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Identifier: 15835503

GI number: 15835503

Start: 1033025

End: 1033633

Strand: Direct

Name: Not Available

Synonym: TC0889

Alternate gene names: 15835503

Gene position: 1033025-1033633 (Clockwise)

Preceding gene: 15835502

Following gene: 15835504

Centisome position: 96.28

GC content: 40.23

Gene sequence:

>609_bases
TTGTTGGGGCGCATTTCCTTCACAACACATAAAGAAAGCATCATGAGAAAGACTATTTTTAAAGCGTTTAATTTATTATT
ATCCCTTCTTTTCCTTTCTTCATGCTCTTATCCTTGTAGAGATTGGGAGCGCCATGGTTGCGATTCTGCAAGACCTCGCA
AATCATCTTTCGGATTCGTGCCTTTTTATTCTGATGAAGAAATTCAACAGGCCTTTGTTGAAGATTTTGATTCCAAAGAA
GAGCAACTTTACAAAACGAGCGCACAGAGCACTTCCTTCCGAAATATTACTTTCGCGACAGATAGTTATTCCATCAAAGG
AGAAGACAACCTGACTATTCTCGCAAGCTTAGTTCGTCATCTACGAAAATCTCCTAAAACTACCTTATATATCGAAGGGC
ATACTGATGAGCGTGGAGCAGCTGCGTATAATCTGGCTTTGGGAGCTCGTCGTGCGAATGCAGTGAAACAATATCTTATA
AAACAAGGTATTGCTTCCGACCGTTTATTTACTATTTCCTATGGTAAAGAGCATCCCGTTCATTCGGGTCATAATGAACT
TGCCTGGCAACAAAATCGTCGTACTGAATTTAAGATCCATGCTCGCTAA

Upstream 100 bases:

>100_bases
ATAGCGCCGGATCTTCCAGTACATCTGAACTATTCCTGCTGAGCCTAATTACCAAAAAAAGTAGGAAAATTGTTATAGGA
TCAGGAGAGAAACGTTTCCC

Downstream 100 bases:

>100_bases
TCGGTTATTTCTAATCACCCTTATAGGTTTTGGCTATTCTGCTTACGGTGCCAGCACAGGGAAATCACCTTCTTTACAGG
TTATTTTAGCTGAAGTCGAG

Product: peptidoglycan associated lipoprotein, putative

Products: NA

Alternate protein names: OMP P6; P6-like; Peptidoglycan-associated lipoprotein [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLGRISFTTHKESIMRKTIFKAFNLLLSLLFLSSCSYPCRDWERHGCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKE
EQLYKTSAQSTSFRNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQYLI
KQGIASDRLFTISYGKEHPVHSGHNELAWQQNRRTEFKIHAR

Sequences:

>Translated_202_residues
MLGRISFTTHKESIMRKTIFKAFNLLLSLLFLSSCSYPCRDWERHGCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKE
EQLYKTSAQSTSFRNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQYLI
KQGIASDRLFTISYGKEHPVHSGHNELAWQQNRRTEFKIHAR
>Mature_202_residues
MLGRISFTTHKESIMRKTIFKAFNLLLSLLFLSSCSYPCRDWERHGCDSARPRKSSFGFVPFYSDEEIQQAFVEDFDSKE
EQLYKTSAQSTSFRNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQYLI
KQGIASDRLFTISYGKEHPVHSGHNELAWQQNRRTEFKIHAR

Specific function: Thought to play a role in bacterial envelope integrity. Links the outer membrane to the peptidoglycan layer [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=100, Percent_Identity=44, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 23208; Mature: 23208

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRISFTTHKESIMRKTIFKAFNLLLSLLFLSSCSYPCRDWERHGCDSARPRKSSFGFV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC
PFYSDEEIQQAFVEDFDSKEEQLYKTSAQSTSFRNITFATDSYSIKGEDNLTILASLVRH
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHH
LRKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQYLIKQGIASDRLFTISYGKEHPV
HHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
HSGHNELAWQQNRRTEFKIHAR
CCCCCCHHECCCCCCCEEEECC
>Mature Secondary Structure
MLGRISFTTHKESIMRKTIFKAFNLLLSLLFLSSCSYPCRDWERHGCDSARPRKSSFGFV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCC
PFYSDEEIQQAFVEDFDSKEEQLYKTSAQSTSFRNITFATDSYSIKGEDNLTILASLVRH
CCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCEEECCCCCHHHHHHHHHH
LRKSPKTTLYIEGHTDERGAAAYNLALGARRANAVKQYLIKQGIASDRLFTISYGKEHPV
HHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
HSGHNELAWQQNRRTEFKIHAR
CCCCCCHHECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7868272; 11248100 [H]