| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835450
GI number: 15835450
Start: 971599
End: 972198
Strand: Direct
Name: Not Available
Synonym: TC0836
Alternate gene names: NA
Gene position: 971599-972198 (Clockwise)
Preceding gene: 15835449
Following gene: 15835451
Centisome position: 90.55
GC content: 38.67
Gene sequence:
>600_bases ATGGCTTTTTCGTACAAGCTTAGATTTTCCTGGTTAAACAGCCTTGTTTTTTGCGCATTTTTACTACCTTCCTGCGGCTA CACCGTAGTCTCTCCTTACAGAGTAGACAAGGAACTCTCTTTATCTAAAGGGATTTATATCTGCCCTATAGCAGAAGATT CATTAGGAGAGGTTGTTTCAGCTCTTTCTTATGAGTTAGAAAAACGCAACCTTAGAACACGATTGCATGAATCCTCAGCC GATTATGTACTCAAAGTCCTACTTTTCAATGAAACAGATGAAAACATCGGATTTGCTTTTACTCCTAAAAAACCAGGAGA ACAAACAGCAAAACACTTTATCGTCTCCAATGAAGGGCGTTTAGCTTTATCCGCAAAAGTACAGCTGATTAAAAAATGCT CTCAAGAAGTAGTAATAGAAAAGTGTTTGAGAGAGTCCGTTATCTTTGATTTTCAACCAGATCTAGGCACTGCGGATGCC CATCAGTTAGCTCTTGGGCAATTCGAGATGCATAATGAAGCAACAAAAAGTGCCCATCGTATTTTGTATTCAAAATTAGC AGAAACCATTGTACAGCAGGTATACTATGACCTTTTCTGA
Upstream 100 bases:
>100_bases TTACTCGATAGCATTGGAGAGTTTTCCAGAAACCTCTTATGTCGCTAAATGTAACAAACGATTGGAGCGGCTCTCTAAAC AAATTAGTTAAGCAAACAGA
Downstream 100 bases:
>100_bases AGGAGAACATGTTTTCCCTGCAATGTTACAAGAACTTTACACTATGCTCGATTTTGTAAAACGAGCTGGCTTTCGCTGTC ATTGTTCTAAAGAAAAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MAFSYKLRFSWLNSLVFCAFLLPSCGYTVVSPYRVDKELSLSKGIYICPIAEDSLGEVVSALSYELEKRNLRTRLHESSA DYVLKVLLFNETDENIGFAFTPKKPGEQTAKHFIVSNEGRLALSAKVQLIKKCSQEVVIEKCLRESVIFDFQPDLGTADA HQLALGQFEMHNEATKSAHRILYSKLAETIVQQVYYDLF
Sequences:
>Translated_199_residues MAFSYKLRFSWLNSLVFCAFLLPSCGYTVVSPYRVDKELSLSKGIYICPIAEDSLGEVVSALSYELEKRNLRTRLHESSA DYVLKVLLFNETDENIGFAFTPKKPGEQTAKHFIVSNEGRLALSAKVQLIKKCSQEVVIEKCLRESVIFDFQPDLGTADA HQLALGQFEMHNEATKSAHRILYSKLAETIVQQVYYDLF >Mature_198_residues AFSYKLRFSWLNSLVFCAFLLPSCGYTVVSPYRVDKELSLSKGIYICPIAEDSLGEVVSALSYELEKRNLRTRLHESSAD YVLKVLLFNETDENIGFAFTPKKPGEQTAKHFIVSNEGRLALSAKVQLIKKCSQEVVIEKCLRESVIFDFQPDLGTADAH QLALGQFEMHNEATKSAHRILYSKLAETIVQQVYYDLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22572; Mature: 22441
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSYKLRFSWLNSLVFCAFLLPSCGYTVVSPYRVDKELSLSKGIYICPIAEDSLGEVVS CCEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHCCCEEEEECCCHHHHHHHH ALSYELEKRNLRTRLHESSADYVLKVLLFNETDENIGFAFTPKKPGEQTAKHFIVSNEGR HHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCEEECCCCCCHHHHHHEEECCCCC LALSAKVQLIKKCSQEVVIEKCLRESVIFDFQPDLGTADAHQLALGQFEMHNEATKSAHR EEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILYSKLAETIVQQVYYDLF HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AFSYKLRFSWLNSLVFCAFLLPSCGYTVVSPYRVDKELSLSKGIYICPIAEDSLGEVVS CEEEEHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHCCCEEEEECCCHHHHHHHH ALSYELEKRNLRTRLHESSADYVLKVLLFNETDENIGFAFTPKKPGEQTAKHFIVSNEGR HHHHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCCCCEEECCCCCCHHHHHHEEECCCCC LALSAKVQLIKKCSQEVVIEKCLRESVIFDFQPDLGTADAHQLALGQFEMHNEATKSAHR EEHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ILYSKLAETIVQQVYYDLF HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA