| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835508
GI number: 15835508
Start: 1037164
End: 1038396
Strand: Reverse
Name: Not Available
Synonym: TC0894
Alternate gene names: 15835508
Gene position: 1038396-1037164 (Counterclockwise)
Preceding gene: 15835510
Following gene: 15835507
Centisome position: 96.78
GC content: 40.96
Gene sequence:
>1233_bases ATGAAGGTAGTCTGCAAGCTTGTAATGGTTGCTTTGTTATTCCCTAGTATGGGGCATGCTCTTGTTCAGGTTGGATTGGA ACGCATTTTTCAAGAAGAGAAATACCTGGAAAAAATCCGAGGTAAGCGAATTGCTTTAATCTCTCATAGCGCAGCAATCA ACCAACAAGGAGAGCATTCGCTTTGCGTGTTTGATCAACATAAAGGAATCTGTAAACTAAGTGCTTTGTGTACATTGGAA CATGGTTATTTTGGAGCATCCATTGCTGAGACCCCGGGATACGATCCTGTATTAGCGGGTATTCATGTAGTTTCTCTTTT TTCGTCTAAAGAAATCCCCTCTGAAGTCATTGAGGCCTGTGATGTTTTTGTGTATGACGTCCAAGATATTGGTGTGCGTT CTTATTCGTTTATTTCAGCGTTATTACAGGTAGTAAAGGCGTCAGCGAGTAGTAATAAAGAGTTAATCGTTTTAGATCGT CCTAATCCTATGGGAGGGGACATGGTCGATGGTCCTTTACCAGATAAAGAGGCTTTACCTGCTATTCCCTATTGTTATGG GATGACTCCTGGTGAGCTCGCTTTGTTATATCGAGCATGGTATGCACCCAATGCCACTGTAACAGTCGTTCCTATGCAAG GGTGGACTCGTTCTATGACTTTCGCTGATACGGGACGAATCTGGGTTCCTACAAGTCCTCAAGTTCCAGATGCCCAGTCT GCTTATTTTTACGCGGCAACAGGAGTGATAGGGGCTTTATCGATCACAAATATAGGAATAGGGTATACGCTTCCTTTTAA GGTTCTAGGTGCTCCATGGATCGATGGACATAAGGTAGCTCAAGAGTTGAATAAGGCTAAGCTTCCAGGAGTAAAATTCC TTCCTTTTATGTATGAGCCGTTTTTTGGTAAATTTAAAATGGAGATTTGCTCTGGGGTATTATTAGTACTTCAGGATCCC AAAACATTTCTTCCTATGGAAACGCAAAGCGTTATTTTAGGAGTTTTAAAAATGCTATATCCTAAAGAAGTTGAACAAGC ATTTCTATTACTGGATAGGCTAGCTCCTAGACGTAAGGCGATCCAAACTCTATTGGGGCGTTCAGAATTTTTGAATGTTT GTTTGCAAAAACAATATGTTACGTGGCCTTTACGGACTATGTGTGTTGAAGGAAGAAAACAATTTAAAGAAGCTAGGAAA CCATTCCTACTTGCAGAATATACCCAACAGTAA
Upstream 100 bases:
>100_bases CTTTTTGTATTTTAAGAGATTTCTAACGGGGTTGCTATGGATCAAAAAGGCGGAAACGGGGAAGATAAGTTTTTTCGGAA GAAGAAATTTAAGAGAGGTT
Downstream 100 bases:
>100_bases TGAGAGGTATGTTTGACAAGAATAAATAGCATTTCTATATCCGAGACAAAATACTGCATCTGATAGAGGAGCTGGGTGTG GCCAATAGCTTTCGTAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHSLCVFDQHKGICKLSALCTLE HGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEACDVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDR PNPMGGDMVDGPLPDKEALPAIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEPFFGKFKMEICSGVLLVLQDP KTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKAIQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARK PFLLAEYTQQ
Sequences:
>Translated_410_residues MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHSLCVFDQHKGICKLSALCTLE HGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEACDVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDR PNPMGGDMVDGPLPDKEALPAIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEPFFGKFKMEICSGVLLVLQDP KTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKAIQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARK PFLLAEYTQQ >Mature_410_residues MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHSLCVFDQHKGICKLSALCTLE HGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEACDVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDR PNPMGGDMVDGPLPDKEALPAIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEPFFGKFKMEICSGVLLVLQDP KTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKAIQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARK PFLLAEYTQQ
Specific function: Unknown
COG id: COG3876
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008302 [H]
Pfam domain/function: PF07075 DUF1343 [H]
EC number: NA
Molecular weight: Translated: 45537; Mature: 45537
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHS CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCC LCVFDQHKGICKLSALCTLEHGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEAC EEEEECCCCCEEHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH DVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDRPNPMGGDMVDGPLPDKEALP HEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC AIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS CCCHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCC AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEP CEEEEHHHHHHHHHHEECCCCEECCHHHHCCCCCCHHHHHHHHHHHCCCCCEECHHHHCC FFGKFKMEICSGVLLVLQDPKTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKA HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHH IQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARKPFLLAEYTQQ HHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC >Mature Secondary Structure MKVVCKLVMVALLFPSMGHALVQVGLERIFQEEKYLEKIRGKRIALISHSAAINQQGEHS CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHCCCCCCCC LCVFDQHKGICKLSALCTLEHGYFGASIAETPGYDPVLAGIHVVSLFSSKEIPSEVIEAC EEEEECCCCCEEHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH DVFVYDVQDIGVRSYSFISALLQVVKASASSNKELIVLDRPNPMGGDMVDGPLPDKEALP HEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC AIPYCYGMTPGELALLYRAWYAPNATVTVVPMQGWTRSMTFADTGRIWVPTSPQVPDAQS CCCHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCCCCC AYFYAATGVIGALSITNIGIGYTLPFKVLGAPWIDGHKVAQELNKAKLPGVKFLPFMYEP CEEEEHHHHHHHHHHEECCCCEECCHHHHCCCCCCHHHHHHHHHHHCCCCCEECHHHHCC FFGKFKMEICSGVLLVLQDPKTFLPMETQSVILGVLKMLYPKEVEQAFLLLDRLAPRRKA HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHH IQTLLGRSEFLNVCLQKQYVTWPLRTMCVEGRKQFKEARKPFLLAEYTQQ HHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8011666; 9274029; 9384377 [H]