Definition Chlamydia muridarum Nigg, complete genome.
Accession NC_002620
Length 1,072,950

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15835501

GI number: 15835501

Start: 1031054

End: 1031776

Strand: Direct

Name: Not Available

Synonym: TC0887

Alternate gene names: NA

Gene position: 1031054-1031776 (Clockwise)

Preceding gene: 15835500

Following gene: 15835502

Centisome position: 96.1

GC content: 41.49

Gene sequence:

>723_bases
ATGACGAAATTTAAATATTCACCGTTTTTTTGCACTTCTGTAGCTGTACATATAGTTCTTGGAGGAATTCTATTTTTTTC
TTCTGCTCAAAAACCGAAACCTAAATTACATCCTTTTAAAGAACGGATCGTCCACTTACCTCCGGAACCGAAAATGACTT
GTCCAACGCAAACGCCTTCCGCTCCTTCTTCGCACCAAACATCAACCCCTCTACCCCCACCAAAAAAAGTAAATAATATT
CCTCCCCCAACAAGCAACAAGCCATCGAAAACTCCGCTAACTCATTTTCAATCAAGATCTCCCCACCCTCCAACCAAACC
AACCCCTTCAAGAGAAAAGCAACAGGCAACGTTAAAAAAACTGGCTCAGTTAGCTCACCAACTTGCAGAAGAAGCCGCAT
CTCAGGAAACCCATATCGCGCAACTCTCCTGGCCAACACAAGTGCAGGTCTCTACCGATACCGAATCTTGTCAACAAGAA
GCCTTTTGCGCGCTCTTTCAGCAATATGTTTGTCTGCCTTTTCCAGGAGAAGTCCGTATTAAACTTGAATTTTCTAAAGA
AGGCAGGCTCTTAATTTGCTCCATTCTATCTGCTATTAGCCCTACTGATAAACAACACATTATCAAGCAAATTCAGCAAA
TCCCTTTTCAAACCTTCTTTAATACATACAAACCCTCGAAAAATATCGTTTTTCATATTAGACTGCAGGGAAATTCCGCT
TGA

Upstream 100 bases:

>100_bases
TACAAGACGGTGATACAGCGTTTAAATTATACCAAGAAATCAAATCGATCATCGAAGAAGCCGGATTCCAAGAACTTCAT
ATTGCTTTGAAGAACTAGCT

Downstream 100 bases:

>100_bases
TAAAAGGTCTGTTGTGTTTCTCCGCTCTTTTCTCTGTCTACTCTGCTTACTCCCTTCTATTCTCTACTGTGCAGACTTAG
AAATTCATGTTCGAGCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTKFKYSPFFCTSVAVHIVLGGILFFSSAQKPKPKLHPFKERIVHLPPEPKMTCPTQTPSAPSSHQTSTPLPPPKKVNNI
PPPTSNKPSKTPLTHFQSRSPHPPTKPTPSREKQQATLKKLAQLAHQLAEEAASQETHIAQLSWPTQVQVSTDTESCQQE
AFCALFQQYVCLPFPGEVRIKLEFSKEGRLLICSILSAISPTDKQHIIKQIQQIPFQTFFNTYKPSKNIVFHIRLQGNSA

Sequences:

>Translated_240_residues
MTKFKYSPFFCTSVAVHIVLGGILFFSSAQKPKPKLHPFKERIVHLPPEPKMTCPTQTPSAPSSHQTSTPLPPPKKVNNI
PPPTSNKPSKTPLTHFQSRSPHPPTKPTPSREKQQATLKKLAQLAHQLAEEAASQETHIAQLSWPTQVQVSTDTESCQQE
AFCALFQQYVCLPFPGEVRIKLEFSKEGRLLICSILSAISPTDKQHIIKQIQQIPFQTFFNTYKPSKNIVFHIRLQGNSA
>Mature_239_residues
TKFKYSPFFCTSVAVHIVLGGILFFSSAQKPKPKLHPFKERIVHLPPEPKMTCPTQTPSAPSSHQTSTPLPPPKKVNNIP
PPTSNKPSKTPLTHFQSRSPHPPTKPTPSREKQQATLKKLAQLAHQLAEEAASQETHIAQLSWPTQVQVSTDTESCQQEA
FCALFQQYVCLPFPGEVRIKLEFSKEGRLLICSILSAISPTDKQHIIKQIQQIPFQTFFNTYKPSKNIVFHIRLQGNSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26881; Mature: 26750

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKFKYSPFFCTSVAVHIVLGGILFFSSAQKPKPKLHPFKERIVHLPPEPKMTCPTQTPS
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCC
APSSHQTSTPLPPPKKVNNIPPPTSNKPSKTPLTHFQSRSPHPPTKPTPSREKQQATLKK
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
LAQLAHQLAEEAASQETHIAQLSWPTQVQVSTDTESCQQEAFCALFQQYVCLPFPGEVRI
HHHHHHHHHHHHHCCHHEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE
KLEFSKEGRLLICSILSAISPTDKQHIIKQIQQIPFQTFFNTYKPSKNIVFHIRLQGNSA
EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
TKFKYSPFFCTSVAVHIVLGGILFFSSAQKPKPKLHPFKERIVHLPPEPKMTCPTQTPS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCC
APSSHQTSTPLPPPKKVNNIPPPTSNKPSKTPLTHFQSRSPHPPTKPTPSREKQQATLKK
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHH
LAQLAHQLAEEAASQETHIAQLSWPTQVQVSTDTESCQQEAFCALFQQYVCLPFPGEVRI
HHHHHHHHHHHHHCCHHEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEE
KLEFSKEGRLLICSILSAISPTDKQHIIKQIQQIPFQTFFNTYKPSKNIVFHIRLQGNSA
EEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA