| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15835439
GI number: 15835439
Start: 956820
End: 957536
Strand: Reverse
Name: Not Available
Synonym: TC0825
Alternate gene names: NA
Gene position: 957536-956820 (Counterclockwise)
Preceding gene: 15835441
Following gene: 15835438
Centisome position: 89.24
GC content: 39.05
Gene sequence:
>717_bases ATGAATATTTCTGGAAGTATCAAACAAAAACTTCTCCAGTTTTTGAAAAAACAAAAATCCCCAGAATTGTTGGCAACGTA CTTGTTTTATTTAGAGCAGTCTTTGCATTTGAGTCCGGTTGTTTTTGTTCGGGACAAGGTCATTTTTAAAAGCGCAGAAG ATGCTATTGCGCTTTTAGAAGCGGATAAAAAGATCTGGAGAGAAACAGAGATTCAAATTTCTTCTGGGAAGCCAGAGGTG AATGAACAGACAAAGCGTATCTATATTTGTCCGTTTACTGGGAAAGTCTTTGCTGATAATGTCTATGCAAATCCTCTGGA TGCCGTTTATGACTGGCTTTCCTCTTGTCCTCAGAATAAAGAGAGACAGGCTGGTGTGGCTGTAAAGCGGTTTCTAGTAT CAGATGACCCCGAAGTAATCAGGGCATATATTGTCCCTCCGAAAGAACCTCTCATTAAAACTGTATATGCTTCCGCAATT ACGGGGAAGTTGTTCCATAGTTTGCCAACTCTCTTGGAAGATTTTAAAACTTCTTATTTACGTCCTATGACGCTTGAAGA AGTACAAAATCAGAACAAGTTTCAGTTAGAAAGCTCGTTTTTGACTTTATTGCAAGATGCTTTAGAGGAAGAAAAGATCG CTGAGTTTGTCGAAAGTCTTGCAGATGACACAGCGTTTCATGAGTACATTAGCCAATGGGTAGATACAGAAGAGTAA
Upstream 100 bases:
>100_bases GAACAGGGATATGGGCAAAGGCCTTTCTTTTTAGAAGAAAGCTGGTGATTAAAAGAAGAGTCAAGTTGCTGTTAAGCAGC TGAAAAAAGTAAGGATAAGT
Downstream 100 bases:
>100_bases CGGACTCTTGTGAAGAGACTATAGACTTAGCTGCAAAGCTCGGGCATCTCCTGATTCCCGGTATGGTTGTTTTATTATCT GGCGATTACGGCGCTGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKVIFKSAEDAIALLEADKKIWRETEIQISSGKPEV NEQTKRIYICPFTGKVFADNVYANPLDAVYDWLSSCPQNKERQAGVAVKRFLVSDDPEVIRAYIVPPKEPLIKTVYASAI TGKLFHSLPTLLEDFKTSYLRPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHEYISQWVDTEE
Sequences:
>Translated_238_residues MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKVIFKSAEDAIALLEADKKIWRETEIQISSGKPEV NEQTKRIYICPFTGKVFADNVYANPLDAVYDWLSSCPQNKERQAGVAVKRFLVSDDPEVIRAYIVPPKEPLIKTVYASAI TGKLFHSLPTLLEDFKTSYLRPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHEYISQWVDTEE >Mature_238_residues MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKVIFKSAEDAIALLEADKKIWRETEIQISSGKPEV NEQTKRIYICPFTGKVFADNVYANPLDAVYDWLSSCPQNKERQAGVAVKRFLVSDDPEVIRAYIVPPKEPLIKTVYASAI TGKLFHSLPTLLEDFKTSYLRPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHEYISQWVDTEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0658/CT_538/TC_0825 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27303; Mature: 27303
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKVIFKSAEDAIALLE CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADKKIWRETEIQISSGKPEVNEQTKRIYICPFTGKVFADNVYANPLDAVYDWLSSCPQNK HHHHHHHHHCEEECCCCCCCCCCCCEEEEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCH ERQAGVAVKRFLVSDDPEVIRAYIVPPKEPLIKTVYASAITGKLFHSLPTLLEDFKTSYL HHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHEYISQWVDTEE CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNISGSIKQKLLQFLKKQKSPELLATYLFYLEQSLHLSPVVFVRDKVIFKSAEDAIALLE CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH ADKKIWRETEIQISSGKPEVNEQTKRIYICPFTGKVFADNVYANPLDAVYDWLSSCPQNK HHHHHHHHHCEEECCCCCCCCCCCCEEEEECCCCCHHCCCCCCCHHHHHHHHHHHCCCCH ERQAGVAVKRFLVSDDPEVIRAYIVPPKEPLIKTVYASAITGKLFHSLPTLLEDFKTSYL HHHHHHHHHHHHHCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RPMTLEEVQNQNKFQLESSFLTLLQDALEEEKIAEFVESLADDTAFHEYISQWVDTEE CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]