| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835481
GI number: 15835481
Start: 1002965
End: 1004440
Strand: Direct
Name: Not Available
Synonym: TC0867
Alternate gene names: NA
Gene position: 1002965-1004440 (Clockwise)
Preceding gene: 15835480
Following gene: 15835482
Centisome position: 93.48
GC content: 45.6
Gene sequence:
>1476_bases ATGTCTCTTTCATCTTCTTCGTCTTCTGACAGCAACAATCTAAGAAGTGTCTTATCTCAAGTCATTACATCGACTCCTCA AGGCGTTCCTAATGCAGATAAGCTGACAGACAATCAGGTTAAACAGGTCCAACAGACTAGACAGAACCGAGACGACCTGA ACATGGAAAGCGATTCAGCTATTGCTGGAGCGGCTGGGAAGGATCGTGCATCCTCTGTTTCCCAAATGGAAGGCCAAGAG GTCATAGAACAGCAAGGATTAGCCGCTGGGAAGGAAACGGCCTCTGCAAGCACAGCATCGCTAACTCAGAACGCTTCCAC AGGAGCAGCTTCTCAAAAACGTGTAGAAGATACCAACAAATCTTTAGAACTATCCTCTTTAAGTTCCCTCTCCTCCGTAG ATGCGTCCCAACTACAAGAAATTCAGAACATTGTTGCTTCTGCAACGAGATCTACTAACGAGACTTCCCTAAAGAACTTA GATACTCCGGGACTACCCAAGCCTACAACGACGCCTCGCCAAGATGTTATGGAAATCAGCTTAGCTTTAGCGAAGGCAAT TACAGCCCTTGGAGAGTCTACGCAAGCAGCTTTGGAAAATTTCCAAAGCACGCAAACTCAAGCCTCCAATATGAACAAAA TGTCTCTGGAATCTCAAGGACTCAAAATCGACAAAGAACGAGAAGAGTTCCAAAAATTGCAAGAGATCCAGAAAAAAGCT GGCAACAACTCCACGATGGATACCGTTAACAAAGTGATGATTGGAGTGACTGTCGCTATCACTGTAGTTTCTGTTGTAGC AGCACTATTCACTTGCGGTCTTGGTTTAATCGGAACAGCAGCAGCAGGAGCTACAGCAGCAGCAGCGGGAGCCACAGCAG GGGCTACAGCAGCAGCAACGACAGCAACTTCTGTGGCAACAACAGTTGCGACCCAAGTTACGATGCAAGCAGTCATGCAA GCGGTTAAGCAAGCTATCATTCAAGGGGTCAAGCAGGCTATTGTCCAAGCGATTAAGCAAGGACTTAAAAAAGGGATCAT GCAAGCGATTAAACAGGCTATAAAAGCTGCTGTTAAAACTCTTACCAAAAATATTGGTAAAATTTTCAACACAGGGAAAA ATGCCGTTAGTAAATCCTTCCCTAACCTATCCAAAGTGATGAACACTCTGGGAAGTAAATGGGTAACATTAGGAGTTGGA GCACTGACAGCAGTTCCCCAACTCGTATCAGGGATTGGAAATCTGCAGCTATCTGACATGCAAAAAGATCTTGCTAAGAT TCAAAAAGAGGTCGGAGCTCTTACAGCCCAATCTGAAATGATGAAGGCGTTCACCTTGTTCTGGCAACAAGCAAGTAAGA TTGCTGCAAAACAAACCGAAAGCCCTAGCGAAACACAACAGCAAGCGGCCAAAACAGGAGCTCAAATAGCAAAAGCTTTG TCCGCAATAAGTGGCGCTCTAGCCGCCGCGGCTTAA
Upstream 100 bases:
>100_bases CATATTCCTAGGCTTAAGACACCTAACCGAAGCCGTAAATAAACACATTGCAGATGAGAAATAATTTTCTCATCTCATAA AGAGTTCCCAGAGAGGTTAT
Downstream 100 bases:
>100_bases CTATTAACTTTTTGATGGAGATTGTGTGTTATGACAACAGGAGTACGTGGAGATAATACTCCAGATCCCTCATTGTTAGC TCAACTCACCCAAAATGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MSLSSSSSSDSNNLRSVLSQVITSTPQGVPNADKLTDNQVKQVQQTRQNRDDLNMESDSAIAGAAGKDRASSVSQMEGQE VIEQQGLAAGKETASASTASLTQNASTGAASQKRVEDTNKSLELSSLSSLSSVDASQLQEIQNIVASATRSTNETSLKNL DTPGLPKPTTTPRQDVMEISLALAKAITALGESTQAALENFQSTQTQASNMNKMSLESQGLKIDKEREEFQKLQEIQKKA GNNSTMDTVNKVMIGVTVAITVVSVVAALFTCGLGLIGTAAAGATAAAAGATAGATAAATTATSVATTVATQVTMQAVMQ AVKQAIIQGVKQAIVQAIKQGLKKGIMQAIKQAIKAAVKTLTKNIGKIFNTGKNAVSKSFPNLSKVMNTLGSKWVTLGVG ALTAVPQLVSGIGNLQLSDMQKDLAKIQKEVGALTAQSEMMKAFTLFWQQASKIAAKQTESPSETQQQAAKTGAQIAKAL SAISGALAAAA
Sequences:
>Translated_491_residues MSLSSSSSSDSNNLRSVLSQVITSTPQGVPNADKLTDNQVKQVQQTRQNRDDLNMESDSAIAGAAGKDRASSVSQMEGQE VIEQQGLAAGKETASASTASLTQNASTGAASQKRVEDTNKSLELSSLSSLSSVDASQLQEIQNIVASATRSTNETSLKNL DTPGLPKPTTTPRQDVMEISLALAKAITALGESTQAALENFQSTQTQASNMNKMSLESQGLKIDKEREEFQKLQEIQKKA GNNSTMDTVNKVMIGVTVAITVVSVVAALFTCGLGLIGTAAAGATAAAAGATAGATAAATTATSVATTVATQVTMQAVMQ AVKQAIIQGVKQAIVQAIKQGLKKGIMQAIKQAIKAAVKTLTKNIGKIFNTGKNAVSKSFPNLSKVMNTLGSKWVTLGVG ALTAVPQLVSGIGNLQLSDMQKDLAKIQKEVGALTAQSEMMKAFTLFWQQASKIAAKQTESPSETQQQAAKTGAQIAKAL SAISGALAAAA >Mature_490_residues SLSSSSSSDSNNLRSVLSQVITSTPQGVPNADKLTDNQVKQVQQTRQNRDDLNMESDSAIAGAAGKDRASSVSQMEGQEV IEQQGLAAGKETASASTASLTQNASTGAASQKRVEDTNKSLELSSLSSLSSVDASQLQEIQNIVASATRSTNETSLKNLD TPGLPKPTTTPRQDVMEISLALAKAITALGESTQAALENFQSTQTQASNMNKMSLESQGLKIDKEREEFQKLQEIQKKAG NNSTMDTVNKVMIGVTVAITVVSVVAALFTCGLGLIGTAAAGATAAAAGATAGATAAATTATSVATTVATQVTMQAVMQA VKQAIIQGVKQAIVQAIKQGLKKGIMQAIKQAIKAAVKTLTKNIGKIFNTGKNAVSKSFPNLSKVMNTLGSKWVTLGVGA LTAVPQLVSGIGNLQLSDMQKDLAKIQKEVGALTAQSEMMKAFTLFWQQASKIAAKQTESPSETQQQAAKTGAQIAKALS AISGALAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50763; Mature: 50632
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSSSSSDSNNLRSVLSQVITSTPQGVPNADKLTDNQVKQVQQTRQNRDDLNMESDSA CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHCHHCCCCCCCCC IAGAAGKDRASSVSQMEGQEVIEQQGLAAGKETASASTASLTQNASTGAASQKRVEDTNK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCCCHHHHHHHHHCC SLELSSLSSLSSVDASQLQEIQNIVASATRSTNETSLKNLDTPGLPKPTTTPRQDVMEIS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH LALAKAITALGESTQAALENFQSTQTQASNMNKMSLESQGLKIDKEREEFQKLQEIQKKA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHC GNNSTMDTVNKVMIGVTVAITVVSVVAALFTCGLGLIGTAAAGATAAAAGATAGATAAAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHCCCCCCCHHHHH TATSVATTVATQVTMQAVMQAVKQAIIQGVKQAIVQAIKQGLKKGIMQAIKQAIKAAVKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTKNIGKIFNTGKNAVSKSFPNLSKVMNTLGSKWVTLGVGALTAVPQLVSGIGNLQLSDM HHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH QKDLAKIQKEVGALTAQSEMMKAFTLFWQQASKIAAKQTESPSETQQQAAKTGAQIAKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SAISGALAAAA HHHHHHHHHCC >Mature Secondary Structure SLSSSSSSDSNNLRSVLSQVITSTPQGVPNADKLTDNQVKQVQQTRQNRDDLNMESDSA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHCHHCCCCCCCCC IAGAAGKDRASSVSQMEGQEVIEQQGLAAGKETASASTASLTQNASTGAASQKRVEDTNK CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHCCCCCCCHHHHHHHHHCC SLELSSLSSLSSVDASQLQEIQNIVASATRSTNETSLKNLDTPGLPKPTTTPRQDVMEIS CCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH LALAKAITALGESTQAALENFQSTQTQASNMNKMSLESQGLKIDKEREEFQKLQEIQKKA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHC GNNSTMDTVNKVMIGVTVAITVVSVVAALFTCGLGLIGTAAAGATAAAAGATAGATAAAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHCCCCCCCHHHHH TATSVATTVATQVTMQAVMQAVKQAIIQGVKQAIVQAIKQGLKKGIMQAIKQAIKAAVKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTKNIGKIFNTGKNAVSKSFPNLSKVMNTLGSKWVTLGVGALTAVPQLVSGIGNLQLSDM HHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH QKDLAKIQKEVGALTAQSEMMKAFTLFWQQASKIAAKQTESPSETQQQAAKTGAQIAKAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SAISGALAAAA HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA