| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835493
GI number: 15835493
Start: 1020211
End: 1023081
Strand: Reverse
Name: Not Available
Synonym: TC0879
Alternate gene names: NA
Gene position: 1023081-1020211 (Counterclockwise)
Preceding gene: 15835494
Following gene: 15835483
Centisome position: 95.35
GC content: 39.2
Gene sequence:
>2871_bases ATGTCTCGGTTGGACGTCTTTGTATTCGATTCCTTAGGTAACAAAGAGAAAGCCTCTTCTTTAGAGGAAATCTTATGTGG TGAAAATCCACAAGAGTTTGCTCAGTATAGCAGAGCTTCTTTAGCAAAGAAAAATCTTTCCATTGCGAGAAAGTTAGCCA GTTATATTCTGAATGATCAGGGAGATCTTGACCTTGGGAAGGTAGTTGAGTGTATTCAACTATTAACGAAATATCTGTAT CCTCTAGGGCCCCATCGTCAAGAAGAAGGCCCGGCTCGAGAGCATTTATTAAAGATGCTTGAGTTTTTGCATGATGACCA AGAAATTAAGAGCCGTTTGCGGCGTTTTTTTGTTCCCTCTTATGCTAAAGTCCAGGATTTAATTCGCAATACGTTAGCGC TTTCTACTGGAGAAACGCTAACAGTCCGTCATGTACGAGAAGCTGTTTTAGTCTCTTTATTTACTTATTTACGGCAAGAC GTTGGGTCTTGTTTCGCAACAGCATTAGCGATTCTTATCCATCAAGAATANCCACTCTTGTTTGTTCGTGATCTAGAAGA TTTACTATCTTCTGGGAAGATTTCCCGTATTATTGGTGATCAGGAAATTTCTGTTCCGATCAATCTTCTTCCTTCTGTAG GAGATTTATTTAAACCTATTCGTGTGATTGATTTATATCCTAATCCAGTAGCCACTCTTGCGTCTTGGTCGAATATTCAA GCAGCATTTGATGCCTCTGGAATATTCCCAAAAACAGCAGATATCTCTCAAGAAATTCAGACATTGCTAGCCAATGAAAG AGTGTATCAGAAAATACAAGATTTTCATGGGGAGATCACGGCTCATGATGTCATTCAGGATAGTTTATTACATTACTATC AAATTTCTCCTTCTGCGGTTCAATCTTCCATTTTACAAGAGGGTTTTCGTAATAGAAAGTGGGGTATGACTCCTGGAGCA TCTGTACTTTCTGCAAGTAGTCAACATGTGCTCAGTTACTTAGAATCTTATGAGCAGGCTACGCAAGGGTTTATTCGCGA TACACAGAACGTCTTGTTAAAATCATGGGAATACACATTAGCTACATTGGCAGATGCTAATCAAACAACAACGGTCAAGC ATTTACAAATCGCTTTAGGTTGGGATGCCCATGATGAATATGGATTATATGCAATTATCCGAAAATTTTTGGACGATGAG ATAAAAGTAACACACACTTTTGCAGGGCAGTGTGAGCAGACTTATCAAGAGGCAAAAGCCCAATTAGAATATGTAGAAAG TCGGATGCGTAATCCGATTAACAAACAAGACAGTCAGATTTTAGCGATGGATCATGTGCGATTTCGACAAGAGCTAAATC AGGCTTTGCAAGATTGGAATGCCGCTCAAGAAAAACTCAAGAAAATCATTACTTTACCAGACTTTCTCTTGTCTTTCTAT TCAAGGGAAATACCAGTGTATTTTCGCAGTATATATGATGCGTTTATCAGGGAATTTTCTGGTCATTACGCAGATGGTTC TGCCGGGTTCCGCATAGTATTTACTTATGGAAGAAGTCATCCAAACACCTGGGAGCCAATCTATTCTATCGAAGAATTTA TTCATGCTTTGACTGAGTTTTTCACCTCTACAGAGGGGGATCTTTTAGCGAAACATAATGTTTCTGGGTTGGAGAAAGAA ACATCCGTTCTTTTGCATCATATTGTATCAGCTTTACATGAACCCCGTTTTCAAGAAGCTGCAATGGAACGGATTCTTAA CGCTTATGATTGTCCGATTCCACAGGGAATTTTTCAGCATTTAGATCAAATTACGCATACCCCTTGGGTTTATGTTTCTG GAGGAACAGTAACGACGCTAGTAAGCAATTATTTTGAAAACAAACACACCTTATCTAAGCTAGAAAAACTTCCTGCCGAT CCGCATGAATTAGCAGCATTTTTTGCTGATGCGTTGAAAGATCTTCCCGAAGCTGTGAAAGAGTATTTAGAGGATGGAGA ACATTCTTTACTAGCAGCAACTCCTTCCCATGTATTTTCTGTAACAGCAGGTTCTCCTTTGTTTAGAGATGCTTGGACCA ATGATTGGTACAGCTACACCTGGTTACGAGATGTGTGGGTTTCTAAGCATCAAGCTTTTTTGAAGCATACGATTTTTGAC AAATCTGCGATTTACGCGTTTATCACACGCTTCTGTGCGCGCTATTATTTACAGGAATTGACACAAGAGTTTGTCTATTT TTGCGATGACCTATCACTATCCATTCCAGAGTTGTATGATAAAAGTGTGCGCTTTTTCCAATCAACCGTTCGAGAGGAAA AGGTTATAGCGACTTTACAAAGGTATTTAGCATATCAATTAGTAAAAGAAGCTCCTTATATTTCTGAACAGAGATTACCT GAGGTTATAAGAGACATTTCATCTTATTTAGGAATTTCATCGCGAATTTCTTATGATCGTTTTGCATCACTGTTAGAAGA GAATATAGAAAAGCATTCGTTAATATCCTCGTCAGAACTAAGACACTTGTATAAAGGTTTGTTAATGGCAGGGTATCAGC GTGTTTATCATGAAGAAGATCTGTCTATGCGTTTGATAGCTGCTATGCGTCATCATGGGTTGGCTTACCCTGCGCCTCTT CTTTTTGGAGATACGAATTGGGCTTATCGGTATTTTGGGTTTATTTTGCATCCTGGGACGCAGGAGATTGATTTATGGGA TTTTAACTATTTAGGATTAGCAGGGCGTCCTTCAGAAAATAAGGACAGGTGGTTTGGTCAAAATTCCTGGGTTCTTTATC CCAATCCTATAGATTATGGTATGGTTCCTCCTCCTGGATATCGTAGTGGGCTACCAAAAGGCTTTTTCTAA
Upstream 100 bases:
>100_bases AAGAACCAAAAGATTCTATAGATCCTGAGGTGTAAGTTTCGGAGATTGCATCGCAATTTTGTTCCATGGTAAAGGATGAG AAAAAACTCCTTTCTTTGCC
Downstream 100 bases:
>100_bases AAGAAAATGGTTTATTATCTAGTTTTAGATAAAAGAGAAGAAGCCCACAGCTCCATCAATCTGCGTTTGTTTTTTATGCT TGAGCATAGTTGTTAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 956; Mature: 955
Protein sequence:
>956_residues MSRLDVFVFDSLGNKEKASSLEEILCGENPQEFAQYSRASLAKKNLSIARKLASYILNDQGDLDLGKVVECIQLLTKYLY PLGPHRQEEGPAREHLLKMLEFLHDDQEIKSRLRRFFVPSYAKVQDLIRNTLALSTGETLTVRHVREAVLVSLFTYLRQD VGSCFATALAILIHQEXPLLFVRDLEDLLSSGKISRIIGDQEISVPINLLPSVGDLFKPIRVIDLYPNPVATLASWSNIQ AAFDASGIFPKTADISQEIQTLLANERVYQKIQDFHGEITAHDVIQDSLLHYYQISPSAVQSSILQEGFRNRKWGMTPGA SVLSASSQHVLSYLESYEQATQGFIRDTQNVLLKSWEYTLATLADANQTTTVKHLQIALGWDAHDEYGLYAIIRKFLDDE IKVTHTFAGQCEQTYQEAKAQLEYVESRMRNPINKQDSQILAMDHVRFRQELNQALQDWNAAQEKLKKIITLPDFLLSFY SREIPVYFRSIYDAFIREFSGHYADGSAGFRIVFTYGRSHPNTWEPIYSIEEFIHALTEFFTSTEGDLLAKHNVSGLEKE TSVLLHHIVSALHEPRFQEAAMERILNAYDCPIPQGIFQHLDQITHTPWVYVSGGTVTTLVSNYFENKHTLSKLEKLPAD PHELAAFFADALKDLPEAVKEYLEDGEHSLLAATPSHVFSVTAGSPLFRDAWTNDWYSYTWLRDVWVSKHQAFLKHTIFD KSAIYAFITRFCARYYLQELTQEFVYFCDDLSLSIPELYDKSVRFFQSTVREEKVIATLQRYLAYQLVKEAPYISEQRLP EVIRDISSYLGISSRISYDRFASLLEENIEKHSLISSSELRHLYKGLLMAGYQRVYHEEDLSMRLIAAMRHHGLAYPAPL LFGDTNWAYRYFGFILHPGTQEIDLWDFNYLGLAGRPSENKDRWFGQNSWVLYPNPIDYGMVPPPGYRSGLPKGFF
Sequences:
>Translated_956_residues MSRLDVFVFDSLGNKEKASSLEEILCGENPQEFAQYSRASLAKKNLSIARKLASYILNDQGDLDLGKVVECIQLLTKYLY PLGPHRQEEGPAREHLLKMLEFLHDDQEIKSRLRRFFVPSYAKVQDLIRNTLALSTGETLTVRHVREAVLVSLFTYLRQD VGSCFATALAILIHQEXPLLFVRDLEDLLSSGKISRIIGDQEISVPINLLPSVGDLFKPIRVIDLYPNPVATLASWSNIQ AAFDASGIFPKTADISQEIQTLLANERVYQKIQDFHGEITAHDVIQDSLLHYYQISPSAVQSSILQEGFRNRKWGMTPGA SVLSASSQHVLSYLESYEQATQGFIRDTQNVLLKSWEYTLATLADANQTTTVKHLQIALGWDAHDEYGLYAIIRKFLDDE IKVTHTFAGQCEQTYQEAKAQLEYVESRMRNPINKQDSQILAMDHVRFRQELNQALQDWNAAQEKLKKIITLPDFLLSFY SREIPVYFRSIYDAFIREFSGHYADGSAGFRIVFTYGRSHPNTWEPIYSIEEFIHALTEFFTSTEGDLLAKHNVSGLEKE TSVLLHHIVSALHEPRFQEAAMERILNAYDCPIPQGIFQHLDQITHTPWVYVSGGTVTTLVSNYFENKHTLSKLEKLPAD PHELAAFFADALKDLPEAVKEYLEDGEHSLLAATPSHVFSVTAGSPLFRDAWTNDWYSYTWLRDVWVSKHQAFLKHTIFD KSAIYAFITRFCARYYLQELTQEFVYFCDDLSLSIPELYDKSVRFFQSTVREEKVIATLQRYLAYQLVKEAPYISEQRLP EVIRDISSYLGISSRISYDRFASLLEENIEKHSLISSSELRHLYKGLLMAGYQRVYHEEDLSMRLIAAMRHHGLAYPAPL LFGDTNWAYRYFGFILHPGTQEIDLWDFNYLGLAGRPSENKDRWFGQNSWVLYPNPIDYGMVPPPGYRSGLPKGFF >Mature_955_residues SRLDVFVFDSLGNKEKASSLEEILCGENPQEFAQYSRASLAKKNLSIARKLASYILNDQGDLDLGKVVECIQLLTKYLYP LGPHRQEEGPAREHLLKMLEFLHDDQEIKSRLRRFFVPSYAKVQDLIRNTLALSTGETLTVRHVREAVLVSLFTYLRQDV GSCFATALAILIHQEXPLLFVRDLEDLLSSGKISRIIGDQEISVPINLLPSVGDLFKPIRVIDLYPNPVATLASWSNIQA AFDASGIFPKTADISQEIQTLLANERVYQKIQDFHGEITAHDVIQDSLLHYYQISPSAVQSSILQEGFRNRKWGMTPGAS VLSASSQHVLSYLESYEQATQGFIRDTQNVLLKSWEYTLATLADANQTTTVKHLQIALGWDAHDEYGLYAIIRKFLDDEI KVTHTFAGQCEQTYQEAKAQLEYVESRMRNPINKQDSQILAMDHVRFRQELNQALQDWNAAQEKLKKIITLPDFLLSFYS REIPVYFRSIYDAFIREFSGHYADGSAGFRIVFTYGRSHPNTWEPIYSIEEFIHALTEFFTSTEGDLLAKHNVSGLEKET SVLLHHIVSALHEPRFQEAAMERILNAYDCPIPQGIFQHLDQITHTPWVYVSGGTVTTLVSNYFENKHTLSKLEKLPADP HELAAFFADALKDLPEAVKEYLEDGEHSLLAATPSHVFSVTAGSPLFRDAWTNDWYSYTWLRDVWVSKHQAFLKHTIFDK SAIYAFITRFCARYYLQELTQEFVYFCDDLSLSIPELYDKSVRFFQSTVREEKVIATLQRYLAYQLVKEAPYISEQRLPE VIRDISSYLGISSRISYDRFASLLEENIEKHSLISSSELRHLYKGLLMAGYQRVYHEEDLSMRLIAAMRHHGLAYPAPLL FGDTNWAYRYFGFILHPGTQEIDLWDFNYLGLAGRPSENKDRWFGQNSWVLYPNPIDYGMVPPPGYRSGLPKGFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 109596; Mature: 109465
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLDVFVFDSLGNKEKASSLEEILCGENPQEFAQYSRASLAKKNLSIARKLASYILNDQ CCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDLDLGKVVECIQLLTKYLYPLGPHRQEEGPAREHLLKMLEFLHDDQEIKSRLRRFFVPS CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC YAKVQDLIRNTLALSTGETLTVRHVREAVLVSLFTYLRQDVGSCFATALAILIHQEXPLL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH FVRDLEDLLSSGKISRIIGDQEISVPINLLPSVGDLFKPIRVIDLYPNPVATLASWSNIQ HHHHHHHHHCCCCEEHHHCCCCCCCCHHHCCCHHHHHCCCEEEEECCCCHHHHHHHHHHH AAFDASGIFPKTADISQEIQTLLANERVYQKIQDFHGEITAHDVIQDSLLHYYQISPSAV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHH QSSILQEGFRNRKWGMTPGASVLSASSQHVLSYLESYEQATQGFIRDTQNVLLKSWEYTL HHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLADANQTTTVKHLQIALGWDAHDEYGLYAIIRKFLDDEIKVTHTFAGQCEQTYQEAKA HHHHCCCCCCHHHHEEEEECCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH QLEYVESRMRNPINKQDSQILAMDHVRFRQELNQALQDWNAAQEKLKKIITLPDFLLSFY HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SREIPVYFRSIYDAFIREFSGHYADGSAGFRIVFTYGRSHPNTWEPIYSIEEFIHALTEF CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH FTSTEGDLLAKHNVSGLEKETSVLLHHIVSALHEPRFQEAAMERILNAYDCPIPQGIFQH HCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH LDQITHTPWVYVSGGTVTTLVSNYFENKHTLSKLEKLPADPHELAAFFADALKDLPEAVK HHHHCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EYLEDGEHSLLAATPSHVFSVTAGSPLFRDAWTNDWYSYTWLRDVWVSKHQAFLKHTIFD HHHHCCCCEEEEECCCHHEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KSAIYAFITRFCARYYLQELTQEFVYFCDDLSLSIPELYDKSVRFFQSTVREEKVIATLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYLAYQLVKEAPYISEQRLPEVIRDISSYLGISSRISYDRFASLLEENIEKHSLISSSEL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH RHLYKGLLMAGYQRVYHEEDLSMRLIAAMRHHGLAYPAPLLFGDTNWAYRYFGFILHPGT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHEECCCC QEIDLWDFNYLGLAGRPSENKDRWFGQNSWVLYPNPIDYGMVPPPGYRSGLPKGFF CCEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLDVFVFDSLGNKEKASSLEEILCGENPQEFAQYSRASLAKKNLSIARKLASYILNDQ CCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDLDLGKVVECIQLLTKYLYPLGPHRQEEGPAREHLLKMLEFLHDDQEIKSRLRRFFVPS CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC YAKVQDLIRNTLALSTGETLTVRHVREAVLVSLFTYLRQDVGSCFATALAILIHQEXPLL HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH FVRDLEDLLSSGKISRIIGDQEISVPINLLPSVGDLFKPIRVIDLYPNPVATLASWSNIQ HHHHHHHHHCCCCEEHHHCCCCCCCCHHHCCCHHHHHCCCEEEEECCCCHHHHHHHHHHH AAFDASGIFPKTADISQEIQTLLANERVYQKIQDFHGEITAHDVIQDSLLHYYQISPSAV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHH QSSILQEGFRNRKWGMTPGASVLSASSQHVLSYLESYEQATQGFIRDTQNVLLKSWEYTL HHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATLADANQTTTVKHLQIALGWDAHDEYGLYAIIRKFLDDEIKVTHTFAGQCEQTYQEAKA HHHHCCCCCCHHHHEEEEECCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH QLEYVESRMRNPINKQDSQILAMDHVRFRQELNQALQDWNAAQEKLKKIITLPDFLLSFY HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SREIPVYFRSIYDAFIREFSGHYADGSAGFRIVFTYGRSHPNTWEPIYSIEEFIHALTEF CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH FTSTEGDLLAKHNVSGLEKETSVLLHHIVSALHEPRFQEAAMERILNAYDCPIPQGIFQH HCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHH LDQITHTPWVYVSGGTVTTLVSNYFENKHTLSKLEKLPADPHELAAFFADALKDLPEAVK HHHHCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH EYLEDGEHSLLAATPSHVFSVTAGSPLFRDAWTNDWYSYTWLRDVWVSKHQAFLKHTIFD HHHHCCCCEEEEECCCHHEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KSAIYAFITRFCARYYLQELTQEFVYFCDDLSLSIPELYDKSVRFFQSTVREEKVIATLQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYLAYQLVKEAPYISEQRLPEVIRDISSYLGISSRISYDRFASLLEENIEKHSLISSSEL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHH RHLYKGLLMAGYQRVYHEEDLSMRLIAAMRHHGLAYPAPLLFGDTNWAYRYFGFILHPGT HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHEECCCC QEIDLWDFNYLGLAGRPSENKDRWFGQNSWVLYPNPIDYGMVPPPGYRSGLPKGFF CCEEEECCCEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA