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The map label for this gene is tolB

Identifier: 15835502

GI number: 15835502

Start: 1031790

End: 1033070

Strand: Direct

Name: tolB

Synonym: TC0888

Alternate gene names: 15835502

Gene position: 1031790-1033070 (Clockwise)

Preceding gene: 15835501

Following gene: 15835503

Centisome position: 96.16

GC content: 41.69

Gene sequence:

>1281_bases
GTGTTTCTCCGCTCTTTTCTCTGTCTACTCTGCTTACTCCCTTCTATTCTCTACTGTGCAGACTTAGAAATTCATGTTCG
AGCCGAATCTTCTCTTCTTCCAGTCAACGTCTCGTTACTATCTTCCCCGAAAGACACGAAACAAGGTTCTTATCTTGCGT
CTCTTCGTGACCTATTTGCTCGTGATTTAGCTTTAGGAGACCTTCTAGCTCCCACTAAAGAGATTGCCCCTCTAACTGTT
TTCATTGAGGCTTCGTATCCAGAACTGATTTTTTCCATCAAAAAGGATGGAAAAGGAGCGCAAAAAATTTTCTCTTTAGA
GCTTTCTGGGAACCCTTCTAAAGATCATCAATCTATTCATGAAGCTGCTGATCGCATTCACTTTCTTCTTACACACACTC
CTGGCATTAGCTCTGGAAAAATCATCTTCTCCCTATGCTCTACGAATTCTTCTGAAGAATTAAAACAAGGAGAGTTATGG
TCTGTAGATTATGATGGGCAGCATCTTGCCCCCCTTACTAATGAACATTCTTTATCCGTAACTCCCGCATGGATGCATAT
TAGTCATATTCCTGCCTATATTTATGTGTCGTATAAATTAGGGGTCCCTAAGATCTTCCTTAATACGCTTAGTCAACCTA
CAGGGAAAAAAATCTTGGCTATGCAAGGGAACCAATTTATGCCTGCCTTCTCTCCTAAAACTAAGCTTCTCGCTTTCATT
TCTGACCGAGATGGTAATCCCGATCTGTTTGTACAATCTTTTTCACTAGCTACAGGAGCAATCGGCACACCCAAAAAACT
TCTCAATGAAGCTTTCGGAACACAAGGGAACCCTTCTTTCAGTCCCGATGGCACACGCCTTGTTTTTGTTTCCAACAAAG
ATGGAACACCTCGTATCTATCAGATGCAAATTTACCCAGAACAACACCCTCCTCGTCTGCTGACAAAAAAATATCGAAAT
AGCAGTTGCCCAACATGGTCCCCTGATGGTAAAAAAATAGCCTTCTGCTCAGTTATTAAAGGTGTTCGTCAAATTTGTGT
GTATGATCTGGCTTCAGGGAGAGATGAGCAATTAACAACATCTGCAGAACATAAAGAAAGTCCTTCTTGGGCTGCGGATA
GCAACCACCTTGTTTATAGCGCCGGATCTTCCAGTACATCTGAACTATTCCTGCTGAGCCTAATTACCAAAAAAAGTAGG
AAAATTGTTATAGGATCAGGAGAGAAACGTTTCCCTTGTTGGGGCGCATTTCCTTCACAACACATAAAGAAAGCATCATG
A

Upstream 100 bases:

>100_bases
CAAATCCCTTTTCAAACCTTCTTTAATACATACAAACCCTCGAAAAATATCGTTTTTCATATTAGACTGCAGGGAAATTC
CGCTTGATAAAAGGTCTGTT

Downstream 100 bases:

>100_bases
GAAAGACTATTTTTAAAGCGTTTAATTTATTATTATCCCTTCTTTTCCTTTCTTCATGCTCTTATCCTTGTAGAGATTGG
GAGCGCCATGGTTGCGATTC

Product: translocation protein TolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MFLRSFLCLLCLLPSILYCADLEIHVRAESSLLPVNVSLLSSPKDTKQGSYLASLRDLFARDLALGDLLAPTKEIAPLTV
FIEASYPELIFSIKKDGKGAQKIFSLELSGNPSKDHQSIHEAADRIHFLLTHTPGISSGKIIFSLCSTNSSEELKQGELW
SVDYDGQHLAPLTNEHSLSVTPAWMHISHIPAYIYVSYKLGVPKIFLNTLSQPTGKKILAMQGNQFMPAFSPKTKLLAFI
SDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQGNPSFSPDGTRLVFVSNKDGTPRIYQMQIYPEQHPPRLLTKKYRN
SSCPTWSPDGKKIAFCSVIKGVRQICVYDLASGRDEQLTTSAEHKESPSWAADSNHLVYSAGSSSTSELFLLSLITKKSR
KIVIGSGEKRFPCWGAFPSQHIKKAS

Sequences:

>Translated_426_residues
MFLRSFLCLLCLLPSILYCADLEIHVRAESSLLPVNVSLLSSPKDTKQGSYLASLRDLFARDLALGDLLAPTKEIAPLTV
FIEASYPELIFSIKKDGKGAQKIFSLELSGNPSKDHQSIHEAADRIHFLLTHTPGISSGKIIFSLCSTNSSEELKQGELW
SVDYDGQHLAPLTNEHSLSVTPAWMHISHIPAYIYVSYKLGVPKIFLNTLSQPTGKKILAMQGNQFMPAFSPKTKLLAFI
SDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQGNPSFSPDGTRLVFVSNKDGTPRIYQMQIYPEQHPPRLLTKKYRN
SSCPTWSPDGKKIAFCSVIKGVRQICVYDLASGRDEQLTTSAEHKESPSWAADSNHLVYSAGSSSTSELFLLSLITKKSR
KIVIGSGEKRFPCWGAFPSQHIKKAS
>Mature_426_residues
MFLRSFLCLLCLLPSILYCADLEIHVRAESSLLPVNVSLLSSPKDTKQGSYLASLRDLFARDLALGDLLAPTKEIAPLTV
FIEASYPELIFSIKKDGKGAQKIFSLELSGNPSKDHQSIHEAADRIHFLLTHTPGISSGKIIFSLCSTNSSEELKQGELW
SVDYDGQHLAPLTNEHSLSVTPAWMHISHIPAYIYVSYKLGVPKIFLNTLSQPTGKKILAMQGNQFMPAFSPKTKLLAFI
SDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQGNPSFSPDGTRLVFVSNKDGTPRIYQMQIYPEQHPPRLLTKKYRN
SSCPTWSPDGKKIAFCSVIKGVRQICVYDLASGRDEQLTTSAEHKESPSWAADSNHLVYSAGSSSTSELFLLSLITKKSR
KIVIGSGEKRFPCWGAFPSQHIKKAS

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=298, Percent_Identity=26.510067114094, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR014167
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40 [H]

EC number: NA

Molecular weight: Translated: 46910; Mature: 46910

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLRSFLCLLCLLPSILYCADLEIHVRAESSLLPVNVSLLSSPKDTKQGSYLASLRDLFA
CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
RDLALGDLLAPTKEIAPLTVFIEASYPELIFSIKKDGKGAQKIFSLELSGNPSKDHQSIH
HHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHH
EAADRIHFLLTHTPGISSGKIIFSLCSTNSSEELKQGELWSVDYDGQHLAPLTNEHSLSV
HHHHHEEEEEEECCCCCCCCEEEEEECCCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEE
TPAWMHISHIPAYIYVSYKLGVPKIFLNTLSQPTGKKILAMQGNQFMPAFSPKTKLLAFI
CHHHEEHCCCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEECCCEECCCCCCCCEEEEEE
SDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQGNPSFSPDGTRLVFVSNKDGTPRIY
ECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEE
QMQIYPEQHPPRLLTKKYRNSSCPTWSPDGKKIAFCSVIKGVRQICVYDLASGRDEQLTT
EEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
SAEHKESPSWAADSNHLVYSAGSSSTSELFLLSLITKKSRKIVIGSGEKRFPCWGAFPSQ
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHH
HIKKAS
HHCCCC
>Mature Secondary Structure
MFLRSFLCLLCLLPSILYCADLEIHVRAESSLLPVNVSLLSSPKDTKQGSYLASLRDLFA
CCHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH
RDLALGDLLAPTKEIAPLTVFIEASYPELIFSIKKDGKGAQKIFSLELSGNPSKDHQSIH
HHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCHHHHHHH
EAADRIHFLLTHTPGISSGKIIFSLCSTNSSEELKQGELWSVDYDGQHLAPLTNEHSLSV
HHHHHEEEEEEECCCCCCCCEEEEEECCCCHHHHCCCCEEEECCCCCCCCCCCCCCCEEE
TPAWMHISHIPAYIYVSYKLGVPKIFLNTLSQPTGKKILAMQGNQFMPAFSPKTKLLAFI
CHHHEEHCCCCEEEEEEEECCCHHHHHHHCCCCCCCEEEEECCCEECCCCCCCCEEEEEE
SDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQGNPSFSPDGTRLVFVSNKDGTPRIY
ECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCEEE
QMQIYPEQHPPRLLTKKYRNSSCPTWSPDGKKIAFCSVIKGVRQICVYDLASGRDEQLTT
EEEECCCCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCC
SAEHKESPSWAADSNHLVYSAGSSSTSELFLLSLITKKSRKIVIGSGEKRFPCWGAFPSQ
CCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHH
HIKKAS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA