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The map label for this gene is sctT

Identifier: 15835467

GI number: 15835467

Start: 988594

End: 989463

Strand: Direct

Name: sctT

Synonym: TC0853

Alternate gene names: 15835467

Gene position: 988594-989463 (Clockwise)

Preceding gene: 15835466

Following gene: 15835479

Centisome position: 92.14

GC content: 40.0

Gene sequence:

>870_bases
ATGGCCACTCTACCTGATGTTCTTTCTGGACTAGGGTCTTCCTATATCGATTATATATTCCAGAAGCCTGCTGATTACGT
TTGGACCGTTTTCCTTCTACTTTCCGCTCGCATGTTATCCATACTTGCACTCGTTCCTTTCCTAGGAGCCAAACTCTTTC
CCTCACCTATTAAAATCGGCATCGCATTTTCTTGGATGGGAGTAATCTTTCCCAAAGTGATACAAGACACGACAATTGCT
CATTATCAAGATCTAGATATCTTTTATATTCTTCTAATTAAAGAGATTGTGATTGGAGTGTTAATTGGGTTCTTATTTTC
CTTTCCTTTTTATGCAGCCCAATCTGCAGGGTCCTTTATTACTAACCAACAAGGGATACAAGGATTAGAGGGAGCAACCT
CTCTTGTATCTATAGAACAAACTTCCCCTCACGGAATTTTTTACCATTATTTCGTGACTATAGTTTTCTGGCTGGTTGGA
GGACATCGTATTATCCTATCCGTGCTTTTACAGTCACTTGAGGTCATCCCTATTCATGCTGTCTTCCCTGAAGAGATGAT
GTCATTACGAGCTCCTATATGGATCGCTATATTAAAGATGTGTCAATTATGTCTGATTATGACCATACAGTTAAGCGCTC
CTGCAGCAGTGGCTATGCTTATGTCCGATTTATTCTTAGGAATCATCAACCGAATGGCTCCTCAAGTACAGGTGATCTAT
TTACTTTCTGCTCTTAAAGCTTTTCTAGGCCTGCTATTTCTAACCCTAGCCTGGTGGTTCATTGTGAAACAAATCGATTA
TTTCACTTTAGCATGGTTTAAAGAAATCCCTGTTATGCTCTTTGGAGCTCATCCTCCTAAAGTGCTTTGA

Upstream 100 bases:

>100_bases
TTTCGGAACGCTTATGATTACAGGCGGATGGTTGTGTAGTATGATTTTACGATTTGCGGCTCAAATTTTTACAAATTTTT
ACAAGTGGAAGTAGATCGCC

Downstream 100 bases:

>100_bases
TATGGAGAGGATTTTTCGGCAAAAAGAAACTCCCTCCTTACAAAAGAGGGAGTTTAGCCTTTAGATGAAAAATTTGTGTC
CTTAAAAAATCCTAACTTTT

Product: type III secretion inner membrane protein SctT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MATLPDVLSGLGSSYIDYIFQKPADYVWTVFLLLSARMLSILALVPFLGAKLFPSPIKIGIAFSWMGVIFPKVIQDTTIA
HYQDLDIFYILLIKEIVIGVLIGFLFSFPFYAAQSAGSFITNQQGIQGLEGATSLVSIEQTSPHGIFYHYFVTIVFWLVG
GHRIILSVLLQSLEVIPIHAVFPEEMMSLRAPIWIAILKMCQLCLIMTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIY
LLSALKAFLGLLFLTLAWWFIVKQIDYFTLAWFKEIPVMLFGAHPPKVL

Sequences:

>Translated_289_residues
MATLPDVLSGLGSSYIDYIFQKPADYVWTVFLLLSARMLSILALVPFLGAKLFPSPIKIGIAFSWMGVIFPKVIQDTTIA
HYQDLDIFYILLIKEIVIGVLIGFLFSFPFYAAQSAGSFITNQQGIQGLEGATSLVSIEQTSPHGIFYHYFVTIVFWLVG
GHRIILSVLLQSLEVIPIHAVFPEEMMSLRAPIWIAILKMCQLCLIMTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIY
LLSALKAFLGLLFLTLAWWFIVKQIDYFTLAWFKEIPVMLFGAHPPKVL
>Mature_288_residues
ATLPDVLSGLGSSYIDYIFQKPADYVWTVFLLLSARMLSILALVPFLGAKLFPSPIKIGIAFSWMGVIFPKVIQDTTIAH
YQDLDIFYILLIKEIVIGVLIGFLFSFPFYAAQSAGSFITNQQGIQGLEGATSLVSIEQTSPHGIFYHYFVTIVFWLVGG
HRIILSVLLQSLEVIPIHAVFPEEMMSLRAPIWIAILKMCQLCLIMTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIYL
LSALKAFLGLLFLTLAWWFIVKQIDYFTLAWFKEIPVMLFGAHPPKVL

Specific function: Part of a type III secretion system [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 32355; Mature: 32224

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC
>Mature Secondary Structure 
ATLPDVLSGLGSSYIDYIFQKPADYVWTVFLLLSARMLSILALVPFLGAKLFPSPIKIG
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IAFSWMGVIFPKVIQDTTIAHYQDLDIFYILLIKEIVIGVLIGFLFSFPFYAAQSAGSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TNQQGIQGLEGATSLVSIEQTSPHGIFYHYFVTIVFWLVGGHRIILSVLLQSLEVIPIHA
CCHHCCCCCCCHHHHEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCEEHH
VFPEEMMSLRAPIWIAILKMCQLCLIMTIQLSAPAAVAMLMSDLFLGIINRMAPQVQVIY
CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHH
LLSALKAFLGLLFLTLAWWFIVKQIDYFTLAWFKEIPVMLFGAHPPKVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]