
GAAGAAATTTAAGAGAGGTT

Downstream 100 bases:

>100_bases
TGAGAGGTATGTTTGACAAGAATAAATAGCATTTCTATATCCGAGACAAAATACTGCATCTGATAGAGGAGCTGGGTGTG
GCCAATAGCTTTCGTAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHSLCVFDQHKGICKLSALCTLE
HGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEACDVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDR
PNPMGGDMVDGPLPDKEALPAIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS
AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEPFFGKFKMEICSGVLLVLQDP
KTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKAIQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARK
PFLLAEYTQQ

Sequences:

>Translated_410_residues
MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHSLCVFDQHKGICKLSALCTLE
HGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEACDVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDR
PNPMGGDMVDGPLPDKEALPAIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS
AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEPFFGKFKMEICSGVLLVLQDP
KTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKAIQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARK
PFLLAEYTQQ
>Mature_410_residues
MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHSLCVFDQHKGICKLSALCTLE
HGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEACDVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDR
PNPMGGDMVDGPLPDKEALPAIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS
AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEPFFGKFKMEICSGVLLVLQDP
KTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKAIQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARK
PFLLAEYTQQ

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 45537; Mature: 45537

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHS
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCC
LCVFDQHKGICKLSALCTLEHGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEAC
EEEEECCCCCEEHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
DVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDRPNPMGGDMVDGPLPDKEALP
HEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
AIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS
CCCHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCC
AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEP
CEEEEHHHHHHHHHHEECCCCEECCHHHHCCCCCCHHHHHHHHHHHCCCCCEECHHHHCC
FFGKFKMEICSGVLLVLQDPKTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKA
HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHH
IQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARKPFLLAEYTQQ
HHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC
>Mature Secondary Structure
MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHS
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCC
LCVFDQHKGICKLSALCTLEHGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEAC
EEEEECCCCCEEHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
DVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDRPNPMGGDMVDGPLPDKEALP
HEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
AIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS
CCCHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCC
AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEP
CEEEEHHHHHHHHHHEECCCCEECCHHHHCCCCCCHHHHHHHHHHHCCCCCEECHHHHCC
FFGKFKMEICSGVLLVLQDPKTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKA
HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHH
IQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARKPFLLAEYTQQ
HHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]