| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835483
GI number: 15835483
Start: 1005855
End: 1006811
Strand: Reverse
Name: Not Available
Synonym: TC0869
Alternate gene names: NA
Gene position: 1006811-1005855 (Counterclockwise)
Preceding gene: 15835493
Following gene: 15835478
Centisome position: 93.84
GC content: 40.02
Gene sequence:
>957_bases GTGATGTTAGTTTTGCGCTTTGCAAATCTATATGTAGAACCCATGGCTATTTTCTTAATTTTCCTTAACGCTTTTATTTG GTCTTCTTCGTTTGCTTTGAGCAAAAGCGCAATGGATGCTGCTTCGCCTTTATTCGTTACTGGAAGTCGAATGGTATTAG CGGGGATCGTTCTTTTTGGGCTTTTGTTATTCAAACGAGAGTCTTTCCGATTACCACGCCAGGCGGTTATGCCCATTGTG TTACTTTCTGTAATCGGATTTTATCTAACAAACGTTTTAGAGTTTATTGGATTACAAGGACTCTCTTCGTCTAAAGCATG TTTTATTTATGGATTTTCTCCTTTCACCGCAGCTTTTTGTTCTTATGTTCAACTTAGAGAAGTGGTTACTTGGAAGAAGT TGGGGGGATTAAGTTTAGGTTTAGTGAGTTATCTCGTATACCTGCTATTTGGAGGAGGAGAGGATGTATCAGAATGGGGA TGGCAGCTGGGGATGCCGGAGTTGTTATTGATCGTTGCTACATGTCTTTCTTCTTATGGGTGGACTTTGCTTAGAAAGTT AGAACGACAATGTGAGTCCTTGTCTATTACAGCTATTAATGCCTATGCTATGGTGATTGCGGGTATATTGTCATTAGCAC ATTCCGCGATTACTGAAGTCTGGAATCCTTTGCCCGTAGAGAATCCTGTCTTATTTTTGCAGTCGATAGGTGCTTTGGTG ATTTTTTCGAATCTGATTTGTTACAACTTATTTGCTAAGTTGCTGCGATCATTCTCCTCTACCTTTCTATCATTTTGTAA TTTAGTCATGCCGTTATTTGCGAGCTTTTTTGGCTGGTTACTGCTTGGAGAAAGTTTCCCTCCAGGATTATTATTTGCAG TAGGTTTCATGGTTTTAGGCTGTCGTTTGATTTACCATGAGGAATTCCGTCAGGGGTATGTTCTCTCTTCCGAGTAA
Upstream 100 bases:
>100_bases TTTTTCAAACTGGGGTTTTTTCAAGAGATCTTCTACAATAGAAGCTTATTTTTTAGCGCAGTGGCTAACCATACGAAACC GCTCTATTTGGTAGTGGGGT
Downstream 100 bases:
>100_bases AGAAAAACCGTAGGTGAAGAACACCTACGGTTTTTATAGAATCCAAAGAACACGTAATCTAAAAAGAAGATAGTTAGTTG AACATAGCTCCTGTTGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MMLVLRFANLYVEPMAIFLIFLNAFIWSSSFALSKSAMDAASPLFVTGSRMVLAGIVLFGLLLFKRESFRLPRQAVMPIV LLSVIGFYLTNVLEFIGLQGLSSSKACFIYGFSPFTAAFCSYVQLREVVTWKKLGGLSLGLVSYLVYLLFGGGEDVSEWG WQLGMPELLLIVATCLSSYGWTLLRKLERQCESLSITAINAYAMVIAGILSLAHSAITEVWNPLPVENPVLFLQSIGALV IFSNLICYNLFAKLLRSFSSTFLSFCNLVMPLFASFFGWLLLGESFPPGLLFAVGFMVLGCRLIYHEEFRQGYVLSSE
Sequences:
>Translated_318_residues MMLVLRFANLYVEPMAIFLIFLNAFIWSSSFALSKSAMDAASPLFVTGSRMVLAGIVLFGLLLFKRESFRLPRQAVMPIV LLSVIGFYLTNVLEFIGLQGLSSSKACFIYGFSPFTAAFCSYVQLREVVTWKKLGGLSLGLVSYLVYLLFGGGEDVSEWG WQLGMPELLLIVATCLSSYGWTLLRKLERQCESLSITAINAYAMVIAGILSLAHSAITEVWNPLPVENPVLFLQSIGALV IFSNLICYNLFAKLLRSFSSTFLSFCNLVMPLFASFFGWLLLGESFPPGLLFAVGFMVLGCRLIYHEEFRQGYVLSSE >Mature_318_residues MMLVLRFANLYVEPMAIFLIFLNAFIWSSSFALSKSAMDAASPLFVTGSRMVLAGIVLFGLLLFKRESFRLPRQAVMPIV LLSVIGFYLTNVLEFIGLQGLSSSKACFIYGFSPFTAAFCSYVQLREVVTWKKLGGLSLGLVSYLVYLLFGGGEDVSEWG WQLGMPELLLIVATCLSSYGWTLLRKLERQCESLSITAINAYAMVIAGILSLAHSAITEVWNPLPVENPVLFLQSIGALV IFSNLICYNLFAKLLRSFSSTFLSFCNLVMPLFASFFGWLLLGESFPPGLLFAVGFMVLGCRLIYHEEFRQGYVLSSE
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35317; Mature: 35317
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLVLRFANLYVEPMAIFLIFLNAFIWSSSFALSKSAMDAASPLFVTGSRMVLAGIVLFG CEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHH LLLFKRESFRLPRQAVMPIVLLSVIGFYLTNVLEFIGLQGLSSSKACFIYGFSPFTAAFC HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH SYVQLREVVTWKKLGGLSLGLVSYLVYLLFGGGEDVSEWGWQLGMPELLLIVATCLSSYG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH WTLLRKLERQCESLSITAINAYAMVIAGILSLAHSAITEVWNPLPVENPVLFLQSIGALV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IFSNLICYNLFAKLLRSFSSTFLSFCNLVMPLFASFFGWLLLGESFPPGLLFAVGFMVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CRLIYHEEFRQGYVLSSE HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMLVLRFANLYVEPMAIFLIFLNAFIWSSSFALSKSAMDAASPLFVTGSRMVLAGIVLFG CEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHH LLLFKRESFRLPRQAVMPIVLLSVIGFYLTNVLEFIGLQGLSSSKACFIYGFSPFTAAFC HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH SYVQLREVVTWKKLGGLSLGLVSYLVYLLFGGGEDVSEWGWQLGMPELLLIVATCLSSYG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHH WTLLRKLERQCESLSITAINAYAMVIAGILSLAHSAITEVWNPLPVENPVLFLQSIGALV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH IFSNLICYNLFAKLLRSFSSTFLSFCNLVMPLFASFFGWLLLGESFPPGLLFAVGFMVLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH CRLIYHEEFRQGYVLSSE HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA