| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835445
GI number: 15835445
Start: 963370
End: 964740
Strand: Direct
Name: Not Available
Synonym: TC0831
Alternate gene names: 15835445
Gene position: 963370-964740 (Clockwise)
Preceding gene: 15835440
Following gene: 15835446
Centisome position: 89.79
GC content: 42.01
Gene sequence:
>1371_bases ATGAATCTATGGACCAAAATTTTTCAGCCTCCTCGCCACATTAAAGAAATCAGTGATCCGGAGTTGGTTAAAAAGCAATA TAAATACTGGAGAGTGCGTATCTTTTACAGCATGTTTTTTGGTTACGTGTTCTTCTATTTTACAAGGAAAAGCTTTACCT TTGCTATGCCAACTCTAATTGCAGATCTTGGATTTGATAAGGCGCAACTAGGGATTATTGGCAGTACACTCTACATTACT TACGGCATTAGTAAATTTGTAAGCGGTGTGATGTCAGACCAATCCAACCCTCGCTATTTCATGGCGACCGGATTAATTAT TACTGGCCTCTCTAATATCTTCTTTGGCCTATCGTCTACCGTGCCTTTGTTTGTGCTGTTTTGGGGAATTAATGGTTGGT TCCAAGGATGGGGCTGGCCTCCTTGTGCACGTCTACTGACTCACTGGTATTCTAAATCAGAAAGAGGAACTTGGTGGAGC GTCTGGAGTACTTCTCACAATATTGGAGGAGCTTTAATCCCTGTTTTGACTGGAATCGCTATCGATTATGCAGGATGGCG AGGAGCTATGTTTATCCCAGGAATTATTTGCATTATCATGGGATTTATCTTAATTGACCGTTTGCGAGACACTCCACAAT CGCTAGGGCTTCCGGCTATAGAAAAGTTTAAAAAAGAAGACCTTTCTCATCCGCATGAGGAAACTACCGCGGATATTTTG GAAGAGGAGGCCGAAAGAGAGCTTTCCACTAAAGAAATTTTATTTACTTACGTGTTATCAAATAAATGGTTATGGTTCCT ATCCTTCGCTTCCTTCTTCATTTACGTAGTCCGCATGGCAGTGAACGATTGGAGCGCTCTTTATCTCATTGAGACAAAGA ATTATTCCACAGTAAAAGCGAATCTCTGCGTATCTTTGTTTGAAATTGGCGGATTATTTGGTATGCTATTAGCGGGCTGG TTATCCGACACCATTTCTAAAGGAAAGCGAGGGCCAATGAATGTAGTCTTCTCGCTGGGATTACTATTCTCTATCTTGGG ATTATGGGGAACTCATGATCGTTCTATATGGTGGGCAGATGGAGCATTTCTATTTATCATCGGCTTTTTCCTTTTTGGAC CACAAATGATGATCGGATTAGCAGCCGCAGAATTATCACATAAAAAAGCCGCTGGAACGGCCAGTGGTTTTACAGGATGG TTCGCCTATTTCGGAGCTGCTTTTGCTGGATATCCTCTAGGAAAAGTTGCCCAAGATTGGGGATGGCATGGATTCTTTGT TGCTCTCTTAGCCTGTGCTTTGATTGCACTCCTGTTCTTCTTGCCAACATGGAATGCATCCGAGCAGAGTTTAAGAAAAC ATAGTCACTAA
Upstream 100 bases:
>100_bases GCAAAAAACGAGGTCTTAGAAGCTGATACTTCCGTTGTAACACGCGTTTGTATTTTTCTTAAGCTTCTAGAGCAAACACA CTTGAATCGAGCGAACACCT
Downstream 100 bases:
>100_bases GTAAAGAGCTGTTTTGACCTGGATTCCTTTACATTGTCACTCTCAATACTCCATTCTGGATGCAACGTGCTCAATCAAAA AGTTTGTTGCTAAAGCTGTG
Product: GlpT/PgpT/UhpT family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MNLWTKIFQPPRHIKEISDPELVKKQYKYWRVRIFYSMFFGYVFFYFTRKSFTFAMPTLIADLGFDKAQLGIIGSTLYIT YGISKFVSGVMSDQSNPRYFMATGLIITGLSNIFFGLSSTVPLFVLFWGINGWFQGWGWPPCARLLTHWYSKSERGTWWS VWSTSHNIGGALIPVLTGIAIDYAGWRGAMFIPGIICIIMGFILIDRLRDTPQSLGLPAIEKFKKEDLSHPHEETTADIL EEEAERELSTKEILFTYVLSNKWLWFLSFASFFIYVVRMAVNDWSALYLIETKNYSTVKANLCVSLFEIGGLFGMLLAGW LSDTISKGKRGPMNVVFSLGLLFSILGLWGTHDRSIWWADGAFLFIIGFFLFGPQMMIGLAAAELSHKKAAGTASGFTGW FAYFGAAFAGYPLGKVAQDWGWHGFFVALLACALIALLFFLPTWNASEQSLRKHSH
Sequences:
>Translated_456_residues MNLWTKIFQPPRHIKEISDPELVKKQYKYWRVRIFYSMFFGYVFFYFTRKSFTFAMPTLIADLGFDKAQLGIIGSTLYIT YGISKFVSGVMSDQSNPRYFMATGLIITGLSNIFFGLSSTVPLFVLFWGINGWFQGWGWPPCARLLTHWYSKSERGTWWS VWSTSHNIGGALIPVLTGIAIDYAGWRGAMFIPGIICIIMGFILIDRLRDTPQSLGLPAIEKFKKEDLSHPHEETTADIL EEEAERELSTKEILFTYVLSNKWLWFLSFASFFIYVVRMAVNDWSALYLIETKNYSTVKANLCVSLFEIGGLFGMLLAGW LSDTISKGKRGPMNVVFSLGLLFSILGLWGTHDRSIWWADGAFLFIIGFFLFGPQMMIGLAAAELSHKKAAGTASGFTGW FAYFGAAFAGYPLGKVAQDWGWHGFFVALLACALIALLFFLPTWNASEQSLRKHSH >Mature_456_residues MNLWTKIFQPPRHIKEISDPELVKKQYKYWRVRIFYSMFFGYVFFYFTRKSFTFAMPTLIADLGFDKAQLGIIGSTLYIT YGISKFVSGVMSDQSNPRYFMATGLIITGLSNIFFGLSSTVPLFVLFWGINGWFQGWGWPPCARLLTHWYSKSERGTWWS VWSTSHNIGGALIPVLTGIAIDYAGWRGAMFIPGIICIIMGFILIDRLRDTPQSLGLPAIEKFKKEDLSHPHEETTADIL EEEAERELSTKEILFTYVLSNKWLWFLSFASFFIYVVRMAVNDWSALYLIETKNYSTVKANLCVSLFEIGGLFGMLLAGW LSDTISKGKRGPMNVVFSLGLLFSILGLWGTHDRSIWWADGAFLFIIGFFLFGPQMMIGLAAAELSHKKAAGTASGFTGW FAYFGAAFAGYPLGKVAQDWGWHGFFVALLACALIALLFFLPTWNASEQSLRKHSH
Specific function: Transport protein for sugar phosphate uptake
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family
Homologues:
Organism=Homo sapiens, GI256219598, Length=431, Percent_Identity=34.8027842227378, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI4503847, Length=431, Percent_Identity=34.8027842227378, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI256219483, Length=431, Percent_Identity=34.8027842227378, Blast_Score=248, Evalue=7e-66, Organism=Homo sapiens, GI256219543, Length=455, Percent_Identity=32.5274725274725, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI256219564, Length=357, Percent_Identity=31.9327731092437, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI46361976, Length=463, Percent_Identity=22.6781857451404, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI223717983, Length=403, Percent_Identity=26.7990074441687, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI38093649, Length=403, Percent_Identity=26.7990074441687, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI49619231, Length=400, Percent_Identity=24.5, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI14150047, Length=254, Percent_Identity=22.8346456692913, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI87082310, Length=440, Percent_Identity=47.5, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI1788573, Length=458, Percent_Identity=37.5545851528384, Blast_Score=310, Evalue=1e-85, Organism=Escherichia coli, GI2367259, Length=435, Percent_Identity=34.0229885057471, Blast_Score=210, Evalue=1e-55, Organism=Escherichia coli, GI1789152, Length=430, Percent_Identity=21.1627906976744, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI2367379, Length=330, Percent_Identity=22.7272727272727, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17542316, Length=456, Percent_Identity=23.9035087719298, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI133930953, Length=464, Percent_Identity=22.6293103448276, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17561094, Length=421, Percent_Identity=23.9904988123515, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI133901854, Length=481, Percent_Identity=21.8295218295218, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17539138, Length=297, Percent_Identity=25.5892255892256, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI133901856, Length=473, Percent_Identity=22.1987315010571, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17564202, Length=457, Percent_Identity=20.1312910284464, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17564204, Length=394, Percent_Identity=20.3045685279188, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24656866, Length=488, Percent_Identity=24.5901639344262, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI45550478, Length=488, Percent_Identity=24.5901639344262, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI24656861, Length=487, Percent_Identity=24.2299794661191, Blast_Score=112, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UHPT_CHLMU (Q9PJJ8)
Other databases:
- EMBL: AE002160 - PIR: G81660 - RefSeq: NP_297204.1 - ProteinModelPortal: Q9PJJ8 - GeneID: 1246199 - GenomeReviews: AE002160_GR - KEGG: cmu:TC0831 - TIGR: TC_0831 - HOGENOM: HBG559184 - OMA: QDANIAD - PhylomeDB: Q9PJJ8 - ProtClustDB: CLSK871435 - BioCyc: CMUR243161:TC_0831-MONOMER - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 - TIGRFAMs: TIGR00881
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 51652; Mature: 51652
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS00942 GLPT; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc111538)-; HASH(0x95e26e0)-; HASH(0xc924148)-; HASH(0x403b1450)-; HASH(0xd60e2ac)-; HASH(0xda97ce4)-; HASH(0xd3391a4)-; HASH(0xd637f7c)-; HASH(0xd4cb230)-; HASH(0xb6a400c)-; HASH(0xcd900d8)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLWTKIFQPPRHIKEISDPELVKKQYKYWRVRIFYSMFFGYVFFYFTRKSFTFAMPTLI CCCCHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ADLGFDKAQLGIIGSTLYITYGISKFVSGVMSDQSNPRYFMATGLIITGLSNIFFGLSST HHCCCCHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCH VPLFVLFWGINGWFQGWGWPPCARLLTHWYSKSERGTWWSVWSTSHNIGGALIPVLTGIA HHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHH IDYAGWRGAMFIPGIICIIMGFILIDRLRDTPQSLGLPAIEKFKKEDLSHPHEETTADIL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHH EEEAERELSTKEILFTYVLSNKWLWFLSFASFFIYVVRMAVNDWSALYLIETKNYSTVKA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHH NLCVSLFEIGGLFGMLLAGWLSDTISKGKRGPMNVVFSLGLLFSILGLWGTHDRSIWWAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC GAFLFIIGFFLFGPQMMIGLAAAELSHKKAAGTASGFTGWFAYFGAAFAGYPLGKVAQDW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHC GWHGFFVALLACALIALLFFLPTWNASEQSLRKHSH CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCH >Mature Secondary Structure MNLWTKIFQPPRHIKEISDPELVKKQYKYWRVRIFYSMFFGYVFFYFTRKSFTFAMPTLI CCCCHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ADLGFDKAQLGIIGSTLYITYGISKFVSGVMSDQSNPRYFMATGLIITGLSNIFFGLSST HHCCCCHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCH VPLFVLFWGINGWFQGWGWPPCARLLTHWYSKSERGTWWSVWSTSHNIGGALIPVLTGIA HHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHH IDYAGWRGAMFIPGIICIIMGFILIDRLRDTPQSLGLPAIEKFKKEDLSHPHEETTADIL HCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCCCCHHHHHHHH EEEAERELSTKEILFTYVLSNKWLWFLSFASFFIYVVRMAVNDWSALYLIETKNYSTVKA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHH NLCVSLFEIGGLFGMLLAGWLSDTISKGKRGPMNVVFSLGLLFSILGLWGTHDRSIWWAD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEC GAFLFIIGFFLFGPQMMIGLAAAELSHKKAAGTASGFTGWFAYFGAAFAGYPLGKVAQDW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHC GWHGFFVALLACALIALLFFLPTWNASEQSLRKHSH CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935