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Identifier: 15835486

GI number: 15835486

Start: 1010206

End: 1010994

Strand: Direct

Name: Not Available

Synonym: TC0872

Alternate gene names: NA

Gene position: 1010206-1010994 (Clockwise)

Preceding gene: 15835485

Following gene: 15835487

Centisome position: 94.15

GC content: 39.8

Gene sequence:

>789_bases
ATGGGAAACATCAAAACCCTTCTAGAAAATCGCTTTAAAAAACCCACCTCCGATAAAATGGAGTCTCTCGCTAAAAAGCG
ATTGGAGGGAGAGCTTTCTCCTTTTCTAAATGGGTTTACGAATCCTAAGCTCTCTTCGCAAGAAGAAGCCAAATTTCGTC
AATTACTCGAAGAGTATTCCTTTTCTAACGAAATCTCTAAACACGATCTACAACAACTTTGTCATTTATCTGCTCAAGTA
AAACAGATCCATCATCAAGCAGTACTTCTCCATGGCGAACGAATCAAAAAAGTTCGAGAATTATTAACATCTTATCGGGA
AGGAGCGTTCTCTGCATGGCTGTTGCTTACCTATGGCAATCGACAAACTCCTTATAATTTCTTAGTATATTACGAACTCT
TCTCCACTCTCCCGGATTCTTTGAAGCTCGAACTAGAAAAATTACCCAGACAAGCTGTCTATACACTAGCTGCTCGAGAA
GGAACTCAAGAGAAGAAAGAGGCGATCATCCGTAATTATCAAGGAGAAACTAAAGGTGAACTTCTTGAAATTATCCGCAA
AGAATTCCCTCTACTCCCTACAGATCGACGCCACACCCCACTTTCCCAAAAGGCTTTTACTCTTCTTGCTAAAGGCACGA
AATTACTGCGACAATGCACCGACGTTTCTCACGAAGAACTCATTGCCTTGGAGAAATTGATTAAAAAGTTACAAAAAGTT
ACAACTAACCTTCTTTCTAACACTAAGGTGTCCCGAAATGACAACGAAATCCAAAACTCTAGAAATTGA

Upstream 100 bases:

>100_bases
GGGAAACCTGTCTTCTCAACAGCTCCTTCAGCTCGAGCCTCGGAAGACTATCTAAAATTAACTGAAGAACTGCTATTTTT
GTTAAGGGACATCTAACGTT

Downstream 100 bases:

>100_bases
TAACAACACGTTCCTACTTTTAGAAGGTAACTTAAAAAGAATTTTTGCTACTCCTATTGGGTATACGACATTTAGAGAAT
TCCAAAATGTGATATTTAAC

Product: virulence protein pGP6-D-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MGNIKTLLENRFKKPTSDKMESLAKKRLEGELSPFLNGFTNPKLSSQEEAKFRQLLEEYSFSNEISKHDLQQLCHLSAQV
KQIHHQAVLLHGERIKKVRELLTSYREGAFSAWLLLTYGNRQTPYNFLVYYELFSTLPDSLKLELEKLPRQAVYTLAARE
GTQEKKEAIIRNYQGETKGELLEIIRKEFPLLPTDRRHTPLSQKAFTLLAKGTKLLRQCTDVSHEELIALEKLIKKLQKV
TTNLLSNTKVSRNDNEIQNSRN

Sequences:

>Translated_262_residues
MGNIKTLLENRFKKPTSDKMESLAKKRLEGELSPFLNGFTNPKLSSQEEAKFRQLLEEYSFSNEISKHDLQQLCHLSAQV
KQIHHQAVLLHGERIKKVRELLTSYREGAFSAWLLLTYGNRQTPYNFLVYYELFSTLPDSLKLELEKLPRQAVYTLAARE
GTQEKKEAIIRNYQGETKGELLEIIRKEFPLLPTDRRHTPLSQKAFTLLAKGTKLLRQCTDVSHEELIALEKLIKKLQKV
TTNLLSNTKVSRNDNEIQNSRN
>Mature_261_residues
GNIKTLLENRFKKPTSDKMESLAKKRLEGELSPFLNGFTNPKLSSQEEAKFRQLLEEYSFSNEISKHDLQQLCHLSAQVK
QIHHQAVLLHGERIKKVRELLTSYREGAFSAWLLLTYGNRQTPYNFLVYYELFSTLPDSLKLELEKLPRQAVYTLAAREG
TQEKKEAIIRNYQGETKGELLEIIRKEFPLLPTDRRHTPLSQKAFTLLAKGTKLLRQCTDVSHEELIALEKLIKKLQKVT
TNLLSNTKVSRNDNEIQNSRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0137 (pGP6-D) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GP6R_CHLMU (Q9PJF7)

Other databases:

- EMBL:   AE002160
- PIR:   C81656
- RefSeq:   NP_297245.1
- GeneID:   1246240
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0872
- TIGR:   TC_0872
- HOGENOM:   HBG414127
- OMA:   PLISTDR
- ProtClustDB:   CLSK861678
- BioCyc:   CMUR243161:TC_0872-MONOMER
- InterPro:   IPR005350

Pfam domain/function: PF03677 UPF0137

EC number: NA

Molecular weight: Translated: 30355; Mature: 30224

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNIKTLLENRFKKPTSDKMESLAKKRLEGELSPFLNGFTNPKLSSQEEAKFRQLLEEYS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
FSNEISKHDLQQLCHLSAQVKQIHHQAVLLHGERIKKVRELLTSYREGAFSAWLLLTYGN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECC
RQTPYNFLVYYELFSTLPDSLKLELEKLPRQAVYTLAAREGTQEKKEAIIRNYQGETKGE
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH
LLEIIRKEFPLLPTDRRHTPLSQKAFTLLAKGTKLLRQCTDVSHEELIALEKLIKKLQKV
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TTNLLSNTKVSRNDNEIQNSRN
HHHHHHCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
GNIKTLLENRFKKPTSDKMESLAKKRLEGELSPFLNGFTNPKLSSQEEAKFRQLLEEYS
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
FSNEISKHDLQQLCHLSAQVKQIHHQAVLLHGERIKKVRELLTSYREGAFSAWLLLTYGN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECC
RQTPYNFLVYYELFSTLPDSLKLELEKLPRQAVYTLAAREGTQEKKEAIIRNYQGETKGE
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHH
LLEIIRKEFPLLPTDRRHTPLSQKAFTLLAKGTKLLRQCTDVSHEELIALEKLIKKLQKV
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TTNLLSNTKVSRNDNEIQNSRN
HHHHHHCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935